ID: uc001bur.3_intron_9_0_chr1_32694810_f.5p
GENE: (10)
chr1:32694760-32695009+


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(5)
BRAIN 		(2)
BREAST 		(23)
CELL-LINE 		(3)
CERVIX 		(3)
HEART 		(2)
HELA 		(4)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
XRN.ip

Sense strand
GCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTAAAGAAGAAGAGAGCTCTTCCAAATTAAAATCTCATGTGGTGTACCTTTTTTGTTTGTTTTTGTTTTTGAGATGGAGTCTCGCTCTGTCGCCTAGGCTGGAGCGCAGTGGCGTGATCTCTGCTCACTGCAAGCTCTGCCTCCCGGGTTGACGCCATTCTCCTGCCTCAGCGGCCCAGGCGCCCACCACCATGCCTGGC
....................................................................................((((((((....))....((((..((((..((((....(((((((.....)))))))....))))..))))))))..))))))...................................................................................
....................................................................................85.......................................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040034(GSM532919)
G001N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
.........................................................................................TGGTGTACCTTTTTTTTTG..............................................................................................................................................1916.000.00--10.006.00--------------------------------------------------------
.......................CACCAGGATTGGCAAGTTTGAGGCC..........................................................................................................................................................................................................2519.009.00----9.00-------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCCCG..............................................................................278.000.007.001.00----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTTTG...............................................................................................................................................187.000.00--1.006.00--------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGCGTG....................................................................................2717.007.005.002.00----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGCGCC....................................................................................275.000.005.00-----------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGGCGTG....................................................................................2914.004.004.00-----------------------------------------------------------
......................................................................................................................................CTCTGTCGCCTAGGCTGGAGCGCAGTGGCACG....................................................................................324.000.004.00-----------------------------------------------------------
...........................AGGATTGGCAAGTTTGAGGC...........................................................................................................................................................................................................2014.004.00------2.00-----------------------------1.00----1.00------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGCTCG................................................................................253.000.003.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCACCG.............................................................................283.000.00-3.00----------------------------------------------------------
.........................CCAGGATTGGCAAGTTTGA..............................................................................................................................................................................................................1913.003.00------3.00-----------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTCTTT................................................................................................................................273.000.003.00-----------------------------------------------------------
.......................CACCAGGATTGGCAAGTTTGAGGCA..........................................................................................................................................................................................................253.000.00------------3.00-----------------------------------------------
.......................................................................................................................................TCTGTCGCCTAGGCTGGAGCGCAGTGGCACG....................................................................................313.000.003.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGCGGC.......................................................................................242.000.002.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGCGGG....................................................................................272.000.002.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCTGC..............................................................................272.000.002.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCTCGG...................................................................................222.000.002.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGTC.......................................................................................242.000.002.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGATGC.....................................................................................262.000.002.00-----------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGGGG........................................................................................252.000.002.00-----------------------------------------------------------
........................ACCAGGATTGGCAAGTTT................................................................................................................................................................................................................1812.002.00-------2.00----------------------------------------------------
.................................................................................................CTTTTTTGTTTGTTTTTGTTCTGC.................................................................................................................................242.000.001.001.00----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCTGTG...................................................................................222.000.001.001.00----------------------------------------------------------
......................................................................................................................................................................................AGCTCTGCCTCCCGGGTCCGC...............................................212.000.00-2.00----------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGCTGC.....................................................................................282.000.002.00-----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCGCGG...................................................................................232.000.002.00-----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTTGG...............................................................................................................................................182.000.00--1.001.00--------------------------------------------------------
......................................................................................................................................CTCTGTCGCCTAGGCTGGAGCGCAGTGGCGTG....................................................................................3212.002.002.00-----------------------------------------------------------
...................................................................................................................................................................GTGATCTCTGCTCACTGC.....................................................................1802.002.00---------1.00----1.00---------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGT........................................................................................231.000.00---------------1.00--------------------------------------------
................................................................................................CCTTTTTTGTTTGTTTTTTCTC....................................................................................................................................221.000.00-----1.00------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGGGTG.....................................................................................281.000.001.00-----------------------------------------------------------
..........................CAGGATTGGCAAGTTTGAGGCC..........................................................................................................................................................................................................2211.001.00--------------------------1.00---------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGGCGCC....................................................................................291.000.001.00-----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTGTTG..............................................................................................................................................191.000.00--1.00---------------------------------------------------------
.................................................................................................CTTTTTTGTTTGTTTTTGTCCTC..................................................................................................................................231.000.00-1.00----------------------------------------------------------
........................................................................................................................................CTGTCGCCTAGGCTGGAGCGCAGTGGCGTG....................................................................................3011.001.00-------------------------------------------------1.00----------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGGGGC.......................................................................................241.000.001.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGCTTT....................................................................................271.000.001.00-----------------------------------------------------------
..............CACAACCTCCACCAGGATTGGCATGGA.................................................................................................................................................................................................................271.000.00--------------------------------------------1.00---------------
.............................................................................................................................................................................CTCACTGCAAGCTCTGCCTCCCGGGCCC.................................................281.000.001.00-----------------------------------------------------------
......................................................................................................................................................................ATCTCTGCTCACTGCAAGCTCTGCCTCCCCAG....................................................321.000.00-1.00----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGC........................................................................................231.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTCTCT.....................................................................................................................................221.000.001.00-----------------------------------------------------------
...........................AGGATTGGCAAGTTTGAGGCCAGGT......................................................................................................................................................................................................2511.001.00----------------1.00-------------------------------------------
...........................................................................................................................................................GCAGTGGCGTGATCTCTGCTACCT.......................................................................241.000.00------------------------------------------------1.00-----------
...................................................................................................................................................................................................................CCTGCCTCAGCGGCCTAA.....................181.000.00-----------------------------------------------------1.00------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGTCGC.....................................................................................261.000.00-1.00----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTG.................................................................................................................................................1621.001.00--1.00---------------------------------------------------------
......................................................................................................................................................................................AGCTCTGCCTCCCGGGTTGCACC.............................................231.000.00-1.00----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGAGC........................................................................................181.000.00-1.00----------------------------------------------------------
........................ACCAGGATTGGCAAGTTTGAG.............................................................................................................................................................................................................2111.001.00-------------------1.00----------------------------------------
.......................CACCAGGATTGGCAAGTTT................................................................................................................................................................................................................1911.001.00----------1.00-------------------------------------------------
.............CCACAACCTCCACCAGGATTGG.......................................................................................................................................................................................................................2211.001.00-------------------------------------1.00----------------------
.........................................................................................TGGTGTACCTTTTTTTGTG..............................................................................................................................................191.000.00--1.00---------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTCGCG......................................................................................271.000.00-1.00----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGGCCT................................................................................251.000.001.00-----------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGCGGC.......................................................................................261.000.001.00-----------------------------------------------------------
...............................................................................................................................AGTCTCGCTCTGTCGCCTAGGCGGAG.................................................................................................261.000.001.00-----------------------------------------------------------
....................CTCCACCAGGATTGGCAAGTTTG...............................................................................................................................................................................................................2311.001.00--------------------------------------------------1.00---------
......................CCACCAGGATTGGCAAGTTTGAG.............................................................................................................................................................................................................2311.001.00----------1.00-------------------------------------------------
.....................................................................................................................................GCTCTGTCGCCTAGGCTGAAG................................................................................................211.000.00---------------------------------------1.00--------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCGTGC...................................................................................231.000.00-1.00----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCTTT....................................................................................221.000.00-1.00----------------------------------------------------------
..............................................................................................................................................CCTAGGCTGGAGCGCAGTGGAGCC....................................................................................241.000.00-1.00----------------------------------------------------------
...............................................................................................................................................................TGGCGTGATCTCTGCTCACTGAC....................................................................231.000.00-------------------------------------------------------1.00----
.....................TCCACCAGGATTGGCAAGTTTGAGG............................................................................................................................................................................................................2511.001.00-----------------------1.00------------------------------------
......................................................................................................................TTGAGATGGAGTCTCGCTCTGA..............................................................................................................221.000.00----------------------------1.00-------------------------------
............................................................................................................................................CGCCTAGGCTGGAGCGCAGTGGTGG.....................................................................................251.000.00-1.00----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTCGG...............................................................................................................................................181.000.00-----------1.00------------------------------------------------
..............................................................................................................................................CCTAGGCTGGAGCGCAGTGGGGTG....................................................................................241.000.001.00-----------------------------------------------------------
..................................................................................................TTTTTTGTTTGTTTTTGTTTCGCT................................................................................................................................241.000.00-----1.00------------------------------------------------------
..............................................................................................................................................CCTAGGCTGGAGCGCAGTGGCCTG....................................................................................241.000.00-1.00----------------------------------------------------------
...................CCTCCACCAGGATTGGCAA....................................................................................................................................................................................................................1911.001.00-------1.00----------------------------------------------------
.....................................................................................................................................................TGGAGCGCAGTGGCGTGATCTCTGCTCGC........................................................................291.000.00-1.00----------------------------------------------------------
..........................................................................................................................................GTCGCCTAGGCTGGAGCGCAGTGGTGCC....................................................................................281.000.001.00-----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGGGCA....................................................................................221.000.001.00-----------------------------------------------------------
...............................................................................................................TTTGTTTTTGAGATGGAGCG.......................................................................................................................201.000.00-----1.00------------------------------------------------------
.........................CCAGGATTGGCAAGTTTGAG.............................................................................................................................................................................................................2011.001.00-----------------------------------------------1.00------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTCT..................................................................................................................................251.000.00-1.00----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCTGCA.............................................................................281.000.001.00-----------------------------------------------------------
.....................TCCACCAGGATTGGCAAGTT.................................................................................................................................................................................................................2011.001.00---------------------------------------------------------1.00--
..................................................................................................................GTTTTTGAGATGGAGCTCG.....................................................................................................................191.000.00------------------------------------------------------1.00-----
..........................................................................................................................................................CGCAGTGGCGTGATCTCTGCTCACCGC.....................................................................271.000.001.00-----------------------------------------------------------
...............................................................................................................................AGTCTCGCTCTGTCGCCTAGGCTGGAGCC..............................................................................................291.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTTTTTGG..............................................................................................................................291.000.00-1.00----------------------------------------------------------
.........................................................................................................................................................................TCTGCTCACTGCAAGC.................................................................1601.001.00------------------------------1.00-----------------------------
.........................................................................................TGGTGTACCTTTTTTTGCT..............................................................................................................................................191.000.00--1.00---------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGTGCT....................................................................................271.000.001.00-----------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGGGG......................................................................................271.000.001.00-----------------------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCGGGTCCGC...............................................271.000.001.00-----------------------------------------------------------
..........................................................................................................................................GTCGCCTAGGCTGGAGCGCAGTGGG.......................................................................................251.000.001.00-----------------------------------------------------------
................................................................................................CCTTTTTTGTTTGTTTTCTGG.....................................................................................................................................211.000.00-1.00----------------------------------------------------------
......................................................................................................................................................GGAGCGCAGTGGCGTGCAC.................................................................................191.000.00---------------------1.00--------------------------------------
....................................................................................................................................................CTGGAGCGCAGTGGCGTGATCTCCCAG...........................................................................271.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTCTTT..................................................................................................................................251.000.001.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGGCT.................................................................................241.000.00--------------------1.00---------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGCCC.................................................................................241.000.001.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGAGC...................................................................................221.000.00-1.00----------------------------------------------------------
.....................TCCACCAGGATTGGCAAGTTTGAGGCC..........................................................................................................................................................................................................2711.001.00-------------1.00----------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCCCC..............................................................................271.000.001.00-----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCGTGTTT.................................................................................251.000.001.00-----------------------------------------------------------
............................................................................................................................................................................GCTCACTGCAAGCTCTGCCTCCCGGGTCCGC...............................................311.000.00-----1.00------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTTGTT..............................................................................................................................................191.000.00--1.00---------------------------------------------------------
........................ACCAGGATTGGCAAGTTTGAGGCC..........................................................................................................................................................................................................2411.001.00----------------1.00-------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCC......................................................................................201.000.00-1.00----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGCTCC....................................................................................221.000.001.00-----------------------------------------------------------
.....................................................................................................................................................TGGAGCGCAGTGGCGTGAGCTC...............................................................................221.000.00-1.00----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGG.......................................................................................241.000.001.00-----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGGTGTG....................................................................................271.000.001.00-----------------------------------------------------------
................................................................................................................................................TAGGCTGGAGCGCAGTGGTTCC....................................................................................221.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTCTTC................................................................................................................................271.000.001.00-----------------------------------------------------------
.......................................................................................................................................TCTGTCGCCTAGGCTGGAGCGCAGTGGCACC....................................................................................311.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTC...................................................................................................................................241.000.001.00-----------------------------------------------------------
....................................................................................................TTTTGTTTGTTTTTGTTTTTGGTTC.............................................................................................................................251.000.00-1.00----------------------------------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGTGACAC.....................................................................................261.000.001.00-----------------------------------------------------------
...........................AGGATTGGCAAGTTTGAGG............................................................................................................................................................................................................1911.001.00----------------------------------1.00-------------------------
...........................................................................................................................................................................TGCTCACTGCAAGCTCTGCCTCCCGGGTCTGC...............................................321.000.00-1.00----------------------------------------------------------
..........................CAGGATTGGCAAGTTTGA..............................................................................................................................................................................................................1821.001.00----------------------------------------------------------0.500.50
..............................................................................................................................................CCTAGGCTGGAGCGCAGTGGTGAG....................................................................................241.000.001.00-----------------------------------------------------------
.........................................................................................TGGTGTACCTTTTTTGTC...............................................................................................................................................181.000.00---1.00--------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTCTTT....................................................................................................................................231.000.00-----1.00------------------------------------------------------
.........................................................................................................................................TGTCGCCTAGGCTGGAGCGCAGTGGCGAG....................................................................................291.000.001.00-----------------------------------------------------------
...............................................................................................................................................CTAGGCTGGAGCGCAGTG.........................................................................................1801.001.00------------------------------------------1.00-----------------
............................................................................................................................................................................GCTCACTGCAAGCTCTGCCTCCCGGGTCCG................................................301.000.00-----1.00------------------------------------------------------
........................................................................................................................................................................................................................................CCCACCACCATGCCTGTCGA201.000.00-------------------------1.00----------------------------------
................................................................................................CCTTTTTTGTTTGTTTTTTACG....................................................................................................................................221.000.001.00-----------------------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCGGGTCCAG...............................................271.000.00-1.00----------------------------------------------------------
...............ACAACCTCCACCAGGATTGGCA.....................................................................................................................................................................................................................2211.001.00-------1.00----------------------------------------------------
.........................CCAGGATTGGCAAGTTTGAGGC...........................................................................................................................................................................................................2211.001.00--------------------------------------1.00---------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAGCGAC.......................................................................................241.000.001.00-----------------------------------------------------------
.........................................................................................................................................................................TCTGCTCACTGCAAGCGGC..............................................................1901.001.001.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCTCCG...................................................................................221.000.001.00-----------------------------------------------------------
.........................................................................................................................................................................TCTGCTCACTGCAAGCTCTGCCTTT........................................................251.000.00----------------------------------------------1.00-------------
...................CCTCCACCAGGATTGGCA.....................................................................................................................................................................................................................1811.001.00-------------1.00----------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCCCGG.............................................................................281.000.001.00-----------------------------------------------------------
.......................................................................................................................................TCTGTCGCCTAGGCTGGAGCGCAGTGGAGC.....................................................................................301.000.001.00-----------------------------------------------------------
...............................................................................................ACCTTTTTTGTTTGTTTTTGTTTGTT.................................................................................................................................261.000.001.00-----------------------------------------------------------
.....................................................................................................................TTTGAGATGGAGTCTCGCTCTGTCGCGCG........................................................................................................291.000.00-1.00----------------------------------------------------------
.............................................................................................................................................................AGTGGCGTGATCTCTGCTAAT........................................................................211.000.00---------------------------1.00--------------------------------
...........................................................................................................................................TCGCCTAGGCTGGAGCGCAT...........................................................................................201.000.00-1.00----------------------------------------------------------
....................................................AAAGAAGAAGAGAGCTCTG...................................................................................................................................................................................191.000.00----------1.00-------------------------------------------------
.....................................................................................................................................................................................AAGCTCTGCCTCCCGGGTCCGC...............................................221.000.001.00-----------------------------------------------------------
.................................................................................................................................................AGGCTGGAGCGCAGTGGCGTGATCTCTGCTC..........................................................................3170.290.290.140.14----------------------------------------------------------
...................................................................................................................................TCGCTCTGTCGCCTAGGCTGGAGCGCAGTGG........................................................................................3150.200.200.20-----------------------------------------------------------
........................................................................................................................................................AGCGCAGTGGCGTGATCTCTGCTCACTG......................................................................2860.170.170.17-----------------------------------------------------------
...................................................................................................................................................GCTGGAGCGCAGTGGCGTGATCTCTGCTC..........................................................................2970.140.14-0.14----------------------------------------------------------
....................................................................................................................................................CTGGAGCGCAGTGGCGTGATCTCTGCTC..........................................................................2870.140.140.14-----------------------------------------------------------

Antisense strand
GCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTAAAGAAGAAGAGAGCTCTTCCAAATTAAAATCTCATGTGGTGTACCTTTTTTGTTTGTTTTTGTTTTTGAGATGGAGTCTCGCTCTGTCGCCTAGGCTGGAGCGCAGTGGCGTGATCTCTGCTCACTGCAAGCTCTGCCTCCCGGGTTGACGCCATTCTCCTGCCTCAGCGGCCCAGGCGCCCACCACCATGCCTGGC
....................................................................................((((((((....))....((((..((((..((((....(((((((.....)))))))....))))..))))))))..))))))...................................................................................
....................................................................................85.......................................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040034(GSM532919)
G001N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
...............................TTGGCAAGTTTGAGGCCAGA....................................................................................................................................................................................................... 202.000.00-----------2.00------------------------------------------------
....................................................................................................................................................................................CAAGCTCTGCCTCCCGGGTTAAT............................................... 232.000.00------------------1.00--------------------------1.00--------------
......................................................................................................................................................................................CAACCCGGGAGGCAGAGCT................................................. 1902.002.00--------2.00---------------------------------------------------
.............................................................................................................................GGAGTCTCGCTCTGTCGCCTAGGCTCCCC................................................................................................ 292.000.00-2.00----------------------------------------------------------
..................................................................................................................................................................................TGCAAGCTCTGCCTCCCGGGTTTTGG.............................................. 261.000.00-----------------------------------1.00------------------------
...............................................................................................................................................................................CACTGCAAGCTCTGCCTCCCGGGTTTTTC.............................................. 291.000.00---------------1.00--------------------------------------------
..............................................................................................................................GAGTCTCGCTCTGTCGCCTAGGCTAGG................................................................................................. 271.000.00-1.00----------------------------------------------------------
.................................................................................................................................................................................CTGCAAGCTCTGCCTCCCGGGTTA................................................. 241.000.00--------1.00---------------------------------------------------
........................................................................................................................................................................CTCTGCTCACTGCAAGCTCTGCCTCTCG...................................................... 281.000.00-----1.00------------------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCGAGA................................................... 231.000.00-----------------------------1.00------------------------------
.................................................................................................................................TCTCGCTCTGTCGCCTAAGAA.................................................................................................... 211.000.00----------------------------------------1.00-------------------
..................................................................................................................................................................................................CGGGTTGACGCCATTCTCCTGCGA................................ 241.000.00--------------------------------------------------------1.00---
...............................................................................................................................................................................CACTGCAAGCTCTGCCTCCCGGCG................................................... 241.000.00------1.00-----------------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCTGCCTCCCGAAAA.................................................. 241.000.00---------1.00--------------------------------------------------
............ACCACAACCTCCACCAAT............................................................................................................................................................................................................................ 181.000.00---------------------------------1.00--------------------------
.............................................................................................................................................................................CTCACTGCAAGCTCTGCCTCCCGGGTTGGAG.............................................. 311.000.001.00-----------------------------------------------------------
.............................................................................................................................................................................CTCACTGCAAGCTCTGCCTCCCGAA.................................................... 251.000.00--------------------1.00---------------------------------------
...................................................................................................................................TCCAGCCTAGGCGACAGAGCGA................................................................................................. 2201.001.00--------------1.00---------------------------------------------
..................................................................................................................................CCTAGGCGACAGAGCGAG...................................................................................................... 1801.001.00------------------------1.00-----------------------------------
..................................................................................................................GTTTTTGAGATGGAGTCTCGCTCTGTCGCCAT........................................................................................................ 321.000.00-------------------------------1.00----------------------------
............................................................................................................................TGGAGTCTCGCTCTGTCGCCTCCC...................................................................................................... 241.000.001.00-----------------------------------------------------------
...............................................................................................................TTTGTTTTTGAGATGGAGTCTCGCTCTGTTAAG.......................................................................................................... 331.000.00-----1.00------------------------------------------------------
..................................................................................................................................................GGCTGGAGCGCAGTGGCGTAGGC................................................................................. 231.000.001.00-----------------------------------------------------------
...................................................................................................................................CAGCCTAGGCGACAGAGCGA................................................................................................... 2001.001.00-----------------1.00------------------------------------------
......................................................................................................................................................................................................TTGACGCCATTCTCCTTA.................................. 181.000.00-------1.00----------------------------------------------------
............................................................................................................................TGGAGTCTCGCTCTGTCGCGCGC....................................................................................................... 231.000.00-1.00----------------------------------------------------------
.............CCACAACCTCCACCAATA........................................................................................................................................................................................................................... 181.000.00----------------------1.00-------------------------------------
...............................................................................................................................................................................CACTGCAAGCTCTGCCTCCCGCGA................................................... 241.000.00-------------------1.00----------------------------------------
...............................................................................................................................................................GCAGTGAGCAGAGATCACGCCA..................................................................... 2201.001.00-----------------1.00------------------------------------------
..............................................................................................................................................................................TCACTGCAAGCTCTGCCTCCCGGTAA.................................................. 261.000.00--------------------------------1.00---------------------------
.........................................................................................................................................................GCGCAGTGGCGTGATCACA.............................................................................. 191.000.001.00-----------------------------------------------------------
.............................................................................................................................GGAGTCTCGCTCTGTCGCCTTCTC..................................................................................................... 241.000.001.00-----------------------------------------------------------
...............................................................................................................................AGTCTCGCTCTGTCGCCTAGTAA.................................................................................................... 231.000.00----------------------------------------------------1.00-------
.............................................................................................................................GGAGTCTCGCTCTGTCGCCTCCC...................................................................................................... 231.000.00-1.00----------------------------------------------------------
............................................................................................................................TGGAGTCTCGCTCTGTCGCCTCCCC..................................................................................................... 251.000.001.00-----------------------------------------------------------
........................................................................................................................................................................................................GACGCCATTCTCCTGCCTGTAT............................ 221.000.00-------------------------------------------1.00----------------
...............................................................................................................................AGTCTCGCTCTGTCGCCTTTAC..................................................................................................... 221.000.00-1.00----------------------------------------------------------
..................................................................................................................................................GGCTGGAGCGCAGTGGCGTGATGGG............................................................................... 251.000.001.00-----------------------------------------------------------
..................................................................................................................................................GGCTGGAGCGCAGTGGCGTGATGGCG.............................................................................. 261.000.001.00-----------------------------------------------------------
.................................................................................................................................................................................CTGCAAGCTCTGCCTCCCGGAA................................................... 221.000.00------------------1.00-----------------------------------------
.........................................................................................................................................................GCGCAGTGGCGTGATCTCTATCA.......................................................................... 231.000.00--1.00---------------------------------------------------------
............................................................................................................................TGGAGTCTCGCTCTGTCGCCTACGC..................................................................................................... 251.000.00-1.00----------------------------------------------------------
....................................................................................................................................................................................CAAGCTCTGCCTCCCGGGTTAA................................................ 221.000.00--------1.00---------------------------------------------------
......................................................................................................................................................................................AGCTCTGCCTCCCGGGTTGACGC............................................. 231.000.00-1.00----------------------------------------------------------
.................................................................................................................................CCTAGGCGACAGAGCGAGA...................................................................................................... 1901.001.00---------1.00--------------------------------------------------
..............................................................................................................................................CCTAGGCTGGAGCGCAGTGGCGTGATTG................................................................................ 281.000.001.00-----------------------------------------------------------
.......................................................................................................................................................................................GCTCTGCCTCCCGGGTTGACGGC............................................ 231.000.00-1.00----------------------------------------------------------
....................................................................................................................................................................................................................CTGCCTCAGCGGCCCCTGT................... 191.000.00---------------------------------------------------1.00--------