ID: uc001buc.1_intron_8_0_chr1_32508321_f.5p
GENE: KHDRBS1(9)
chr1:32508271-32508520+


(1)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(6)
BREAST 		(14)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(2)
HELA 		(5)
LIVER 		(2)
OTHER 		(21)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGATTTCTTGTATCTCCCAGGATTCCTGTTGCTTTACCCACAACAGACAAGTAATTGTCTAAGTGTTTTTCTTCGTGGTCCCCTTCTTCTCCCCACCTTATTCCATTCTTAACTCTGCATTCTGGCTTCTGTATGTAGTATTTTAAAATGAGTTAAAATAGATTTAGGAATATTGAATTAATTTTTTAAGTGTGTAGATGCTTTTTTCTTTGTTGTTTAAATATAAACAGAAGTGTACCTTTTATAATAA
.......................................................................................................................((((((..(((((......((((....)))).......))))).)))))).................................................................................
.......................................................................................................................120.................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040042(GSM532927)
G428N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
......................................................................................................................................................AGTTAAAATAGATTTAGG..................................................................................18113.0013.00----12.001.00------------------------------------------------------------
............................................................................................................................GCTTCTGTATGTAGTGGTT...........................................................................................................1912.000.00--------------1.002.00--1.00----2.00------1.00---------1.00------------1.001.00---1.00--1.00----
.......................................................................................................................................................GTTAAAATAGATTTAGGAATATTGAATTAATTTTTTAAGTGTGTAGATGC.................................................5014.004.00--------4.00---------------------------------------------------------
...........................................................................................................................................................AAATAGATTTAGGAATATTGAAA........................................................................234.000.00-4.00----------------------------------------------------------------
..................................................................................................................................GTATGTAGTATTTTAAAATGAGTT................................................................................................2414.004.00-4.00----------------------------------------------------------------
.............................................................................................................................................................ATAGATTTAGGAATATTG...........................................................................1813.003.00-3.00----------------------------------------------------------------
........................................................................................................................................................TTAAAATAGATTTAGGAATATTGAATTAATT...................................................................3113.003.00-------3.00----------------------------------------------------------
...............................................................................................................................................................AGATTTAGGAATATTGAATTAA.....................................................................2213.003.00---1.00--2.00-----------------------------------------------------------
................................................................................................................CTCTGCATTCTGGCTTCTGTATGTAGTA..............................................................................................................2813.003.00-----3.00------------------------------------------------------------
............................................................................................................TTAACTCTGCATTCTGGCT...........................................................................................................................1912.002.00---1.00-------------------------------------------1.00------------------
........................................................................TCGTGGTCCCCTTCTTCTCCCCAC..........................................................................................................................................................2412.002.00---2.00--------------------------------------------------------------
..ATTTCTTGTATCTCCCAGG.....................................................................................................................................................................................................................................1912.002.00-------------2.00----------------------------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTTTGTTGTC.................................292.000.002.00-----------------------------------------------------------------
..........................................................................................................................TGGCTTCTGTATGTAGTA..............................................................................................................1812.002.00---------------------------------------------------------1.00-1.00------
..........................................................................................................................................................................TATTGAATTAATTTTTTAAGTGTGTAGATG..................................................3012.002.00--2.00---------------------------------------------------------------
.......................................................................................................................................................................................TTTTAAGTGTGTAGATGCTTTTTTCTTTGTTGT..................................3312.002.002.00-----------------------------------------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTTTGTTGTT.................................2912.002.002.00-----------------------------------------------------------------
.............................................................................................................................................................ATAGATTTAGGAATATTGAA.........................................................................2012.002.00-----2.00------------------------------------------------------------
................................................................................................................................................................................................TGTAGATGCTTTTTTCTTTGTTGCT.................................2512.001.001.00-1.00---------------------------------------------------------------
...........................................................................................................................................................................................AAGTGTGTAGATGCTTTTTTCTTTGTTGTC.................................302.000.00--2.00---------------------------------------------------------------
..................................................................................................................................................AATGAGTTAAAATAGATTTAGG..................................................................................2212.002.00-1.00-----------------------------------------------------1.00----------
.....................................................................................................TCCATTCTTAACTCTGCATTCTG..............................................................................................................................2312.002.00---------------------1.00-------1.00------------------------------------
.......................................................................................................................................................................................TTTTAAGTGTGTAGATGCTTTTTTCTTCGT.....................................301.000.00--1.00---------------------------------------------------------------
....................................................................................................................GCATTCTGGCTTCTGTATGTAG................................................................................................................2211.001.00-----------------1.00------------------------------------------------
...........................................................................TGGTCCCCTTCTTCTCCCCACCTTACTCC..................................................................................................................................................291.000.00-------1.00----------------------------------------------------------
....................................................................TTCTTCGTGGTCCCCTTCTTCTCC..............................................................................................................................................................2411.001.00---1.00--------------------------------------------------------------
.....................................................................................CTTCTCCCCACCTTATTCCATTCTTAACTCTG.....................................................................................................................................3211.001.00----------------------------------------------------------------1.00-
.............................................................................................................TAACTCTGCATTCTGGCT...........................................................................................................................1811.001.00----------1.00-------------------------------------------------------
........................................................................................CTCCCCACCTTATTCCATTCTTAATT........................................................................................................................................261.000.00------------------------1.00-----------------------------------------
..ATTTCTTGTATCTCCCAG......................................................................................................................................................................................................................................1811.001.00------------------------------------------1.00-----------------------
..................AGGATTCCTGTTGCTTTACCCA..................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------1.00--
.............................................................................................................................................TTTAAAATGAGTTAAAATAGATTTAGGAAA...............................................................................301.000.00----------------------------------1.00-------------------------------
...........................................................................................................................................................AAATAGATTTAGGAATATTGAATT.......................................................................2411.001.00------1.00-----------------------------------------------------------
.................................................AGTAATTGTCTAAGTGTTTTTCTTCG...............................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------
..........................................................................................................................................................................................TAAGTGTGTAGATGCTTTTTTCTTTGTTGTTTA...............................3311.001.001.00-----------------------------------------------------------------
.....................................................................................................................CATTCTGGCTTCTGTATGTAGTATTTTAA........................................................................................................2911.001.001.00-----------------------------------------------------------------
...............................................................................................................ACTCTGCATTCTGGCTTCTGTATGTAG................................................................................................................2711.001.00--1.00---------------------------------------------------------------
........TGTATCTCCCAGGATTCCTGTTGCT.........................................................................................................................................................................................................................2511.001.00--------------------1.00---------------------------------------------
.......................................................................................................................TTCTGGCTTCTGTATGTAGTATTTCAA........................................................................................................271.000.001.00-----------------------------------------------------------------
....................................................................TTCTTCGTGGTCCCCTTCTTCTCCCC............................................................................................................................................................2611.001.00---------1.00--------------------------------------------------------
.................CAGGATTCCTGTTGCTTTACCC...................................................................................................................................................................................................................2211.001.00---1.00--------------------------------------------------------------
.............................................GACAAGTAATTGTCTAAGTGTTTT.....................................................................................................................................................................................2411.001.00---------1.00--------------------------------------------------------
..........................................................................................................................................................AAAATAGATTTAGGAATATTGAATTA......................................................................2611.001.00----------1.00-------------------------------------------------------
..........................................................................................................................................................................................TAAGTGTGTAGATGCTTTCTTC..........................................221.000.00--1.00---------------------------------------------------------------
................................................................................................................................................................................................TGTAGATGCTTTTTTCTTTGTCGTC.................................251.000.00--1.00---------------------------------------------------------------
.........................................................................................................TTCTTAACTCTGCATTCTGGCT...........................................................................................................................2211.001.00---1.00--------------------------------------------------------------
..................AGGATTCCTGTTGCTTTACC....................................................................................................................................................................................................................2011.001.00---1.00--------------------------------------------------------------
................................................................................................................................................................................................TGTAGATGCTTTTTTCTTTGTTG...................................2311.001.001.00-----------------------------------------------------------------
............................................................................................................TTAACTCTGCATTCTGGCTTCTG.......................................................................................................................2311.001.00---1.00--------------------------------------------------------------
...............................................................................................................ACTCTGCATTCTGGCTTCTGTATG...................................................................................................................2411.001.001.00-----------------------------------------------------------------
...................................................................................................................TGCATTCTGGCTTCTGTATGTAGTATTCT..........................................................................................................291.000.00--1.00---------------------------------------------------------------
................CCAGGATTCCTGTTGGCCC.......................................................................................................................................................................................................................191.000.00----------------1.00-------------------------------------------------
.....................................................................................................................................................................................TTTTTTAAGTGTGTAGATG..................................................1911.001.00-1.00----------------------------------------------------------------
.GATTTCTTGTATCTCCCAGGA....................................................................................................................................................................................................................................2111.001.00-------------1.00----------------------------------------------------
....................................................................................................................................................................................ATTTTTTAAGTGTGTAGATGCTTTCCTC..........................................281.000.00--1.00---------------------------------------------------------------
..........................................................................................................................................................AAAATAGATTTAGGAATATTG...........................................................................2111.001.00------1.00-----------------------------------------------------------
....................................................................................................................................ATGTAGTATTTTAAAATGAG..................................................................................................2011.001.00-1.00----------------------------------------------------------------
.....................................................................................................................................................GAGTTAAAATAGATTTAGGAAT...............................................................................2211.001.00---1.00--------------------------------------------------------------
................................................................................................................................................................................................TGTAGATGCTTTTTTCTTTGTCGTT.................................251.000.00--1.00---------------------------------------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTTTGTTGTTTA...............................3111.001.00--1.00---------------------------------------------------------------
.............................................................................................................TAACTCTGCATTCTGGCTT..........................................................................................................................1911.001.00---------------------1.00--------------------------------------------
...............................................................................................................ACTCTGCATTCTGGCTTCT........................................................................................................................1911.001.00------------------------------------------------1.00-----------------
........................................................................................................ATTCTTAACTCTGCATTCTGGCTT..........................................................................................................................2411.001.00------1.00-----------------------------------------------------------
....................................................................................TCTTCTCCCCACCTTATTCCATTCTT............................................................................................................................................2611.001.00--------------------1.00---------------------------------------------
.............................................................................................................TAACTCTGCATTCTGGC............................................................................................................................1711.001.00---------1.00--------------------------------------------------------
.............................................................................................................................................................ATAGATTTAGGAATATGGAA.........................................................................201.000.00-----1.00------------------------------------------------------------
.........................................................................................................................CTGGCTTCTGTATGTAGTAT.............................................................................................................2011.001.00--------------------------------1.00---------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTTTGTCGT..................................281.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................AAATAGATTTAGGAATATTG...........................................................................2011.001.00-------------------------------------------------1.00----------------
.....................................................................................................................CATTCTGGCTTCTGTATG...................................................................................................................1811.001.00----------------1.00-------------------------------------------------
.......................................................................................................................TTCTGGCTTCTGTATGTAG................................................................................................................1911.001.00----------------------------------------------1.00-------------------
..............................................................................................................................................................................................TGTGTAGATGCTTTTTTCTTTG......................................2211.001.00------------------------------------------------------------1.00-----
......................................................................................................................................................AGTTAAAATAGATTTAGGAATATTG...........................................................................2511.001.00---------------------------------------------1.00--------------------
..............................................................................................................AACTCTGCATTCTGGCTT..........................................................................................................................1811.001.00------------1.00-----------------------------------------------------
..........................................................................................................TCTTAACTCTGCATTCTGGC............................................................................................................................2011.001.00------------------1.00-----------------------------------------------
........................................................................................................ATTCTTAACTCTGCATTCTGGCTTC.........................................................................................................................2511.001.00------1.00-----------------------------------------------------------
.....................................................................................................TCCATTCTTAACTCTGCATTCTGGCTTC.........................................................................................................................2811.001.00--------------------------------------------1.00---------------------
.......................................................................................................CATTCTTAACTCTGCATT.................................................................................................................................1811.001.00-1.00----------------------------------------------------------------
....................................................................................................................................................TGAGTTAAAATAGATTTAGGAATAT.............................................................................2511.001.00-----------------------------------------1.00------------------------
............................................................................................................TTAACTCTGCATTCTGGCTTC.........................................................................................................................2111.001.00---1.00--------------------------------------------------------------
...........................................................................................................................................................................................AAGTGTGTAGATGCTTTA.............................................181.000.00------------------------------------1.00-----------------------------
.......................................................................................................................................................................................TTTTAAGTGTGTAGATGC.................................................1811.001.00-1.00----------------------------------------------------------------
........................................................................................................................................................................AATATTGAATTAATTTTTTAAGTGTGTAGATG..................................................3211.001.00-------1.00----------------------------------------------------------
..............TCCCAGGATTCCTGTTGCTTTACCCAC.................................................................................................................................................................................................................2711.001.00---------------------------1.00--------------------------------------
....................................................................................................................................................................................ATTTTTTAAGTGTGTAGATGCTTTTCTCT.........................................291.000.001.00-----------------------------------------------------------------
.........................................................................................................................CTGGCTTCTGTATGTAGT...............................................................................................................1811.001.00----------1.00-------------------------------------------------------
...............................................................................................................................................................AGATTTAGGAATATTGCAT........................................................................191.000.00------------1.00-----------------------------------------------------
..................AGGATTCCTGTTGCTTTACCC...................................................................................................................................................................................................................2111.001.00------------1.00-----------------------------------------------------
.............................................................................................................TAACTCTGCATTCTGGCTTC.........................................................................................................................2011.001.00-------------------------------------1.00----------------------------
.........................................................................................................................CTGGCTTCTGTATGTAGTA..............................................................................................................1911.001.00--------------1.00---------------------------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTGTTG.....................................251.000.001.00-----------------------------------------------------------------
..............................................................................................................................................................................................TGTGTAGATGCTTTTTTCTTTGTCG...................................251.000.00--1.00---------------------------------------------------------------
....................................................................................TCTTCTCCCCACCTTATTCC..................................................................................................................................................2011.001.00---------1.00--------------------------------------------------------
.................CAGGATTCCTGTTGCTTTACC....................................................................................................................................................................................................................2111.001.00---1.00--------------------------------------------------------------
.................................................................................................................................................................................TTAATTTTTTAAGTGTGTAGATGCTTTTTTCT.........................................3211.001.00--1.00---------------------------------------------------------------
.............................................................................................................TAACTCTGCATTCTGGCTTCTGTA.....................................................................................................................2411.001.00------1.00-----------------------------------------------------------
.................................................................................................................................................................................................................................AACAGAAGTGTACCTTTTA......1911.001.00---1.00--------------------------------------------------------------
................CCAGGATTCCTGTTGCTTTA......................................................................................................................................................................................................................2011.001.00-------------------------------------------1.00----------------------
...............................................................................................................................................................................................GTGTAGATGCTTTTTTCTTTGTTGTTC................................271.000.001.00-----------------------------------------------------------------
..............................................................................................................................................................................................TGTGTAGATGCTTTTTTCTTTGTTGTTT................................2811.001.001.00-----------------------------------------------------------------
........................................................................................................................................................TTAAAATAGATTTAGGAATATTGAATTAATTTTTT...............................................................3511.001.00-----------1.00------------------------------------------------------
...............................................................................................................................................................AGATTTAGGAATATTGAATTAATT...................................................................2411.001.00-------------------1.00----------------------------------------------
.................................................................................................TTATTCCATTCTTAACTCTGCATTCTGGC............................................................................................................................2911.001.00-------------------1.00----------------------------------------------
..............................................................................................................................................................................................TGTGTAGATGCTTTTTTCTTTGTTGT..................................2611.001.001.00-----------------------------------------------------------------
...........ATCTCCCAGGATTCCTGTTGCTTACCC....................................................................................................................................................................................................................271.000.001.00-----------------------------------------------------------------
..................................................................................................................................................................................................................TGTTGTTTAAATATAATTAT....................201.000.00--------------------------1.00---------------------------------------
...............................................................................................................................................................AGATTTAGGAATATTGAATT.......................................................................2011.001.00--------------------------------------------------------------1.00---
......CTTGTATCTCCCAGGATTCC................................................................................................................................................................................................................................2011.001.00--------------------------------------------------1.00---------------
..................................................................................................................................................AATGAGTTAAAATAGATTTAGGAATATTG...........................................................................2911.001.00----------------------------------------------------1.00-------------
.............................................................................................................................................................................................GTGTGTAGATGCTTTTTTC..........................................1911.001.00----------------------------1.00-------------------------------------
...................................................................................................................................................ATGAGTTAAAATAGATTTAGGAATATTGAAT........................................................................3111.001.00---------------------------------1.00--------------------------------
...................................................................................................................................................ATGAGTTAAAATAGATTTAGGAATAT.............................................................................2611.001.00-----1.00------------------------------------------------------------
............................................................................................................................................................................................AGTGTGTAGATGCTTTTTTCTTCGTT....................................261.000.001.00-----------------------------------------------------------------
.....................................................................................................................................................................................TTTTTTAAGTGTGTAGATGCTTTTTCC..........................................271.000.00--1.00---------------------------------------------------------------
.................................................................TTTTTCTTCGTGGTCGCCA......................................................................................................................................................................191.000.00--------------------------------------1.00---------------------------
.............................................................................................................TAACTCTGCATTCTGGCTTCTGAT.....................................................................................................................241.000.00---1.00--------------------------------------------------------------
................................................................................................................................CTGTATGTAGTATTTTAAAAT.....................................................................................................2111.001.00-----------1.00------------------------------------------------------
.........................................................................................TCCCCACCTTATTCCATTCTTAACTCTG.....................................................................................................................................2811.001.00----------------------1.00-------------------------------------------
..............................................................................................................AACTCTGCATTCTGGCTTC.........................................................................................................................1911.001.00------1.00-----------------------------------------------------------
.....................................................................................................................................................................................TTTTTTAAGTGTGTAGATGCTTTTTTCTTTGTC....................................331.000.001.00-----------------------------------------------------------------
...............................................................................CCCCTTCTTCTCCCCACCTTATTCCATTCT.............................................................................................................................................3011.001.00-------------------------1.00----------------------------------------
...................................................................................................................................................................................................................................CAGAAGTGTACCTTTTTAG....191.000.00-----------1.00------------------------------------------------------
................................................................................................CTTATTCCATTCTTAACTCTG.....................................................................................................................................2111.001.00-------------------------------1.00----------------------------------
........................................................................................................................TCTGGCTTCTGTATGTAGTA..............................................................................................................2011.001.00-----------------1.00------------------------------------------------
...............CCCAGGATTCCTGTTGCTTT.......................................................................................................................................................................................................................2011.001.00---------------------------------------1.00--------------------------
........................................................................................................ATTCTTAACTCTGCATTCTGGCT...........................................................................................................................2311.001.00---------------------------------------------------1.00--------------
.................................................AGTAATTGTCTAAGTG.........................................................................................................................................................................................1620.500.50--------------0.50---------------------------------------------------
...............................................................................CCCCTTCTTCTCCCCACC.........................................................................................................................................................1830.330.33------------------------0.33-----------------------------------------
..........................................................................................................................................................AAAATAGATTTAGGAATAT.............................................................................1940.250.25---0.25--------------------------------------------------------------
......CTTGTATCTCCCAGGA....................................................................................................................................................................................................................................1650.200.20---------------0.20--------------------------------------------------
.........................................................................................................................................................................................................TTTTTTCTTTGTTGTTTA...............................1860.170.170.17-----------------------------------------------------------------
............................................................................................CCACCTTATTCCATT...............................................................................................................................................1570.140.14-------0.14----------------------------------------------------------

Antisense strand
TGATTTCTTGTATCTCCCAGGATTCCTGTTGCTTTACCCACAACAGACAAGTAATTGTCTAAGTGTTTTTCTTCGTGGTCCCCTTCTTCTCCCCACCTTATTCCATTCTTAACTCTGCATTCTGGCTTCTGTATGTAGTATTTTAAAATGAGTTAAAATAGATTTAGGAATATTGAATTAATTTTTTAAGTGTGTAGATGCTTTTTTCTTTGTTGTTTAAATATAAACAGAAGTGTACCTTTTATAATAA
.......................................................................................................................((((((..(((((......((((....)))).......))))).)))))).................................................................................
.......................................................................................................................120.................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040042(GSM532927)
G428N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
........................................................................................................................................................................AATATTGAATTAATTTTTTCTC............................................................ 221.000.00----------------------1.00-------------------------------------------
.................................................................................CCTTCTTCTCCCCACCTT....................................................................................................................................................... 181.000.00--------------------------------------------------------1.00---------
............................................................................................................................................................................................................TTTCTTTGTTGTTTAAGT............................ 181.000.00-----------------------------------1.00------------------------------
................................................................................................................................................................................................................................AAGGTACACTTCTGTTT......... 1720.500.50-----------------------------------------------------------------0.50