ID: uc001bru.2_intron_5_0_chr1_29586557_f.3p
GENE: (6)
chr1:29586922-29587171+


(1)
B-CELL
(3)
BRAIN
(1)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(1)
LIVER
(1)
OTHER
(25)
SKIN
(1)
TESTES

Sense strand
GGGTCAGCCTTTGGAGCCAGGTGCCCCTTAGGGCCCGGGATTTAGTGGGGGTAGGAGAGCGGGTCTGGTTGAGGGCTTGGTAGCAGCGTGAGAGGCCCTAGGAGGACGGAGAGGGATTTGGGTGTGGTGGAACTCAGAGTTGGGTGCTGGGGTCTCACAGCAGCATCGGTCCGCCTCGCCTCTCCCCCATCTCCTCGCAGAGCCCCCAACTCCCATCGCGCCCCCACAGCTGCTGCGTGCTGGCCCCACC
...............................................................................................((((............)))).(((((((........)))))))................................................................................................................
...........................................................................................92...............................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................GGTGTGGTGGAACTCTG.................................................................................................................1746.000.0012.006.002.004.003.003.002.00---1.00-2.00----1.001.00--1.00--1.001.00--1.00--1.00---1.001.00--1.00-1.00--------
......................................................................................................................TGGGTGTGGTGGAACTCTG.................................................................................................................1911.000.001.001.003.001.00------1.00---------1.00-1.00-----------1.00--1.00------------
.......................................................................................................................GGGTGTGGTGGAACTCTG.................................................................................................................186.000.00----1.00---------2.00----1.00-------1.00----1.00-----------------
..............AGCCAGGTGCCCCTTCCA..........................................................................................................................................................................................................................183.000.00---------------2.00--------------1.00-------------------
.......................................................................................................GGACGGAGAGGGATTAT..................................................................................................................................171.000.00----------------------------------------1.00---------
...............................................................................................................AGGGATTTGGGTGTGTAT.........................................................................................................................181.000.00--------------------------1.00-----------------------
.....................................................................................................................TTGGGTGTGGTGGAACTCTG.................................................................................................................201.000.00--------1.00-----------------------------------------
...................................................................................................AGGAGGACGGAGAGGAGCA....................................................................................................................................191.000.00-----------------------------1.00--------------------
............................................................................................................................TGGTGGAACTCAGAGTTGG...........................................................................................................1921.001.00------------------------------------------0.500.50------
...............................................GGGGTAGGAGAGCGGGTTGGG......................................................................................................................................................................................211.000.00-----------1.00--------------------------------------
................................................................................................CCTAGGAGGACGGAGAGGCCGG....................................................................................................................................221.000.00-------------1.00------------------------------------
...............................................................TCTGGTTGAGGGCTTTCTG........................................................................................................................................................................191.000.00--------------------------------------1.00-----------
..................................................................................................TAGGAGGACGGAGAGATT......................................................................................................................................181.000.00---------1.00----------------------------------------
..........................................TAGTGGGGGTAGGAGGGAA.............................................................................................................................................................................................191.000.00-----------------------1.00--------------------------
............................................................................................................................TGGTGGAACTCAGAGT..............................................................................................................1660.330.33---------------------------------------------0.33----
...........................................................................................................................................................................................................................GCCCCCACAGCTGCTGC..............1740.250.25----------------------------------------------0.25---
.............................................TGGGGGTAGGAGAGCG.............................................................................................................................................................................................1640.250.25-----------------------------------------------0.25--
......................................................................................................................................CAGAGTTGGGTGCTGGG...................................................................................................1740.250.25--------------------------------------------0.25-----
...............................................................................................................................TGGAACTCAGAGTTGG...........................................................................................................1660.170.17-----------------0.17--------------------------------

Antisense strand
GGGTCAGCCTTTGGAGCCAGGTGCCCCTTAGGGCCCGGGATTTAGTGGGGGTAGGAGAGCGGGTCTGGTTGAGGGCTTGGTAGCAGCGTGAGAGGCCCTAGGAGGACGGAGAGGGATTTGGGTGTGGTGGAACTCAGAGTTGGGTGCTGGGGTCTCACAGCAGCATCGGTCCGCCTCGCCTCTCCCCCATCTCCTCGCAGAGCCCCCAACTCCCATCGCGCCCCCACAGCTGCTGCGTGCTGGCCCCACC
...............................................................................................((((............)))).(((((((........)))))))................................................................................................................
...........................................................................................92...............................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
.............................................................................TGGTAGCAGCGTGAGTC............................................................................................................................................................ 173.000.00-------2.00-------------------------1.00----------------
....................................................................................................................................................................................TCTCCCCCATCTCCTTGT.................................................... 181.000.00-----------1.00--------------------------------------
....................................................................................................................................................GGGGTCTCACAGCAGCATTTG................................................................................. 211.000.00-------------1.00------------------------------------
.......................................................................................................................................................................................................GAGCCCCCAACTCCCAGC................................. 181.000.00--------1.00-----------------------------------------
.......................................................................................................................................AGAGTTGGGTGCTGGGGCG................................................................................................ 191.000.00---------1.00----------------------------------------
........................................................................................................................................................TCTCACAGCAGCATCGGG................................................................................ 181.000.00----------------1.00---------------------------------
........................................................................................................................................................TCTCACAGCAGCATCGGGG............................................................................... 191.000.00----------------1.00---------------------------------
...............................................GGGGTAGGAGAGCGGTCC......................................................................................................................................................................................... 180.430.00------0.14-----------------------------------0.14-----0.14-
...............................................CCGCTCTCCTACCCC............................................................................................................................................................................................ 1570.140.14-------------------------------------------------0.14
......................................................................................................................................................................................CGAGGAGATGGGGGA..................................................... 1570.140.14--------------------------------------------0.14-----