ID: uc001byt.2_intron_23_0_chr1_35870796_f
GENE: (24)
chr1:35870746-35871023+


(1)
B-CELL 		(9)
CELL-LINE 		(1)
HEART 		(1)
LIVER 		(6)
OTHER 		(1)
SKIN

Sense strand
GGTTCAGTGGAAAAATGCCAAGGAAGAGCAGGGGGATCTAAAATGTGGAGGTAAGTGCACAGCATGAATTGTATCTTGATTTAGGTAGGGGGAAATATACAGATAATCTACTGAAAAGGGATACATTTTAGGTCAAAAACCCCATAAAACTTTGGTTTGGGCTTTACTTAATTTTTTCCGCACTTTTATTTTATTTAAACTTTTCTTTTATGTTTCTCTCCTTGTCAGGGGTTGAACAGGCCTCATCTAGCCCACGTTCTGACCCCTTAGGAAGTACT
............................................................................................................................................((((...(((....))))))).....................................................................................................................
............................................................................................................................................141...................................................195.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334SRR343337SRR343336SRR189785SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................................................................................................TTTTTTCCGCACTTTTTACG.......................................................................................201403.003.00125.0084.0077.0055.0046.0016.00-------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTAG.......................................................................................2298.000.0063.0013.005.009.005.003.00-------------
...........................................................................................................................................................................TTTTTTCCGCACTTTTTAC........................................................................................19151.003.005.0021.0017.005.002.001.00-------------
............................................................................................................................................................................TTTTTCCGCACTTTTTACG.......................................................................................1937.000.007.0011.0013.002.002.002.00-------------
..........................................................................................................................................................................ATTTTTTCCGCACTTTTTTAG.......................................................................................2113.000.0011.00-1.001.00---------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTA........................................................................................2113.000.008.001.001.00--3.00-------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTT.........................................................................................2012.000.0012.00------------------
............................................................................................................................................................................TTTTTCCGCACTTTTTAC........................................................................................1810.000.001.002.007.00----------------
...........................................................................................................................................................................TTTTTTCCGCACTTTTT..........................................................................................17110.003.00-7.003.00----------------
...........................................................................................................................................................................TTTTTTCCGCACTTTTCACG.......................................................................................2017.003.002.001.001.00-2.001.00-------------
...........................................................................................................................................................................TTTTTTCCGCACTTTTTATG.......................................................................................2014.003.00-1.002.001.00---------------
...........................................................................................................................................................................TTTTTTCCGCACTTTT...........................................................................................1613.003.00-1.00-1.001.00--------------
................................GGGATCTAAAATGTGGAG....................................................................................................................................................................................................................................1813.003.00-------3.00-----------
...........................................................................................................................................................................TTTTTTCCGCACTTTTTA.........................................................................................1812.003.00--1.00-1.00--------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTTA.......................................................................................222.000.002.00------------------
....................................................................................................................................................................................CACTTTTATTTTATTTAAACTTTTCTTTTATG..................................................................3212.002.00------2.00------------
...........................................................................................................................................................................TTTTTTCCGCACTTTTTACT.......................................................................................2012.003.001.00----1.00-------------
.....................................................................................................................................................................................ACTTTTATTTTATTTAAACTTTTCTTTTATG..................................................................3111.001.00----------1.00--------
........................................................................................................................................................................TAATTTTTTCCGCACTTTAG..........................................................................................201.000.001.00------------------
............................................................................................................................................................................TTTTTCCGCACTTTTTACT.......................................................................................191.000.00---1.00---------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTAT.......................................................................................221.000.001.00------------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTCTTA........................................................................................211.000.001.00------------------
.........................................................................................................................................................................................................................................................GCCCACGTTCTGACCCCTTAGGAAGTAC.2811.001.00--------1.00----------
...................AAGGAAGAGCAGGGGGATA................................................................................................................................................................................................................................................191.000.00--------1.00----------
....................................................................................................................................................................................CACTTTTATTTTATTCTG................................................................................181.000.00------------------1.00
....................................................................................................................................................................................CACTTTTATTTTATTTAAACTTTTCTTTTAT...................................................................3111.001.00----------1.00--------
...........................................................................................................................................................................TTTTTTCCGCACTTT............................................................................................1511.001.00--1.00----------------
.............................AGGGGGATCTAAAATGTGG......................................................................................................................................................................................................................................1911.001.00--------------1.00----
....................AGGAAGAGCAGGGGGATCTAA.............................................................................................................................................................................................................................................2111.001.00--------1.00----------
.........................................................................................................................................................................AATTTTTTCCGCACTTCTT..........................................................................................191.000.001.00------------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTAA.......................................................................................221.000.001.00------------------
..................CAAGGAAGAGCAGGGGCTT.................................................................................................................................................................................................................................................191.000.00-----------1.00-------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTCTAG.......................................................................................221.000.001.00------------------
..........................................................................................................................................................................ATTTTTTCCGCACTTTTTT.........................................................................................191.000.001.00------------------
...........................................................................................................................................................................TTTTTTCCGCACTTTACG.........................................................................................1811.001.001.00------------------
....................................................................................................................................................................................CACTTTTATTTTATTTAAACTTTTC.........................................................................2511.001.00---------1.00---------
...........................................................................................................................................................................TTTTTTCCGCACTTTCTAC........................................................................................1911.001.00--1.00----------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTTGG.......................................................................................221.000.001.00------------------
...........................................................................................................................................CCCCATAAAACTTTGCAC.........................................................................................................................181.000.00--1.00----------------
.......................................................................................................................................................TTGGTTTGGGCTTTATATT............................................................................................................191.000.00---------1.00---------
....................................................................................................................................................................................CACTTTTATTTTATTTAAAG..............................................................................201.000.00------1.00------------
.................................................................................................................................................AAAACTTTGGTTTGGGCAAA.................................................................................................................201.000.00------------1.00------
....................................................................................................................................................................................CACTTTTATTTTATTTAAACTTTTCTTTTACG..................................................................321.000.00------1.00------------
....................................................................................................................................................................................................................................................................GACCCCTTAGGAAGTCC.171.000.00-------------1.00-----
...................................................................................................................................................................................................................................GGGGTTGAACAGGCCATG.................................181.000.00-----------------1.00-
...........................................................................................................................................................................TTTTTTCCGCACTTTTTACA.......................................................................................2011.003.001.00------------------
..........................................................................................................................................................................ATTTTTTCCGCACTTTTTTA........................................................................................201.000.001.00------------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTT..........................................................................................191.000.00---1.00---------------
.........................................................................................................................................................................AATTTTTTCCGCACTTTTTAGT.......................................................................................221.000.001.00------------------

Antisense strand
GGTTCAGTGGAAAAATGCCAAGGAAGAGCAGGGGGATCTAAAATGTGGAGGTAAGTGCACAGCATGAATTGTATCTTGATTTAGGTAGGGGGAAATATACAGATAATCTACTGAAAAGGGATACATTTTAGGTCAAAAACCCCATAAAACTTTGGTTTGGGCTTTACTTAATTTTTTCCGCACTTTTATTTTATTTAAACTTTTCTTTTATGTTTCTCTCCTTGTCAGGGGTTGAACAGGCCTCATCTAGCCCACGTTCTGACCCCTTAGGAAGTACT
............................................................................................................................................((((...(((....))))))).....................................................................................................................
............................................................................................................................................141...................................................195.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334SRR343337SRR343336SRR189785SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................AACTTTGGTTTGGGCGT.................................................................................................................. 171.000.00----------------1.00--
.................................................................................................................................................................................................TTTAAACTTTTCTTTTCTGC................................................................. 201.000.00-----1.00-------------
...........................................................................................GAAATATACAGATAATTGA........................................................................................................................................................................ 191.000.00---------1.00---------
...................................................................................................................................................AACTTTGGTTTGGGCG................................................................................................................... 161.000.00---------------1.00---