ID: uc001bye.2_intron_1_0_chr1_35449549_r.5p
GENE: (1)
chr1:35450599-35450848-


(2)
AGO2.ip
(12)
B-CELL
(3)
BRAIN
(16)
BREAST
(21)
CELL-LINE
(13)
CERVIX
(2)
HEART
(3)
HELA
(5)
LIVER
(1)
OTHER
(1)
RRP40.ip
(52)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GGTTGGCCAAGCTCTCGGAGGAGATCTCGGCTCCAGTTTCGGAGCGGATGGTGAGCGGCGCGGGCGGGCGGCAGGGGATCGGGCCCGCGGCGGCGTGTGCTCCGCCCTGCCGCTCCTCGCCCCCGGCCCGGCAGGCCGCCTTCGGGCTTCCGAGGCTCAGCTGGAGCTGGGGGAAAGCGCCTGGCTTTCGACTGAGGCGCAGGTCCTGCCTGGGGAGTTCCTCGAGTTCTCTGGATCTTCCCTAGACGGA
......................................................((((((.(((((((((((((((...(((((.((((....)))).)).)))))))))))))...))))).)).))..))......................................................................................................................
..................................................51................................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040025(GSM532910)
G613T. (cervix)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
GSM532885(GSM532885)
G850N. (cervix)
..............................................................................................................CGCTCCTCGCCCCCGGAGC.........................................................................................................................19237.002.003.001.001.002.003.00--1.001.001.002.001.002.00--1.00-1.001.00------1.002.001.00---1.00------------1.00---1.00------1.001.00--------1.00-----------1.00---------1.00---1.00------1.00----1.00--1.00------------------------
..............................................................................................................CGCTCCTCGCCCCCGGA...........................................................................................................................1727.002.001.00--1.00---------2.00-------------1.00-----------------------------------------------------1.00--------1.00----------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGAG..........................................................................................................................1827.002.00-----2.00----1.00-------1.00-----------2.00-------------------------------------------------------------1.00--------------------------------------
...............................................................................................................GCTCCTCGCCCCCGGAGC.........................................................................................................................1835.000.67-------1.00-------1.00----1.00----1.00------------------------------------1.00--------------------------------------------------------------------
.....................................TTCGGAGCGGATGGTGAG...................................................................................................................................................................................................1815.005.00--------------1.00------------------1.00-----1.00---------------------1.00-------------------------------------1.00-------------------------------
...............................................................................................................GCTCCTCGCCCCCGGA...........................................................................................................................1633.000.67--1.00-----------------------------1.00-------------------------1.00------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGGA...........................................................................................................................1823.002.00--1.00------1.00-----------------------------------------------------------------------------------1.00-------------------------------------
......................................................GCGGCGCGGGCGGGCGCCCG................................................................................................................................................................................202.000.00------2.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGG............................................................................................................................1622.002.000.50----------0.50------------------------------------------------------------------------------------------------------0.500.50---------------
...............CGGAGGAGATCTCGGCT..........................................................................................................................................................................................................................1712.002.00------------------------------------------------------1.00---------------------------------------1.00------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGGAG..........................................................................................................................1922.002.00--------1.00---------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................................CCGCTCCTCGCCCCCGGAGC.........................................................................................................................2022.002.00---1.00---------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................CCCGCGGCGGCGTGTAGGG....................................................................................................................................................192.000.00-----------------------2.00-----------------------------------------------------------------------------------------------------------
.............CTCGGAGGAGATCTCGGC...........................................................................................................................................................................................................................1812.002.00---------------------------------------------------------------------------1.00---------1.00---------------------------------------------
...............................................................................................................GCTCCTCGCCCCCGGAG..........................................................................................................................1732.000.67-----------1.00-----------------------------------------------------------------------1.00-----------------------------------------------
..................................AGTTTCGGAGCGGATGGT......................................................................................................................................................................................................1812.002.00----------------------2.00------------------------------------------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGG............................................................................................................................1722.002.00------------0.50---------------------------------------------------0.50-----------------------------------------------0.50----0.50-------------
.....................................TTCGGAGCGGATGGTGAGCGG................................................................................................................................................................................................2112.002.00----------------2.00------------------------------------------------------------------------------------------------------------------
............................................................CGGGCGGGCGGCAGGGGA............................................................................................................................................................................1822.002.00------------------------------------0.50--------1.00-------------------------------------------------------------------0.50-----------------
...............................................................................CGGGCCCGCGGCGGCCCGG........................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................GCGGCGCGGGCGGGCGGCC.................................................................................................................................................................................191.000.00------------------------------------------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................................................TCGACTGAGGCGCAGGT..............................................1711.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------
..................................AGTTTCGGAGCGGATGAA......................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................GGGGAAAGCGCCTGGCTTTCGACTGAGGCG...................................................3011.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------
............................................CGGATGGTGAGCGGCGCG............................................................................................................................................................................................1811.001.00---------------------1.00-------------------------------------------------------------------------------------------------------------
.......................................CGGAGCGGATGGTGAGC..................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------1.00---------------------------------------------------
.....................................TTCGGAGCGGATGGTGCG...................................................................................................................................................................................................181.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------
..TTGGCCAAGCTCTCGGAGGAG...................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGTTC.........................................................................................................................1921.002.00---------------------------------------------------1.00-------------------------------------------------------------------------------
............TCTCGGAGGAGATCTCGGCTCCCA......................................................................................................................................................................................................................241.000.00----1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................GCGGGCGGCAGGGGATCGGGCAAT...................................................................................................................................................................241.000.00------------------------------------------------------------------------------------------------------1.00----------------------------
.....GCCAAGCTCTCGGAGGA....................................................................................................................................................................................................................................1711.001.00----------------------------------------1.00------------------------------------------------------------------------------------------
.............CTCGGAGGAGATCTCGGCTCCAGT.....................................................................................................................................................................................................................2411.001.00-----------------1.00-----------------------------------------------------------------------------------------------------------------
............................................................CGGGCGGGCGGCAGGGGAT...........................................................................................................................................................................1911.001.00--------------------------------------1.00--------------------------------------------------------------------------------------------
.......................................CGGAGCGGATGGTGAGCGGCG..............................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................GCGGGCGGGCGGCAGGGGATA..........................................................................................................................................................................211.000.00------------------------------------------------------------------------------------1.00----------------------------------------------
.....................................................................................................................................................................................TGGCTTTCGACTGAGGC....................................................1711.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------
...........CTCTCGGAGGAGATCTCGG............................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00---------------------------------------------------------
...........................................................GCGGGCGGGCGGCAGGGG.............................................................................................................................................................................1811.001.00------------------------------------1.00----------------------------------------------------------------------------------------------
.............CTCGGAGGAGATCTCGGCTCCAG......................................................................................................................................................................................................................2311.001.00------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................CCTCGCCCCCGGCCCGGGCC....................................................................................................................201.000.00----------------------------------------------------------------------------1.00------------------------------------------------------
.......................................CGGAGCGGATGGTGAGCG.................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00----------------------------------------------------------------------
.............................................................................ATCGGGCCCGCGGCGGCG...........................................................................................................................................................1811.001.00-----------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGAGCC........................................................................................................................2021.002.00-1.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGGAGT.........................................................................................................................2021.002.00-----------------------------------------------------------------------------------------------------------1.00-----------------------
...........................................................GCGGGCGGGCGGCAGGCAG............................................................................................................................................................................1951.000.20--------------------------------------------------------------------1.00--------------------------------------------------------------
...........................................GCGGATGGTGAGCGGCG..............................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------------------1.00-------------------------
...........................................................GCGGGCGGGCGGCAGGCG.............................................................................................................................................................................1851.000.20-------------------------------------------------1.00---------------------------------------------------------------------------------
.........AGCTCTCGGAGGAGATCTCGGCT..........................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------1.00------------------------------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGAGCA........................................................................................................................2021.002.00-----1.00-----------------------------------------------------------------------------------------------------------------------------
........................................................................AGGGGATCGGGCCCGCGGCGGCGC..........................................................................................................................................................241.000.00------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................TCCGAGGCTCAGCTGGAGCTGGGG..............................................................................2411.001.00-----------------------------------------------------------------------------------------------------1.00-----------------------------
...............................................................................................................GCTCCTCGCCCCCGGCGC.........................................................................................................................181.000.00------------------------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGTGCA........................................................................................................................2021.002.00--------1.00--------------------------------------------------------------------------------------------------------------------------
....................................................GAGCGGCGCGGGCGGCGCG...................................................................................................................................................................................191.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCG.............................................................................................................................1621.001.00----------------------------------------------------------------0.50---------------------------------------------------0.50--------------
..............TCGGAGGAGATCTCGGC...........................................................................................................................................................................................................................1711.001.00--------------------------------------------------------------------------------1.00--------------------------------------------------
..............................................................................................................................................................................AAGCGCCTGGCTTTCGACT.........................................................1911.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................CGCGGGCGGGCGGCAGGGGATC..........................................................................................................................................................................2211.001.00----------------------------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................CGCTCCTCGCCCCCGGAGCT........................................................................................................................2021.002.00---------1.00-------------------------------------------------------------------------------------------------------------------------
...............CGGAGGAGATCTCGGCTC.........................................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------------
................................................................................GGGCCCGCGGCGGCGCCGA.......................................................................................................................................................191.000.00--------------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................TTCGACTGAGGCGCAGGT..............................................1811.001.00--------------------------------------------------------------------------------------1.00--------------------------------------------
...........................................................................GGATCGGGCCCGCGGCGGG............................................................................................................................................................191.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------
...................................GTTTCGGAGCGGATGAAT.....................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------1.00------------------------------------------------
...............................................................................................................GCTCCTCGCCCCCGG............................................................................................................................1530.670.67-0.33-----------0.33---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CTTCGGGCTTCCGAG................................................................................................1520.500.50----------------------------------0.50------------------------------------------------------------------------------------------------
...........................................GCGGATGGTGAGCGG................................................................................................................................................................................................1520.500.50----------------------------------------------------------------------------------------------------------------------0.50------------
.................................................................GGGCGGCAGGGGATC..........................................................................................................................................................................1550.400.40-----------------------------------------------------------------------------------------------------------------------0.40-----------
.............................................................................................................CCGCTCCTCGCCCCC..............................................................................................................................1560.330.33----------------------------------------0.17-------------------------------------------------------------------------------------0.17----
............................................................CGGGCGGGCGGCAGGGGT............................................................................................................................................................................1830.330.33--------------------------------------0.33--------------------------------------------------------------------------------------------
............................................................CGGGCGGGCGGCAGGGG.............................................................................................................................................................................1730.330.33------------------------------------------------------------------------------------------------------------------------0.33----------
............................................................CGGGCGGGCGGCAGGGGC............................................................................................................................................................................1830.330.33--------------------------------------------------------------------------------------------------------------------------0.33--------
..............................................................................................................CGCTCCTCGCCCCCG.............................................................................................................................1540.250.25---------------------------------------------------------------------------------------------------------------------------0.25-------
...........................................................GCGGGCGGGCGGCAGG...............................................................................................................................................................................1650.200.20-----------------------------------------------------------------------------------------------------------------------------0.20-----
.......................................................CGGCGCGGGCGGGCGGC..................................................................................................................................................................................1760.170.17----------------------------------------------------------------------------------------------------------------------------------0.17

Antisense strand
GGTTGGCCAAGCTCTCGGAGGAGATCTCGGCTCCAGTTTCGGAGCGGATGGTGAGCGGCGCGGGCGGGCGGCAGGGGATCGGGCCCGCGGCGGCGTGTGCTCCGCCCTGCCGCTCCTCGCCCCCGGCCCGGCAGGCCGCCTTCGGGCTTCCGAGGCTCAGCTGGAGCTGGGGGAAAGCGCCTGGCTTTCGACTGAGGCGCAGGTCCTGCCTGGGGAGTTCCTCGAGTTCTCTGGATCTTCCCTAGACGGA
......................................................((((((.(((((((((((((((...(((((.((((....)))).)).)))))))))))))...))))).)).))..))......................................................................................................................
..................................................51................................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040025(GSM532910)
G613T. (cervix)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
GSM532885(GSM532885)
G850N. (cervix)
...................................................................................................................................................................................................................GAGAACTCGAGGAACTCCCC................... 2012.002.00----------------------------------1.001.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TAGGGAAGATCCAGAGAACTC...... 2112.002.00-------------------1.00---------1.00-----------------------------------------------------------------------------------------------------
....................................................GAGCGGCGCGGGCGGGGC.................................................................................................................................................................................... 182.000.00-----------------------------------------1.00------------------------------------------------------1.00----------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGGT........................................................................................................................... 1821.000.00-------------------------------------1.00---------------------------------------------------------------------------------------------
....................................................GAGCGGCGCGGGCGGGGCTC.................................................................................................................................................................................. 201.000.00----------------------------------------------------------------------------------------1.00------------------------------------------
..............................................................................................GCGGCAGGGCGGAGCACAC......................................................................................................................................... 1911.001.00----------------------------------------------------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................AACTCGAGGAACTCCCCAGGCA...................... 2211.001.00----------------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GGTCCTGCCTGGGGAGCAA.............................. 191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGCGGGCGGCAGGGAC............................................................................................................................................................................ 181.000.00----------------------------1.00------------------------------------------------------------------------------------------------------
.......................................................CGGCGCGGGCGGGCGGAA................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------
.........................................................................................................CCTGCCGCTCCTCGCCGC............................................................................................................................... 181.000.00----------------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTCGAGGAACTCCCCAGGC........................ 1911.001.00-------------------------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................GGGGAAAGCGCCTGGACG............................................................... 181.000.00------------------------------------------------------------------1.00----------------------------------------------------------------
....................................................GAGCGGCGCGGGCGGGG..................................................................................................................................................................................... 171.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CAGCTGAGCCTCGGAAGC....................................................................................... 1811.001.001.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GGGAAGATCCAGAGAACTCGA........ 2111.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................CCGGCAGGCCGCCTTCACAT....................................................................................................... 201.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................ACTCGAGGAACTCCCCAGGC....................... 2011.001.00---------------------------------------------------------------1.00-------------------------------------------------------------------
...................................................................................................CTCCGCCCTGCCGCTCCG..................................................................................................................................... 181.000.00-----1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCGGG........................................................................................................................... 1821.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------
..CTCCTCCGAGAGCTTGGCCAA................................................................................................................................................................................................................................... 2111.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................CTCGCCCCCGGCCCGGTGC.................................................................................................................... 191.000.00-------------------------------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................................................................................................AGAACTCGAGGAACTCCCCAG.................... 2111.001.00--------------------------------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................CCCCGGCCCGGCAGGCA................................................................................................................. 171.000.00------1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................CCGGCCCGGCAGGCCGCCC............................................................................................................. 191.000.00--------------------------------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................AGGAGCGGCAGGGCGG..................................................................................................................................... 1611.001.00------------------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCTCG........................................................................................................................... 1861.000.00--------------0.17------------------------0.33-0.170.17-------------------------------------------------------------------------------------0.17--
.............................................................................................................CCGCTCCTCGCCCCCTCGG.......................................................................................................................... 1960.830.00---------------------------------0.33---------------------------------------------------------------------------------------0.33-----0.17---
............................................................................................................................................................................................................AGGAACTCCCCAGGCAGG............................ 1820.500.50-----------------------------------0.50-----------------------------------------------------------------------------------------------
................................................................................................................GGGCCGGGGGCGAGGAG......................................................................................................................... 1720.500.50--------------------------------0.50--------------------------------------------------------------------------------------------------
.............................................................................................................GGGGGCGAGGAGCGG.............................................................................................................................. 1560.500.50-------------------------------------0.17-------------------------------------------------------------------------0.17-----------------0.17-
.............................................................................................................CCGGGGGCGAGGAGCGG............................................................................................................................ 1720.500.50---------------------------------------------------------------------------------------------------------------0.50-------------------
.............................................................................................................CCGCTCCTCGCCCCCTC............................................................................................................................ 1760.330.00--------------------------------0.17----0.17---------------------------------------------------------------------------------------------
.............................................................................................................CCGCTCCTCGCCCCCTCA........................................................................................................................... 1860.330.00---------------------------------0.33-------------------------------------------------------------------------------------------------
.................................................................................ACGCCGCCGCGGGCC.......................................................................................................................................................... 1540.250.25----------------------------------------------------------------------------------------------------------------------------0.25------