ID: uc001buo.3_intron_0_0_chr1_32680651_r
GENE: TMEM234(10)
chr1:32680601-32680786-


(1)
AGO2.ip 		(1)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(2)
LIVER 		(2)
OTHER 		(4)
SKIN 		(1)
TESTES

Sense strand
AGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGGTCAGTACCAGCTTTTTTTTTTTTTACGGGCAGTCTCCTGAGCCACAGTAGGTTCAGACTCCTTTATCTTTTTTTTTTTTTTCCAGTGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGACATCCCCAACAACA
..........................................................................((.(((.((((...((((((......))))))))))))).))......................................................................
.........................................................58............................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787GSM532880(GSM532880)
G659T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTAATT..................................................2760.000.0028.0030.002.00----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTAATT...................................................2643.000.0020.0019.003.00-1.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTAATT.....................................................2438.000.0019.0014.00--5.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTAATT....................................................2530.000.0018.0012.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTAATT......................................................2317.000.009.006.001.00-1.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTATTT...................................................2610.000.005.004.001.00----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTTTTAATT..................................................2610.000.006.004.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTATTT..................................................277.000.005.002.00-----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTTAATT....................................................246.000.006.00------------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTAAAG...................................................245.000.002.003.00-----------------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTTTTCCAG...................................................284.000.003.001.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTAAG......................................................214.000.001.001.00--2.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTAAT...................................................264.000.002.002.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTAAAG.....................................................224.000.002.002.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTAATA....................................................253.000.002.001.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTAAAT..................................................253.000.00-2.001.00----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTAAAT...................................................243.000.001.002.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTATT...................................................263.000.003.00------------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTTAAT..................................................273.000.002.001.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTAAAT..................................................272.000.00-2.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTCAAG...................................................242.000.00--1.00-1.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTATTG.....................................................242.000.00-2.00-----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTTTG......................................................222.000.00----2.00--------------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTTTTCCC....................................................272.000.00---2.00---------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTAAT.....................................................242.000.002.00------------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTTTG...................................................262.000.001.001.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTAAAG..................................................252.000.001.00-1.00----------------
...............................................................................................................CTTTATCTTTTTTTTTTAG........................................................192.000.00-1.00--1.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTATTG....................................................252.000.001.001.00-----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCGGC.................................................222.000.00---2.00---------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTATTG..................................................272.000.00-2.00-----------------
..............................................................................................................CCTTTATCTTTTTTTTTTAATT......................................................222.000.001.001.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTTATT..................................................272.000.001.001.00-----------------
..............................................................TTTTTTTTTTTTTACGGGCACCGC....................................................................................................241.000.00-----1.00-------------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTCCAG......................................................251.000.00----1.00--------------
....................................................................................................................TCTTTTTTTTTTTTTTCCAGTGCTGTG...........................................271.000.00---1.00---------------
................................................................TTTTTTTTTTTACGGGCCG.......................................................................................................191.000.00-----1.00-------------
...................................................................................................................ATCTTTTTTTTTTTTTTCGGTT.................................................221.000.00---1.00---------------
...............................................................................................................CTTTATCTTTTTTTTTTTCTTG.....................................................221.000.00--1.00----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTTTATTT...................................................251.000.001.00------------------
.......................................................TACCAGCTTTTTTTTTTTCCG..............................................................................................................211.000.00--------------1.00----
.........AGGATATACAGACGGGGGCAG............................................................................................................................................................2111.001.00--------1.00----------
...............................................................................................................CTTTATCTTTTTTTTTTAATG......................................................211.000.00-1.00-----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCGCAG.................................................221.000.00---1.00---------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTAATA..................................................271.000.001.00------------------
.............................................................CTTTTTTTTTTTTTACGTTCC........................................................................................................211.000.00---1.00---------------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTTTTTTTTA..................................................291.000.001.00------------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTCTTTG.................................................261.000.001.00------------------
....................ACGGGGGCAGCTGGAGACAGCT................................................................................................................................................221.000.00-----1.00-------------
........CAGGATATACAGACGGGGGCAG............................................................................................................................................................2211.001.00------------1.00------
............................................................................................................................................GGCTTTGTGTCTGAGCATTCTGCTC.....................2511.001.00---------------1.00---
...........................................................................................................ACTCCTTTATCTTTTTTTTTTTCCAG.....................................................261.000.00--1.00----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTATTT.....................................................241.000.001.00------------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTCTTG...................................................241.000.00--1.00----------------
..............................................................................................................CCTTTATCTTTTTTTTTTGATT......................................................221.000.001.00------------------
.............................................................................................................TCCTTTATCTTTTTTTTTTATT.......................................................221.000.00--1.00----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTAG.....................................................241.000.001.00------------------
..........................................................................................................................................CCGGCTTTGTGTCTGAGC..............................1811.001.00-------------1.00-----
............................................................................................................CTCCTTTATCTTTTTTTTTTTTTTTTG...................................................271.000.001.00------------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCAGGG................................................231.000.00---1.00---------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTG......................................................231.000.00-1.00-----------------
......................................AGTTATGATGAGGTCCCAC.................................................................................................................................191.000.00---------1.00---------
.....................................................................................................................CTTTTTTTTTTTTTTCCAGTGTGAT............................................251.000.00-1.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTATAG.....................................................221.000.00--1.00----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCGTCC.................................................221.000.00---1.00---------------
...............................................................................................................CTTTATCTTTTTTTTTTAAAT......................................................211.000.00-1.00-----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTTTTATTT..................................................261.000.001.00------------------
.....................................................................................................................CTTTTTTTTTTTTTTCCAGTGGGAG............................................251.000.00-1.00-----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCGGAG................................................231.000.00---1.00---------------
.....................................................AGTACCAGCTTTTTTTTTTTTCGAG............................................................................................................251.000.00-----1.00-------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTCTAAG.................................................261.000.00--1.00----------------
...............................................................................................................CTTTATCTTTTTTTTTTATAG......................................................211.000.00-1.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTATTG...................................................261.000.00-1.00-----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCGG..................................................211.000.00---1.00---------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTATAA..................................................251.000.00-1.00-----------------
................................................................................................................TTTATCTTTTTTTTTTTTTTCGCC..................................................241.000.00---1.00---------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCAAAT................................................231.000.00-1.00-----------------
...................................................................................................................ATCTTTTTTTTTTTTTTCCAGAG................................................231.000.00---1.00---------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTAAG.....................................................241.000.00-1.00-----------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTATT....................................................251.000.00----1.00--------------
.............................................................................................................TCCTTTATCTTTTTTTTTTATTT......................................................231.000.00-1.00-----------------
.................................................................................................................TTATCTTTTTTTTTTTTTTCCCGG.................................................241.000.00---1.00---------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTCCAGG.................................................2611.001.00--1.00----------------
..............................................................................................................CCTTTATCTTTTTTTTTTAAT.......................................................211.000.00-1.00-----------------
.......................................................TACCAGCTTTTTTTTTTTGGTT.............................................................................................................221.000.00--1.00----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTGTT....................................................231.000.00--1.00----------------
..............................................................................................................CCTTTATCTTTTTTTTTTTATTT.....................................................231.000.001.00------------------
..................................................................................................................TATCTTTTTTTTTTTTTTCGC...................................................211.000.00-----1.00-------------
..............................................................................................................CCTTTATCTTTTTTTTTTTAATA.....................................................231.000.001.00------------------
....................................................................................................................TCTTTTTTTTTTTTTTCCAGTAG...............................................231.000.00-----1.00-------------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTCCAT......................................................251.000.00-1.00-----------------
......................................................................................................................TTTTTTTTTTTTTTCCAGTGAATG............................................241.000.00------1.00------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTAAAT.....................................................241.000.001.00------------------
................................................................................................................TTTATCTTTTTTTTTTTTTTCGGG..................................................241.000.00-----1.00-------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTAAT......................................................231.000.00-1.00-----------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTATG...................................................241.000.001.00------------------
.............................................................................................................TCCTTTATCTTTTTTTTTTTTTTAT....................................................251.000.00-1.00-----------------
.........AGGATATACAGACGGGGGCAGCTGGAGACAG..................................................................................................................................................3111.001.00-------1.00-----------
...........................................................................................................ACTCCTTTATCTTTTTTTTTTTTTTTCTG..................................................291.000.00------1.00------------
...............................................................................................................CTTTATCTTTTTTTTTTTTTTCCAG..................................................2511.001.001.00------------------
..............................................................TTTTTTTTTTTTTACGGGCAT.......................................................................................................211.000.00-----1.00-------------
...........................................................................................................ACTCCTTTATCTTTTTTTTT...........................................................2020.500.50------0.50------------
.................................................................TTTTTTTTTTACGGGCA........................................................................................................1730.330.33-----0.33-------------
...................................GACAGTTATGATGAG........................................................................................................................................1550.200.20------------------0.20
....................................................................................................................TCTTTTTTTTTTTTTTCCAGTG................................................2260.170.17-----0.17-------------

Antisense strand
AGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGGTCAGTACCAGCTTTTTTTTTTTTTACGGGCAGTCTCCTGAGCCACAGTAGGTTCAGACTCCTTTATCTTTTTTTTTTTTTTCCAGTGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGACATCCCCAACAACA
..........................................................................((.(((.((((...((((((......))))))))))))).))......................................................................
.........................................................58............................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787GSM532880(GSM532880)
G659T. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.................................................................................................................................................TGTGTCTGAGCATTCTCGG...................... 191.000.00----------1.00--------
..............................................................TTTTTTTTTTTTTACGGTTT........................................................................................................ 201.000.00-----------1.00-------
..............................................................................................................CCTTTATCTTTTTTTCCGG......................................................... 191.000.00----------------1.00--
..................................................................GCCCGTAAAAAAAAA......................................................................................................... 1540.250.25-----------------0.25-