ID: uc001bzd.1_intron_5_0_chr1_36102034_r.5p
GENE: (1)
chr1:36106743-36106992-


(3)
B-CELL
(3)
BRAIN
(1)
BREAST
(17)
CELL-LINE
(1)
CERVIX
(3)
HEART
(3)
LIVER
(1)
OTHER
(9)
SKIN

Sense strand
TGTCGCCTCCGACCGGGTGGCCGCCAGCAATATTGTCCAGATGAAGGACGGTGAGAGGAAGCAGGGGAGGCCCGGCCAGGCCTGGGGTGTAGGAGCGGCCAGAAGGAGTTTGTCGGGGGTTGAATAAGTACCAGGGAGGATCTGAGAGATGGAAGCCGGCCTGCCCTGCCCGTACTTATTTTATTTATTTATTTATTTTTTCGAGAGGGGTTTCGCTCTTGTTGTCCAGGCCGGAGTGCAATGGCGCGAT
...................................................................................................................................((((((((..(((............)))))).)))))..................................................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189785SRR189787SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTCG...............................................30165.0065.0011.0029.0013.00-11.001.00---------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTTG..............................................3149.000.0025.00-10.005.00-9.00---------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTTCG...............................................31132.0032.001.0015.007.00-9.00----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTTGG.............................................3213.000.00---7.00-6.00---------------------------------------
....................................................................................................................................................................................TTATTTATTTATTTATTTTTTCCTAA............................................2612.000.00-4.00--8.00----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTATG..............................................3111.000.007.00-4.00------------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTCTCG...............................................315.000.004.00-1.00------------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATCTTG..................................................275.000.002.00-1.00--2.00---------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTCCG...............................................304.000.003.00-1.00------------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTCG................................................294.000.001.00-2.00-1.00----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTACG..............................................313.000.001.00----2.00---------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTG...............................................303.000.001.001.00--1.00----------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTCTTG...............................................283.000.002.00-1.00------------------------------------------
.................................................................................................................................................................................ATTTTATTTATTTATTTATTTTCGGG...............................................263.000.00------3.00--------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTCTG..............................................312.000.001.00----1.00---------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTCTCG...............................................302.000.002.00--------------------------------------------
.................................................................................................................................................................................ATTTTATTTATTTATTTATTCATG.................................................242.000.001.00-1.00------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTCGGG...............................................282.000.00---1.00--1.00--------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTTCA...............................................3112.002.00-1.00--1.00----------------------------------------
..................................................................................................................................CCAGGGAGGATCTGAGAGATGGAAGCC.............................................................................................2712.002.00-----------2.00---------------------------------
..............................................................................................................................................................................................................................TGTCCAGGCCGGAGTGCAGTGT......222.000.00-------1.00--------------------------1.00----------
.......................................................................................................................................................................................TTTATTTATTTATTTTTTCGAGG............................................232.000.00------2.00--------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTCTCG................................................272.000.001.001.00-------------------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTTTTTG..............................................302.000.002.00--------------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTTCGG................................................262.000.00---2.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTATTG.................................................282.000.00-1.00--1.00----------------------------------------
........................................................................................................................................................................................TTATTTATTTATTTTTTCGAGATGA.........................................252.000.00------2.00--------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTTC................................................3012.002.00----2.00----------------------------------------
...........................................................................................................................................................................................................................TGTTGTCCAGGCCGGAGTGCAGAGG......252.000.00---2.00-----------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTC.................................................292.000.002.00--------------------------------------------
.....................................................................................................................................................................................TATTTATTTATTTATTTTTTCGAGTCGG.........................................282.000.00------2.00--------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATCTTG......................................................232.000.001.00-1.00------------------------------------------
.............................................................................................................................................................................................................................TTGTCCAGGCCGGAGTGCAGCGG......232.000.00---2.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTATG................................................291.000.001.00--------------------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTAAG..................................................261.000.00----1.00----------------------------------------
..........................................................................................................................................................................................ATTTATTTATTTTTTCGAGGGCC.........................................231.000.00---1.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTATAT................................................291.000.00-1.00-------------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCGATG.......191.000.00------1.00--------------------------------------
...................................................................................................................................................................................TTTATTTATTTATTTATTTTTTCGAGGCGG.........................................301.000.00---1.00-----------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTCCG...............................................311.000.001.00--------------------------------------------
.......................................................AGGAAGCAGGGGAGGCCCGGCCAGGCCTGGG....................................................................................................................................................................3111.001.00---1.00-----------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTTTTCGAGATG..........................................321.000.00---1.00-----------------------------------------
...................................................................................................................................................................................................................................AGGCCGGAGTGCAATGGCTCC..211.000.00------1.00--------------------------------------
...........................................................................................................................................................................................................................TGTTGTCCAGGCCGGAGTGCAGCGG......251.000.00---1.00-----------------------------------------
....................................................................................................................................................................................................TTTTTCGAGAGGGGTTCA....................................181.000.00------1.00--------------------------------------
.......................................................................................................................................................................................TTTATTTATTTATTTTTTCGAGAG...........................................2411.001.00------1.00--------------------------------------
.........................................................................................................................................................................................TATTTATTTATTTTTTCGGAG............................................211.000.00---1.00-----------------------------------------
.....................................................................................................GAAGGAGTTTGTCGG......................................................................................................................................1511.001.00-------------1.00-------------------------------
.....CCTCCGACCGGGTGGCCGCCA................................................................................................................................................................................................................................2111.001.00-----------------------------------1.00---------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTTTCAAG.............................................311.000.00-1.00-------------------------------------------
............................................................................................................................................................................................TTATTTATTTTTTCGGCTT...........................................191.000.00---1.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTCATG..............................................311.000.001.00--------------------------------------------
..................................................................................................................................................................................TTTTATTTATTTATTTATTTTTTCAAAG............................................281.000.001.00--------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCTGG.............................................301.000.00---1.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTCTTG..............................................311.000.00-----1.00---------------------------------------
..TCGCCTCCGACCGGGTGGCCGCCAGCC.............................................................................................................................................................................................................................271.000.00---------------1.00-----------------------------
..............................................................................................................................................................................................................................TGTCCAGGCCGGAGTGCAGCGA......221.000.00---------1.00-----------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATATTG..................................................271.000.00--1.00------------------------------------------
....................................CCAGATGAAGGACGGTGAGAG.................................................................................................................................................................................................2111.001.00------------1.00--------------------------------
.......................................................................................................................................GAGGATCTGAGAGATGGA.................................................................................................1811.001.00-----------------------------1.00---------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTTTCG...............................................2911.001.00-1.00-------------------------------------------
....................................................................................................................................................................................TTATTTATTTATTTATTTTTTCCTA.............................................251.000.00----1.00----------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCTCG.............................................301.000.001.00--------------------------------------------
.................................................................................................................................................GAGATGGAAGCCGGCTTCC......................................................................................191.000.00-------------------------1.00-------------------
.................................................................................................................................................................................................................................CCAGGCCGGAGTGCAATTTC.....201.000.00-------1.00-------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGTAGG..241.000.00---1.00-----------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGCGAG..241.000.00---1.00-----------------------------------------
................................................................................................................................TACCAGGGAGGATCTGATT.......................................................................................................191.000.00----------------------1.00----------------------
............................................................................................................................................................................................................................GTTGTCCAGGCCGGAGTGCAG.........211.000.00---------------------1.00-----------------------
.............................................................................................................................................................................................................................TTGTCCAGGCCGGAGTGCAGCG.......221.000.00---1.00-----------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTTTTCTTG.............................................291.000.00--1.00------------------------------------------
......................................................................................................................................................................................ATTTATTTATTTATTTTTTCGAGGCG..........................................261.000.00---1.00-----------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGCAGG..241.000.00---1.00-----------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTTTTTTG...............................................311.000.00--1.00------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCG...............................................2821.001.00-0.500.50------------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTCTCT........................................................221.000.001.00--------------------------------------------
.................................................................................................................................................................................ATTTTATTTATTTATTTATTCAAA.................................................241.000.00----1.00----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTATAG................................................291.000.00-1.00-------------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTCGCG................................................261.000.00---1.00-----------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTCCG.....................................................211.000.00--1.00------------------------------------------
................................................................................................................................................AGAGATGGAAGCCGGACG........................................................................................181.000.00----------------1.00----------------------------
...................................................TGAGAGGAAGCAGGGAAGC....................................................................................................................................................................................191.000.00------------------------------------1.00--------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATAG......201.000.00-------1.00-------------------------------------
.......................................................................................................................................GAGGATCTGAGAGATGGAAGCCGGCCT........................................................................................2711.001.00-------------------------------------1.00-------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTCGAG................................................291.000.00---1.00-----------------------------------------
...................................................................................................................................................................................TTTATTTATTTATTTATTTTTTCGAGTTAG.........................................301.000.00-----1.00---------------------------------------
....................................................................................................AGAAGGAGTTTGTCGGGGGTTGAATAAG..........................................................................................................................2811.001.00--------------------1.00------------------------
.................................................................................................................................ACCAGGGAGGATCTGAGGCAA....................................................................................................211.000.00----------------------------1.00----------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTATT...............................................301.000.00----1.00----------------------------------------
.GTCGCCTCCGACCGGG.........................................................................................................................................................................................................................................1611.001.00----------------------------------------1.00----
...................................................................................................................................................................................................................................AGGCCGGAGTGCAATGGCGGACA231.000.00-------------------------------1.00-------------
...............................................................................................................................................................................TTATTTTATTTATTTATTCTAG.....................................................221.000.00--1.00------------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTGAG.............................................321.000.00---1.00-----------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTCGG................................................271.000.00---1.00-----------------------------------------
...................................................TGAGAGGAAGCAGGGCAGT....................................................................................................................................................................................191.000.00--------------1.00------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTATTC................................................291.000.00---1.00-----------------------------------------
.....................................................................................................................................................TGGAAGCCGGCCTGCCCTGCCCGTACTCA........................................................................291.000.00---1.00-----------------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTCCTC................................................281.000.001.00--------------------------------------------
...............GGTGGCCGCCAGCAATAT.........................................................................................................................................................................................................................1811.001.00-----------------------------------------1.00---
................................................................................................................................................................................TATTTTATTTATTTATTTATTTCAAT................................................261.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................................CCAGGCCGGAGTGCAATGGCGAG..231.000.00-----1.00---------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTAC..................................................271.000.00--1.00------------------------------------------
.....................................................................................................................................................................................TATTTATTTATTTATTTTTTCAACA............................................251.000.001.00--------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCTCAG............................................311.000.00--1.00------------------------------------------
..............................................................................................................................................................................................................................TGTCCAGGCCGGAGTGCAACGA......221.000.00---------1.00-----------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTCTTG...............................................291.000.001.00--------------------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTTTCTG..............................................301.000.00----1.00----------------------------------------
...........................................AAGGACGGTGAGAGGAAGCA...........................................................................................................................................................................................2011.001.00---------------------------------1.00-----------
....................................................................................................................................................ATGGAAGCCGGCCTGCCCTGCCCGCACT..........................................................................281.000.00---1.00-----------------------------------------
...................................................................................................................................................................................................................TTCGCTCTTGTTGTCCAGGCCGGGG..............251.000.00---1.00-----------------------------------------
...................................................................................................................................................................................................................................AGGCCGGAGTGCAATGGGGT...201.000.00------------------------------------------1.00--
..............................................................................................................................................................................................................................TGTCCAGGCCGGAGTGCAGTCA......221.000.00---------1.00-----------------------------------
.............................................................................................................................................................................................................................TTGTCCAGGCCGGAGTGCAATGGCGCAACC301.000.00------1.00--------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTCA...............................................301.000.00-1.00-------------------------------------------
............................................................................................................................................................................TACTTATTTTATTTATTTATTTATTCAT..................................................281.000.001.00--------------------------------------------
..........................................GAAGGACGGTGAGAGGAAGCA...........................................................................................................................................................................................2111.001.00-----------------1.00---------------------------
..................................GTCCAGATGAAGGACGGTGAGAG.................................................................................................................................................................................................2311.001.00------------1.00--------------------------------
...................................................................................................................................................................................TTTATTTATTTATTTATTTTTTCAGGG............................................271.000.00---1.00-----------------------------------------
..................................................................................................................................................................................TTTTATTTATTTATTTATTTTTTCAGGG............................................281.000.00------1.00--------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCTTAG............................................311.000.00-1.00-------------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATATAG..................................................241.000.001.00--------------------------------------------
.................................................................................................................................................................................................................................CCAGGCCGGAGTGCAAACG......191.000.00-------1.00-------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTTTG.............................................321.000.00--1.00------------------------------------------
.................................................................................................................................................................................ATTTTATTTATTTATTTATTTTTTCAAG.............................................281.000.00--1.00------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTCCCG...............................................281.000.001.00--------------------------------------------
....................................................................................GGGTGTAGGAGCGGCGTC....................................................................................................................................................181.000.00--------------------------1.00------------------
.................................................................................................................................................GAGATGGAAGCCGGCTTC.......................................................................................181.000.00-----------------------1.00---------------------
........................................................................................................................................................................CCCGTACTTATTTTATTTATTTATTTATTTTC..................................................321.000.00-----1.00---------------------------------------
.................................................................................................................................................................................ATTTTATTTATTTATTTATTTTTTCGAG.............................................2821.001.00---1.00-----------------------------------------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTCTTG................................................291.000.00---1.00-----------------------------------------
...........................................................................................................................................................................................................AGAGGGGTTTCGCTCTTGTTGTCCAGGCCGG................3111.001.00------1.00--------------------------------------
...........................................................................................................................................................................................................................TGTTGTCCAGGCCGGAGTGCAATGGCAGG..291.000.00---1.00-----------------------------------------
..............................................................................................................................................................................................................................TGTCCAGGCCGGAGTGCAGCG.......211.000.00-------1.00-------------------------------------
..............................................................................................................................AGTACCAGGGAGGATCTGAGAGACG...................................................................................................251.000.00---1.00-----------------------------------------
........................................................................................................................................AGGATCTGAGAGATGCCT................................................................................................181.000.00--------------------------------------1.00------
.............................................................................................................................................................................ACTTATTTTATTTATTTATTTATTTTTTTT...............................................301.000.001.00--------------------------------------------
...........................CAATATTGTCCAGATGAAG............................................................................................................................................................................................................1911.001.00----------1.00----------------------------------
.................................................................................................................................................GAGATGGAAGCCGGCT.........................................................................................161.000.00------------------------1.00--------------------
........................................ATGAAGGACGGTGAGA..................................................................................................................................................................................................1611.001.00---------------------------------------1.00-----
...........................................................................................................................................................................................................................TGTTGTCCAGGCCGGAGTGTTG.........221.000.00---1.00-----------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTTTTCTAAG............................................301.000.001.00--------------------------------------------
...............................................................................................................................................................................TTATTTTATTTATTTATTTATTTTTTCCCCG............................................311.000.001.00--------------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATTG......201.000.00-------1.00-------------------------------------
..............................................................................................................................................................................CTTATTTTATTTATTTATTTATTTTTTTTTG.............................................311.000.00--1.00------------------------------------------
...................................................TGAGAGGAAGCAGGGCTGT....................................................................................................................................................................................191.000.00--------------1.00------------------------------
....................................................................................................................................................................................................................TCGCTCTTGTTGTCCAGGCCGGAG..............2430.670.67---0.67-----------------------------------------
................................................................................................................................................................................TATTTTATTTATTTATTTATTTTTTCG...............................................2730.670.670.33-0.33------------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGCGCCCTC2740.500.25---0.50-----------------------------------------
........................................................................................................................................AGGATCTGAGAGATGG..................................................................................................1630.330.33-------------------------------------------0.33-
..................................................................................................................................................................................TTTTATTTATTTATTTATTTTTTCGAG.............................................2770.290.29---0.29-----------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGCGCAG.2540.250.25------0.25--------------------------------------
................................................................................................................................................................................................................................TCCAGGCCGGAGTGCAATGGCGC...2340.250.25---0.25-----------------------------------------
..........................................................................................................................................................................................................................TTGTTGTCCAGGCCGGAGTGCAATGGCGC...2940.250.25------0.25--------------------------------------
...........................................................................................................................................................................................................................TGTTGTCCAGGCCGGAGTGCAATGGCG....2760.170.17---0.17-----------------------------------------

Antisense strand
TGTCGCCTCCGACCGGGTGGCCGCCAGCAATATTGTCCAGATGAAGGACGGTGAGAGGAAGCAGGGGAGGCCCGGCCAGGCCTGGGGTGTAGGAGCGGCCAGAAGGAGTTTGTCGGGGGTTGAATAAGTACCAGGGAGGATCTGAGAGATGGAAGCCGGCCTGCCCTGCCCGTACTTATTTTATTTATTTATTTATTTTTTCGAGAGGGGTTTCGCTCTTGTTGTCCAGGCCGGAGTGCAATGGCGCGAT
...................................................................................................................................((((((((..(((............)))))).)))))..................................................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189785SRR189787SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
.....................................................................GCCCGGCCAGGCCTGGGTC.................................................................................................................................................................. 194.000.00--------4.00------------------------------------
.................................................................................................................................................................................................................................CCATTGCACTCCGGCCTGG...... 1901.001.00------------------1.00--------------------------
.....................................................................................................................................................................................................................CGCTCTTGTTGTCCAGG.................... 171.000.00------------------------------1.00--------------
.....................................................................................................................................................................................................................................GCCGGAGTGCAATGGTGTG.. 191.000.00---------------------------1.00-----------------
....................................................................................................................................................................................................................................GGCCGGAGTGCAATGGCGCGATGGGC 261.000.00---1.00-----------------------------------------
.....................................................................................................................................................................................................................................GCCGGAGTGCAATGGCGCGATGTGG 251.000.00-------------------1.00-------------------------
..............................................................................................................................................................AGTACGGGCAGGGCAGGC.......................................................................... 1811.001.00-------------1.00-------------------------------
......................................................................................................................................................................................................................GCTCTTGTTGTCCAGGCTCTG............... 211.000.00----------1.00----------------------------------
....................................................................................................................................................................................................................................GGCCGGAGTGCAATGGCGCGAGGGC 251.000.00---1.00-----------------------------------------
....................................................................................................................................................................................................................................GGCCGGAGTGCAATGGCGCGATCGGG 261.000.00---1.00-----------------------------------------
...................................................................................................................................................................................................................CTGGACAACAAGAGCGAA..................... 1801.001.00--------------------------------1.00------------
.....................................................AGAGGAAGCAGGGGAGAC................................................................................................................................................................................... 181.000.00-------1.00-------------------------------------
................................................................................................................................................................GTACGGGCAGGGCAG........................................................................... 1540.250.25--------------------------------------------0.25