ID: uc001bwf.1_intron_4_0_chr1_33334599_r.5p
GENE: (1)
chr1:33336054-33336303-


(3)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(25)
BREAST 		(21)
CELL-LINE 		(25)
CERVIX 		(1)
FIBROBLAST 		(9)
HEART 		(7)
LIVER 		(2)
OTHER 		(63)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CGCGCTCCGCCTGTGGCTGGGCTGCGTCTGCTTCGCGCTGGTGCAGGCGGGTAAGGGGGCCCGGGGCGGGGGGCCGGCGCCGGGGCAGGCTCCTCTCGAGCCCAGCTACCTGGGAGTCCCCTGGTCCTTTCTCTGCCCCCTAGGGACTCCTGTCTCGGCCCAAACACTGCTCCCCTAACCCAGCCCCCAGCGTCTTCCTACCTCCTTGACCCCCAGACCTGTCCTTCAGTTTCCAAATCTCCCCTGTCAC
.....................................................(((((((((.((((.((...)).)).)).))))...)))))............................................................................................................................................................
..................................................51..............................................99......................................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM532890(GSM532890)
G576T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM532886(GSM532886)
G850T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		GSM532879(GSM532879)
G659N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532888(GSM532888)
G761T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040018(GSM532903)
G701N. (cervix)		SRR040030(GSM532915)
G013N. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
.......................................................GGGGCCCGGGGCGGGGT..................................................................................................................................................................................172022.000.001913.009.007.008.00-2.00-3.00-6.001.002.003.004.00-5.003.001.003.00--3.004.003.00-1.002.00--2.001.00-2.00-2.002.00--1.003.002.00---1.00-1.001.00--1.00--2.001.002.00----1.00--1.00-----1.00-------1.00-1.00-1.00---1.00----1.00---1.00-----------1.00---------1.001.001.00---1.001.00----------------------------------
.......................................................GGGGCCCGGGGCGGGGTC.................................................................................................................................................................................1887.000.0014.009.001.00--5.004.001.00--2.002.001.001.00--1.00--3.00-1.00-1.00--1.001.002.001.001.00-1.002.00-1.002.00----1.001.001.00-1.001.00-1.00-1.002.00-----2.00-1.00-2.001.00-1.00-----1.00---1.00-1.00---------1.00---------1.00-1.00-----1.001.00--1.001.00-----------1.00---1.00---1.00----------------------------
......................................................GGGGGCCCGGGGCGGGGT..................................................................................................................................................................................18448.0017.2535.00-------7.00----------1.001.00-------------------------------------2.00----------------------------------------------------1.00--------1.00-------------------------------------
.......................................................GGGGCCCGGGGCGGGGTCCG...............................................................................................................................................................................2045.000.001.001.009.00--2.001.003.00-1.00-1.00----1.002.002.001.00-----3.00-1.00--1.00--1.00----1.00-1.001.00-1.001.001.00--------1.00-----1.00------2.00-------1.00-----------------1.00-------1.00-1.00------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGG..................................................................................................................................................................................17842.7542.7541.75--0.25-----0.12-----0.12------0.38--------------------------------------------------------------------------------------------------------------------------------------0.12
.......................................................GGGGCCCGGGGCGGGGTCC................................................................................................................................................................................1939.000.001.00-----4.002.00---1.002.00----2.00--------1.002.00------1.00-1.002.001.00--1.001.00----1.001.001.00--2.00---2.00-----1.00-1.002.00------1.001.00------1.00----------------1.00---------------1.00----------------1.00---------------------------
......................................................GGGGGCCCGGGGCGGGG...................................................................................................................................................................................17417.2517.2515.50--0.50---------------------------------------0.25-------------------------0.75------------------------------------------------------------------------------------0.25---
.......................................................GGGGCCCGGGGCGGGGTA.................................................................................................................................................................................1811.000.0011.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGGGG..................................................................................................................................................................................1839.679.679.33-------0.33-----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTT.................................................................................................................................................................................187.000.002.002.00-1.00------------------------------------------------------------------------------------1.00--------------------------------------1.00------------------------------
........................................................GGGCCCGGGGCGGGG...................................................................................................................................................................................1507.007.00----------3.00-------------------------------------------------------------------------1.00----------1.00---1.00----------1.00-----------------------------------------------
......................................................GGGGGCCCGGGGCGGGGA..................................................................................................................................................................................1846.0017.256.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCG.....................................................................................................................................................................186.000.001.00-------------------1.00----------1.00---------------------------1.00--------1.00--------------------------------------1.00--------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGGC......................................................................................................................................................................1835.331.00-0.33----------------------------0.330.33---------------0.33----------------------0.67--------------------------------------------------------------0.33----0.33-0.330.33-0.33-0.33-0.33--0.330.330.33-----
...................................................................GGGGGGCCGGCGCCGGCGGC...................................................................................................................................................................204.000.00----2.00---------1.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTG.................................................................................................................................................................................184.000.003.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGGCG.....................................................................................................................................................................1933.671.00--------------------0.67---------------------0.670.33--0.33--------------------------------0.33-----------------------------------------------------0.33--------0.33---0.33-0.33---------
...................................................................GGGGGGCCGGCGCCGGCC.....................................................................................................................................................................183.000.00--------------1.00----------------1.00-----1.00------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCGGG...................................................................................................................................................................202.000.00-------------------------------------------------------------------------------------------1.00---------------------------------------1.00--------------------------
.............................................................CGGGGCGGGGGGCCGGCGGC.........................................................................................................................................................................2021.500.50-----------------------------------------------------------------------0.50-----0.50--------------------------------------------------------0.50-----------------------
.............................................................CGGGGCGGGGGGCCGGCGGCG........................................................................................................................................................................2121.500.50------------0.50-------------------------------------------------------------0.50--------------------------------------------------------------0.50--------------------
...........................................................CCCGGGGCGGGGGGCTC..............................................................................................................................................................................171.000.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCGG....................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
................................................................................................................................................................................................TCTTCCTACCTCCTTTTTG.......................................191.000.00----------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.........................................................GGCCCGGGGCGGGGGGTAGG.............................................................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGGGGG.................................................................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................CGGGGCGGGGGGCCGGCGGCGG.......................................................................................................................................................................2221.000.50------------------------------------------------------------------------0.50------------------------------------------------------------------0.50------------------
...................................................................GGGGGGCCGGCGCCGGTGG....................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................GGGCAGGCTCCTCTCGTA......................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................................................................CCAAACACTGCTCCCTTTC........................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGGGCC...............................................................................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGG....................................................................................................................................................................................1501.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGC......................................................................................................................................................................171.000.00------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.............................................................CGGGGCGGGGGGCCGGCGG..........................................................................................................................................................................1921.000.50-------------------------------------------------------------------------0.50-0.50----------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCTG....................................................................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTCA................................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGGGGCCCGGGTAA......................................................................................................................................................................................181.000.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGGGTTCG...............................................................................................................................................................................2141.0017.251.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCGAC...................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.......................................................GGGGCCCGGGGCGGGGTGC................................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGG.......................................................................................................................................................................1731.001.00-----------------------------0.33-----------------------------------------------------------------------------------------------------------------------0.33---0.33----
...................................................................................................................................................................ACACTGCTCCCCTAAAGTA....................................................................191.000.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
................................................................GGCGGGGGGCCGGCGCCGGCG.....................................................................................................................................................................211.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................CCCGGGGCGGGGGGCCG..............................................................................................................................................................................1711.001.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGAGT..................................................................................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTTGT...............................................................................................................................................................................201.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGCCGC....................................................................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................GGCCCGGGGCGGGGGGCGCT.............................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................................GGGGGGCCGGCGCCGGCGCG...................................................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGGCTGC...................................................................................................................................................................201.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCAAACACTGCTCCCTTGG........................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTCCA...............................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
.................................................................GCGGGGGGCCGGCGCG.........................................................................................................................................................................161.000.00-----------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................GCCCGGGGCGGGGGGCCGGGCG..........................................................................................................................................................................221.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GGGGGGCCGGCGCCGC.......................................................................................................................................................................161.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGGCGGGGGGCCGGCGCG.........................................................................................................................................................................181.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGGGCCCCG............................................................................................................................................................................2311.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGGGGGCCCGGGGCGGGGA..................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGTGCG...............................................................................................................................................................................201.000.00-------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
......................................................GGGGGCCCGGGGCGGGGTC.................................................................................................................................................................................1941.0017.251.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGGCGG....................................................................................................................................................................2030.671.00------------0.33-0.33-----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGGCGGC...................................................................................................................................................................2130.671.00---------------------0.33----------------------------------------------------------0.33-----------------------------------------------------------------------------
.......................................................GGGGCCCGGGGCGGGGGG.................................................................................................................................................................................1820.500.50----0.50---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGG....................................................................................................................................................................................1660.500.50----0.17---------0.17--------------------------------------------------------------------------------------------------------------------------------------------0.17--
.............................................................CGGGGCGGGGGGCCGGCG...........................................................................................................................................................................1820.500.50---------------------------------------------------------------------------------------------------------------------------------------0.50----------------------
..................................................................CGGGGGGCCGGCGCCGGCGA....................................................................................................................................................................2030.331.00------------------------------------------------------------------------------0.33-------------------------------------------------------------------------------
..................................................................CGGGGGGCCGGCGCCGGCGGT...................................................................................................................................................................2130.331.00---------------------------------------------0.33----------------------------------------------------------------------------------------------------------------
............................................................CCGGGGCGGGGGGCCGG.............................................................................................................................................................................1730.330.33----0.33---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................GGGCCCGGGGCGGGGGGC................................................................................................................................................................................1830.330.330.33-------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................GGGCCCGGGGCGGGGGGGG...............................................................................................................................................................................1950.200.20--------------------------------------------0.20-----------------------------------------------------------------------------------------------------------------
........................................................GGGCCCGGGGCGGGGGGG................................................................................................................................................................................1850.200.20--------------0.20-----------------------------------------------------------------------------------------------------------------------------------------------
........................................................GGGCCCGGGGCGGGGGG.................................................................................................................................................................................1750.200.20---------------------------------------------------------------------------------0.20----------------------------------------------------------------------------
........................................................GGGCCCGGGGCGGGGGGGC...............................................................................................................................................................................1950.200.20---------------------0.20----------------------------------------------------------------------------------------------------------------------------------------
......................................................GGGGGCCCGGGGCGGGCA..................................................................................................................................................................................1860.170.500.17-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCGGGGGGCCGGCG...........................................................................................................................................................................1760.170.17------------------------------------------------------------------------------------------------------------------------------------------0.17-------------------
......................................................GGGGGCCCGGGGCGGGTG..................................................................................................................................................................................1860.170.500.17-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GCCGGGGCAGGCTCC.............................................................................................................................................................1570.140.14------------------------------------------------------------------------------------------------------------------------------------------------------------0.14-
..................................................................CGGGGGGCCGGCGCC.........................................................................................................................................................................1570.140.14--------------------------------------------0.14-----------------------------------------------------------------------------------------------------------------

Antisense strand
CGCGCTCCGCCTGTGGCTGGGCTGCGTCTGCTTCGCGCTGGTGCAGGCGGGTAAGGGGGCCCGGGGCGGGGGGCCGGCGCCGGGGCAGGCTCCTCTCGAGCCCAGCTACCTGGGAGTCCCCTGGTCCTTTCTCTGCCCCCTAGGGACTCCTGTCTCGGCCCAAACACTGCTCCCCTAACCCAGCCCCCAGCGTCTTCCTACCTCCTTGACCCCCAGACCTGTCCTTCAGTTTCCAAATCTCCCCTGTCAC
.....................................................(((((((((.((((.((...)).)).)).))))...)))))............................................................................................................................................................
..................................................51..............................................99......................................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM532890(GSM532890)
G576T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM532886(GSM532886)
G850T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		GSM532879(GSM532879)
G659N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532888(GSM532888)
G761T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040018(GSM532903)
G701N. (cervix)		SRR040030(GSM532915)
G013N. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
................................................................................................................GGAGTCCCCTGGTCCGCC........................................................................................................................ 181.500.00---0.500.50-----------------------------------------------------------------------0.50---------------------------------------------------------------------------------
............GTGGCTGGGCTGCGTTGTT........................................................................................................................................................................................................................... 191.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TCCTTCAGTTTCCAAACCA.......... 191.000.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................CCCGGGGCGGGGGGCCGCCG........................................................................................................................................................................... 201.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................CAGGCTCCTCTCGAGTTCT.................................................................................................................................................. 191.000.00------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
.................................................................GCGGGGGGCCGGCGCG......................................................................................................................................................................... 161.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CCCCTAACCCAGCCCCGGA............................................................ 191.000.00------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
.....................................................................................CAGGCTCCTCTCGAGACTG.................................................................................................................................................. 191.000.00----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
...............................................................GGGCGGGGGGCCGGCGGCG........................................................................................................................................................................ 191.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................TCGAGCCCAGCTACCCCTG........................................................................................................................................ 191.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.....................................................................GGGGCCGGCGCCGGGGCGGCG................................................................................................................................................................ 211.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................CCGGGGCGGGGGGCCGCCC........................................................................................................................................................................... 191.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGCCGGCGCCGGGGGGGG................................................................................................................................................................. 201.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGGGGGCCCGGGGCGGGGC.................................................................................................................................................................................. 191.000.00---------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................GGGGGCCGGCGCCGGGTCC................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.................................................................GCGGGGGGCCGGCGCCGGGG..................................................................................................................................................................... 201.000.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
................................................................................................................GGAGTCCCCTGGTCCGA......................................................................................................................... 170.500.000.50-------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GGAGTCCCCTGGTCCGAC........................................................................................................................ 180.500.00--------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GGACCAGGGGACTCC........................................................................................................................... 1520.500.50----------------------------------------------------------------------------------------------------------------------------------------0.50---------------------
................................................................................................................GGAGTCCCCTGGTCCG.......................................................................................................................... 160.500.00-------------0.50------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGGGCTGGGTTAGGGGAG............................................................... 1830.330.33------------------------------------------------------------------------------------------------------------------------------------------------0.33-------------