uc001bqh.2_intron_0_0_chr1_28879650

AAGCCCCACCCCGGTGCGCGGGTATGGCGGCCAGCCTGTGGATGGGCGACGTGAGTGAGGGCAGCCGTCCGGGGTCTGAAGACAAGGAAGCATCTCGGTTTCGCGAGAGAGGAAGGATCTGAGTGGGAGGGGACTTGGGATCCCAGAAAGGGGAGACGTGTGACGGGGGTTCTTTTTGGTGACACAGAAGCGGGTTCCAGCATCTAAGTGAAGAGGCTGAGTCCGTGAGGCTAGGGGTCCTGGGGCCCCA
...................................................................(((...(((....)))..))).....(((.(((.((((............((..(((........)))..)).((((......))))..)))).))).)))..................................................................................
..................................................................67...................................................................................................168................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

TAX577740(Rovira)
total RNA. (breast)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR553576(SRX182782)
source: Testis. (testes)

SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)

TAX577580(Rovira)
total RNA. (breast)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037937(GSM510475)
293cand2. (cell line)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

SRR040015(GSM532900)
G623T. (cervix)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189787

SRR029129(GSM416758)
SW480. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR189782

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

TAX577739(Rovira)
total RNA. (breast)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR038854(GSM458537)
MM653. (cell line)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR553575(SRX182781)
source: Kidney. (Kidney)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR189784

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR037936(GSM510474)
293cand1. (cell line)

SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)

SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)

SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)

SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR040008(GSM532893)
G727N. (cervix)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)

SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)

TAX577741(Rovira)
total RNA. (breast)

SRR040025(GSM532910)
G613T. (cervix)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577742(Rovira)
total RNA. (breast)

SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)

SRR029126(GSM416755)
143B. (cell line)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577579(Rovira)
total RNA. (breast)

SRR015365(GSM380330)
Memory B cells (MM139). (B cell)

SRR038857(GSM458540)
D20. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR038853(GSM458536)
MELB. (cell line)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

TAX577453(Rovira)
total RNA. (breast)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)

SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)

SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)

SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)

.......................................................................GGGTCTGAAGACAAGGAAG................................................................................................................................................................

10.00

8.00

1.00

...........................................GGGCGACGTGAGTGAGGG.............................................................................................................................................................................................

9.00

1.00

2.00

1.00

2.00

1.00

.........................................ATGGGCGACGTGAGTGAGGG.............................................................................................................................................................................................

8.00

4.00

1.00

.........................................................................GTCTGAAGACAAGGAAGCA..............................................................................................................................................................

5.00

.....................................................................CGGGGTCTGAAGACAAGGAAG................................................................................................................................................................

5.00

3.00

1.00

..........................GCGGCCAGCCTGTGGATGGG............................................................................................................................................................................................................

5.00

2.00

1.00

..........................................................................TCTGAAGACAAGGAAGCA..............................................................................................................................................................

4.00

3.00

1.00

.................................................................................ACAAGGAAGCATCTCGGTT......................................................................................................................................................

4.00

............................................................................................................................................................................................................TAAGTGAAGAGGCTGAGTCC..........................

3.00

..............................................................................................................................................CCAGAAAGGGGAGACGTGTGAC......................................................................................

3.00

2.00

1.00

............................................GGCGACGTGAGTGAGGGCA...........................................................................................................................................................................................

3.00

..........................................................................TCTGAAGACAAGGAAGCATCT...........................................................................................................................................................

3.00

...............................................................................................................................................CAGAAAGGGGAGACGTG..........................................................................................

3.00

......................................................................GGGGTCTGAAGACAAGGA..................................................................................................................................................................

3.00

2.00

1.00

.........................................................AGGGCAGCCGTCCGGGGT...............................................................................................................................................................................

3.00

1.00

2.00

0.00

2.00

......................................................................GGGGTCTGAAGACAAGGAAGCA..............................................................................................................................................................

2.00

1.00

.........................................ATGGGCGACGTGAGTGAGGGC............................................................................................................................................................................................

2.00

1.00

............................................GGCGACGTGAGTGAGGGC............................................................................................................................................................................................

2.00

1.00

...........................................GGGCGACGTGAGTGAGGGCAGCCG.......................................................................................................................................................................................

2.00

.....................................GTGGATGGGCGACGTGAGTG.................................................................................................................................................................................................

2.00

...........................................GGGCGACGTGAGTGAGG..............................................................................................................................................................................................

2.00

1.00

.............................GCCAGCCTGTGGATGGGCGACGTG.....................................................................................................................................................................................................

2.00

1.00

................................................................................................................................................AGAAAGGGGAGACGTGTGA.......................................................................................

2.00

................................AGCCTGTGGATGGGCGAC........................................................................................................................................................................................................

2.00

1.00

...........................................GGGCGACGTGAGTGAGGGCAGC.........................................................................................................................................................................................

2.00

1.00

..............................................................................................................................................................................TTTGGTGACACAGAAGCG..........................................................

2.00

................................................................................................................................................................................TGGTGACACAGAAGCGGGTTC.....................................................

2.00

.........................................................................GTCTGAAGACAAGGAAGCATCTC..........................................................................................................................................................

2.00

...............................CAGCCTGTGGATGGGCGA.........................................................................................................................................................................................................

2.00

1.00

...........................CGGCCAGCCTGTGGATGGGCG..........................................................................................................................................................................................................

2.00

1.00

...................................CTGTGGATGGGCGACGTG.....................................................................................................................................................................................................

2.00

1.00

......................................................................................................GCGAGAGAGGAAGGATCT..................................................................................................................................

2.00

.....................................................................CGGGGTCTGAAGACAAGGAAGC...............................................................................................................................................................

2.00

..............................................................................AAGACAAGGAAGCATCTCGG........................................................................................................................................................

2.00

......................................................................GGGGTCTGAAGACAAGGAAGCAT.............................................................................................................................................................

2.00

1.00

.........................GGCGGCCAGCCTGTGGATGGG............................................................................................................................................................................................................

2.00

1.00

.........................................ATGGGCGACGTGAGTGAG...............................................................................................................................................................................................

1.00

...........................................GGGCGACGTGAGTGAGGGCAGCC........................................................................................................................................................................................

1.00

........................TGGCGGCCAGCCTGTGGATGGGCGACG.......................................................................................................................................................................................................

1.00

......................................................................GGGGTCTGAAGACAAGAAA.................................................................................................................................................................

1.00

0.00

1.00

.....................................GTGGATGGGCGACGTGAG...................................................................................................................................................................................................

1.00

....................................TGTGGATGGGCGACGTTCCG..................................................................................................................................................................................................

1.00

0.00

1.00

..................................................................GTCCGGGGTCTGAAGACAAGGAAGCATCTCGGT.......................................................................................................................................................

1.00

.......................................................................................................CGAGAGAGGAAGGATCTGAGG..............................................................................................................................

1.00

0.00

1.00

......................................TGGATGGGCGACGTGAGTGAG...............................................................................................................................................................................................

1.00

..................................CCTGTGGATGGGCGACGTGAG...................................................................................................................................................................................................

1.00

..........................GCGGCCAGCCTGTGGATGGGCGACG.......................................................................................................................................................................................................

1.00

...............................CAGCCTGTGGATGGGCGACGTG.....................................................................................................................................................................................................

1.00

............................................................................TGAAGACAAGGAAGCCCCC...........................................................................................................................................................

1.00

0.00

1.00

...........................CGGCCAGCCTGTGGATGG.............................................................................................................................................................................................................

1.00

...................................CTGTGGATGGGCGACGTGAG...................................................................................................................................................................................................

1.00

..........................GCGGCCAGCCTGTGGATGGGCGACGT......................................................................................................................................................................................................

1.00

..................................................GTGAGTGAGGGCAGCCGTC.....................................................................................................................................................................................

1.00

....................................TGTGGATGGGCGACGAC.....................................................................................................................................................................................................

1.00

0.00

1.00

.............................................................................................................................................CCCAGAAAGGGGAGACGTGTGACGGG...................................................................................

1.00

......................................................................................................GCGAGAGAGGAAGGATCTGA................................................................................................................................

1.00

......................................TGGATGGGCGACGTGAGTGAGGGCAG..........................................................................................................................................................................................

1.00

...................................CTGTGGATGGGCGACGTGAGTG.................................................................................................................................................................................................

1.00

.......................................................................................AAGCATCTCGGTTTCGCGAGAGATG..........................................................................................................................................

1.00

0.00

1.00

.....................................GTGGATGGGCGACGTGA....................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................GGGTTCCAGCATCTAAGTGAAGA....................................

1.00

...............................................................GCCGTCCGGGGTCTGAAGA........................................................................................................................................................................

1.00

.......................................GGATGGGCGACGTGAGTGAG...............................................................................................................................................................................................

1.00

...............................................................GCCGTCCGGGGTCTGAAGACAAG....................................................................................................................................................................

1.00

.........................................................AGGGCAGCCGTCCGGGGTCTGAA..........................................................................................................................................................................

1.00

...................................CTGTGGATGGGCGACGTGAGTGAG...............................................................................................................................................................................................

1.00

...................................................................................................................................................................................TGACACAGAAGCGGGTTCATTT.................................................

1.00

0.00

1.00

..............................................................................................................................................CCAGAAAGGGGAGACGTG..........................................................................................

1.00

......................................TGGATGGGCGACGTGAGTGAGGG.............................................................................................................................................................................................

1.00

...............................CAGCCTGTGGATGGGCGAC........................................................................................................................................................................................................

1.00

.....................................GTGGATGGGCGACGTGAAAAT................................................................................................................................................................................................

1.00

....................................................................................................................................................AGGGGAGACGTGTGAGCTT...................................................................................

1.00

0.00

1.00

.............................GCCAGCCTGTGGATGGGCGAC........................................................................................................................................................................................................

1.00

...........................................................................................................................................................................CTTTTTGGTGACACAGAAGCGGG........................................................

1.00

...........................CGGCCAGCCTGTGGATGGGCGACGTGA....................................................................................................................................................................................................

1.00

.........................................ATGGGCGACGTGAGTGA................................................................................................................................................................................................

1.00

...........................................GGGCGACGTGAGTGAGGGC............................................................................................................................................................................................

1.00

................................................................CCGTCCGGGGTCTGAAGA........................................................................................................................................................................

1.00

.......................................................................GGGTCTGAAGACAAGGAAGCAT.............................................................................................................................................................

1.00

..................................CCTGTGGATGGGCGACGT......................................................................................................................................................................................................

1.00

.........................................ATGGGCGACGTGAGTGAT...............................................................................................................................................................................................

1.00

.......................ATGGCGGCCAGCCTGTGGATGGG............................................................................................................................................................................................................

1.00

............................................................................................TCTCGGTTTCGCGAGAGAGGAAGGA.....................................................................................................................................

1.00

............................................................GCAGCCGTCCGGGGTCTGAAGACAAGGAAGCA..............................................................................................................................................................

1.00

..............................................................................AAGACAAGGAAGCATCTCGGGT......................................................................................................................................................

1.00

2.00

1.00

.................................................................CGTCCGGGGTCTGAAGACAA.....................................................................................................................................................................

1.00

.....................................GTGGATGGGCGACGTGAGTATT...............................................................................................................................................................................................

1.00

0.00

1.00

.....................................GTGGATGGGCGACGTGATTC.................................................................................................................................................................................................

1.00

................................................................................................................................................AGAAAGGGGAGACGTGTGAC......................................................................................

1.00

.........................................ATGGGCGACGTGAGTGAGGGCAG..........................................................................................................................................................................................

1.00

.......................................................................................................CGAGAGAGGAAGGATCTG.................................................................................................................................

1.00

..................CGGGTATGGCGGCCAGCCTGT...................................................................................................................................................................................................................

1.00

..............................................................AGCCGTCCGGGGTCTGAAGAC.......................................................................................................................................................................

1.00

..........................................................GGGCAGCCGTCCGGGGTCTGA...........................................................................................................................................................................

1.00

.....................................GTGGATGGGCGACGTGAATT.................................................................................................................................................................................................

1.00

..........................GCGGCCAGCCTGTGGATGGGCGACGTG.....................................................................................................................................................................................................

1.00

...............................................................GCCGTCCGGGGTCTGAAGACAAGGAA.................................................................................................................................................................

1.00

............GGTGCGCGGGTATGGATGG...........................................................................................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

....................................................................CCGGGGTCTGAAGACAA.....................................................................................................................................................................

1.00

.....................................................................................................CGCGAGAGAGGAAGGATCTGA................................................................................................................................

1.00

..............................CCAGCCTGTGGATGGGCGAC........................................................................................................................................................................................................

1.00

.....................................GTGGATGGGCGACGTGAGTGAGGG.............................................................................................................................................................................................

1.00

............................................GGCGACGTGAGTGAGGG.............................................................................................................................................................................................

1.00

.................................GCCTGTGGATGGGCGACCTGG....................................................................................................................................................................................................

1.00

0.00

1.00

..................................................................GTCCGGGGTCTGAAGACAAGGA..................................................................................................................................................................

1.00

......................................................................GGGGTCTGAAGACAAGGAAGCATC............................................................................................................................................................

1.00

........................................................................GGTCTGAAGACAAGGAA.................................................................................................................................................................

1.00

.....................................GTGGATGGGCGACGTGAGTGAG...............................................................................................................................................................................................

1.00

......................................................................GGGGTCTGAAGACAAGGAAGC...............................................................................................................................................................

1.00

........................................................................................................GAGAGAGGAAGGATCTGAG...............................................................................................................................

1.00

..............................................................................AAGACAAGGAAGCATCTCGGTT......................................................................................................................................................

1.00

...........................CGGCCAGCCTGTGGATGGGCGACG.......................................................................................................................................................................................................

1.00

...........................................................................................................................................................................................AAGCGGGTTCCAGCATCTAAG..........................................

1.00

........................................................................GGTCTGAAGACAAGGAAG................................................................................................................................................................

1.00

.......................ATGGCGGCCAGCCTGTGGAGTG.............................................................................................................................................................................................................

1.00

0.00

1.00

..............................CCAGCCTGTGGATGGGC...........................................................................................................................................................................................................

0.67

.............................GCCAGCCTGTGGATGGGC...........................................................................................................................................................................................................

0.50

............................GGCCAGCCTGTGGATGGG............................................................................................................................................................................................................

0.50

..........................GCGGCCAGCCTGTGGATG..............................................................................................................................................................................................................

0.50

..................................................GTGAGTGAGGGCAGCCGT......................................................................................................................................................................................

0.50

...........................................................................................................AGAGGAAGGATCTGAGTG.............................................................................................................................

0.33

.............................GCCAGCCTGTGGATGGG............................................................................................................................................................................................................

0.33

................................................................................................................AAGGATCTGAGTGGGA..........................................................................................................................

0.25