ID: uc001bzd.1_intron_5_0_chr1_36102034_r.3p
GENE: (1)
chr1:36101984-36102233-


(1)
AGO1.ip
(1)
AGO3.ip
(8)
B-CELL
(2)
BRAIN
(7)
BREAST
(38)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(1)
HELA
(1)
KIDNEY
(6)
LIVER
(1)
OTHER
(55)
SKIN
(1)
TESTES
(2)
XRN.ip

Sense strand
ACATGTTCAGGATAGATGCAAGCATCCATTTTTTTTTTTTTCTGAATAATTTTGATCCATAGTTTGTTGAATTGTGGATTCAGAATCCATGTATATGGAAGGCCAACTGTAGTAATTAATAAACCTGTTTATGGTTACATAAATAATGACGGTCAATGTCTGTTAAGGCAGTTTCTAACACAGTTTTCTTCTTTGAGCAGATCATGACAAGATGTTTAAGATGAGTGAAAAGATATTACTCCTGTGTGTT
..........................................................................................((.((.((((((..((((((.((.........(((((((((((....)))))))).....)))...(((((....))))).......)))))))).)))))).)).))....................................................
..........................................................................................91...........................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029129(GSM416758)
SW480. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029128(GSM416757)
H520. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCAG..................................................271755.00755.00130.0089.0076.0056.0035.0037.0015.0011.0015.0013.009.008.008.009.007.007.007.007.007.007.006.005.006.005.005.00-6.005.006.005.005.003.004.005.00-5.002.004.002.004.003.002.003.003.004.00-3.003.001.003.003.002.001.002.002.003.00-3.003.003.00-3.002.003.003.003.00--1.001.002.002.001.002.00-2.00-1.002.001.001.00-2.002.002.002.002.002.002.001.001.002.002.002.00--1.001.00-1.001.001.00-1.00-1.001.001.00-1.001.001.00-1.001.00-1.001.00---1.00-------1.001.001.00--
..........................................................................................................................................................................GTTTCTAACACAGTTTTCTTCTTTGAGCAG..................................................30151.0051.00--6.005.004.002.004.005.001.00-------1.00------1.001.00--1.00---1.001.00---2.00-1.00--2.00---------1.002.00---3.00---------1.00-1.001.00-------------------1.001.00----1.00-------------------1.00------------------
..............................................................................................................................................................................CTAACACAGTTTTCTTCTTTGAGCAG..................................................2615.005.002.00-----1.00--1.00-------------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCAGA.................................................2813.003.00------------------------------------------1.00-----1.00-----1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCA...................................................2613.003.00-3.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................AGTTTCTAACACAGTTTTCTTCTTTGAGCAG..................................................3113.003.00------------------------------------------------------------------1.00----------1.00--1.00-----------------------------------------------------
............................................................................................................................................................................................................TGACAAGATGTTTAAGATGAGT........................2212.002.00------------------------------------------------------------2.00-------------------------------------------------------------------------
................................................................................................................................................................................AACACAGTTTTCTTCTTTGAGCAG..................................................2412.002.00------------------------------------------------1.00-------------------------------------------------1.00-----------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCAT..................................................2712.003.00------------------------------------------------------------------------1.00---------------------------------------------------1.00---------
..........................................................................................................................................................................GTTTCTAACACAGTTTTCTTCTTTGAGCA...................................................2912.002.00------1.00-----------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................GACAAGATGTTTAAGATGAGTG.......................2212.002.00------------------------------------------------------------1.00-----------------------------------------------------------1.00-------------
.........................................................................................................................................................................................TTCTTCTTTGAGCAG..................................................1502.002.00-----2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGC....................................................2512.002.00---1.001.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ATGTTTAAGATGAGTGA......................1731.331.33----------------------------------------------------------------------------------------------1.33---------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGTA...................................................2611.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCT..........................................................1911.001.00--------------------------------------------------------------------------------------------------------------------------1.00-----------
...........................ATTTTTTTTTTTTTCTGAAGGG.........................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------1.00----------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGGAG..................................................2711.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------
........................TCCATTTTTTTTTTTTTCTGAAGG..........................................................................................................................................................................................................241.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CACAGTTTTCTTCTTTGAGCAG..................................................2211.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TGGAAGGCCAACTGTAGTAA.......................................................................................................................................2011.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------
....GTTCAGGATAGATGCAAGC...................................................................................................................................................................................................................................1911.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................CCATTTTTTTTTTTTTCTTCAG...........................................................................................................................................................................................................221.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TTTAAGATGAGTGAAAAG..................1811.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGATCAG..................................................271.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------
........................TCCATTTTTTTTTTTTTCTTAC............................................................................................................................................................................................................221.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATGACAAGATGTTTAAGATGAGT........................2311.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................ATCCATGTATATGGAAGGCCAA................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------1.00-----------------------------
............................................................................................................................................................................TTCTAACACAGTTTTCTTCTTTGAGCAG..................................................2811.001.00------------------------------------------------------------------------------------------------------------1.00-------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCCG..................................................2711.002.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................TAGTAATTAATAAACAGCG..........................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------1.00-------
.......................ATCCATTTTTTTTTTTTAGG...............................................................................................................................................................................................................201.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
..................CAAGCATCCATTTTTTTTTTTTTCTGAATAATT.......................................................................................................................................................................................................3311.001.00-------------------------------------------------------------------1.00------------------------------------------------------------------
........................TCCATTTTTTTTTTTTTCTTGG............................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------1.00----------------------------------------------------
.........................CCATTTTTTTTTTTTTCTTAAT...........................................................................................................................................................................................................221.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGAGTGAAAAGATATTACTCC........2111.001.00--------------------------------------------------------------------------1.00-----------------------------------------------------------
.......................ATCCATTTTTTTTTTTTTAGG..............................................................................................................................................................................................................211.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
............................................................................................ATATGGAAGGCCAACTGTAG..........................................................................................................................................2011.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................ACGGTCAATGTCTGTTCT....................................................................................181.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCAA..................................................2711.003.00----------------------------------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................................................................................................AGATGAGTGAAAAGATATTACTCCT.......2511.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------------
.......................ATCCATTTTTTTTTTTTTCTTTG............................................................................................................................................................................................................231.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGATGTTTAAGATGAGTGAAAAGAT................2511.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------
.........................CCATTTTTTTTTTTTTCATTG............................................................................................................................................................................................................211.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------
..........................CATTTTTTTTTTTTTCTGGCAG..........................................................................................................................................................................................................221.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
.......................ATCCATTTTTTTTTTTTTACAG.............................................................................................................................................................................................................221.000.00------------------------------------------------------------------------------------------------------1.00-------------------------------
..........................CATTTTTTTTTTTTTCTCTGG...........................................................................................................................................................................................................211.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CATGACAAGATGTTTAAGATGAGTG.......................2511.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................AGTTTTCTTCTTTGAGCAG..................................................1911.001.00----------------------------------------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................ATGAGTGAAAAGATATTGTCC.........211.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACACAGTTTTCTTCTTTGAGCAG..................................................2311.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGCAGC.................................................2811.00755.00----1.00---------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CTAACACAGTTTTCTTCTTTGATCAG..................................................261.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAG.....................................................2411.001.00----------------------------------------------------------------------------------------------------------------1.00---------------------
......................CATCCATTTTTTTTTTTTTTTTA.............................................................................................................................................................................................................231.000.00---------------------------------------------------------------------------------------------------------------------------1.00----------
.........................CCATTTTTTTTTTTTTCAATC............................................................................................................................................................................................................211.000.00-------------------------------------------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................TCTAACACAGTTTTCTTCTTTGAGAAG..................................................2711.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------
...............................TTTTTTTTTTCTGAATACAAG......................................................................................................................................................................................................211.000.00-------------------------------------------------------------------1.00------------------------------------------------------------------
......................CATCCATTTTTTTTTTTTTTAG..............................................................................................................................................................................................................221.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------
........................TCCATTTTTTTTTTTTTCCAG.............................................................................................................................................................................................................211.000.00----------------------------------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................................TCATGACAAGATGTTTAAGACG...........................221.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------
......................CATCCATTTTTTTTTTTTAG................................................................................................................................................................................................................201.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------
.......................ATCCATTTTTTTTTTTTCTAG..............................................................................................................................................................................................................211.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GATGTTTAAGATGAGTG.......................1720.500.50----------------------------------------------------------------------------------------------0.50---------------------------------------
.....................................................................................................................................................................AGGCAGTTTCTAACACAGT..................................................................1920.500.50------------------------------------------------------------------------------------------------------------------------------------0.50-
.........................................................................................................................................................................................................................AAGATGAGTGAAAAGAT................1750.200.20-------------------------------------------------------------------------------------------------------------------------------------0.20
........................................................................................................................................................................................TTTCTTCTTTGAGCAG..................................................1680.120.12--0.12-----------------------------------------------------------------------------------------------------------------------------------

Antisense strand
ACATGTTCAGGATAGATGCAAGCATCCATTTTTTTTTTTTTCTGAATAATTTTGATCCATAGTTTGTTGAATTGTGGATTCAGAATCCATGTATATGGAAGGCCAACTGTAGTAATTAATAAACCTGTTTATGGTTACATAAATAATGACGGTCAATGTCTGTTAAGGCAGTTTCTAACACAGTTTTCTTCTTTGAGCAGATCATGACAAGATGTTTAAGATGAGTGAAAAGATATTACTCCTGTGTGTT
..........................................................................................((.((.((((((..((((((.((.........(((((((((((....)))))))).....)))...(((((....))))).......)))))))).)))))).)).))....................................................
..........................................................................................91...........................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029129(GSM416758)
SW480. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR029128(GSM416757)
H520. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
....GTTCAGGATAGATGCAAGTCTG................................................................................................................................................................................................................................ 221.000.00--------------------------------------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................TACATAAATAATGACGGTTTAC............................................................................................. 221.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------
....GTTCAGGATAGATGCATCTG.................................................................................................................................................................................................................................. 201.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................ATAAACCTGTTTATGACTA................................................................................................................. 191.000.00----------------------------------------------------------------------------1.00---------------------------------------------------------