ID: uc001bpi.1_intron_13_0_chr1_28365417_r.3p
GENE: (4)
chr1:28365367-28365616-


(3)
BREAST 		(2)
CELL-LINE 		(12)
CERVIX 		(1)
LIVER 		(2)
OTHER 		(2)
SKIN

Sense strand
TTTTAACTGCCTCTGGAAGTCTATAAACACATGTATAAACAAAAAAGTGAGATATTTTCTACCACATAGTCTTTCTATCTGGTGTCCAAGCTGTATTCTGTTAATTAGTTTGAAAGACTATACAGTGAGATGTGCAGTTTTCCCATTCCATTTTCGAAATGTTCTAACTTTTTAACCTGGTGATATTATCTTTCTTTCAGTTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCA
..............................................................................................................................((((.(((.(((......))).))))))).....................((((.((.........))..))))..................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR189782SRR189785SRR040039(GSM532924)
G531T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)
...................................................................................................................................GTGCAGTTTTCCCATGAAT....................................................................................................1914.000.004.00-3.001.003.00--1.00---1.00----1.00-----
...................................................................................................................................GTGCAGTTTTCCCATGTAT....................................................................................................196.000.002.00--1.00-1.00-2.00--------------
...................................................................................................................................GTGCAGTTTTCCCATGTTT....................................................................................................196.000.002.00-2.001.00----1.00-------------
...................................................................................................................................GTGCAGTTTTCCCATGAGT....................................................................................................195.000.001.001.001.00--1.00-------1.00--------
...................................................................................................................................GTGCAGTTTTCCCATGACT....................................................................................................194.000.001.00--1.00----1.00--1.00----------
...................................................................................................................................GTGCAGTTTTCCCATTAAT....................................................................................................194.000.00-2.00-1.00-1.00----------------
...................................................................................................................................GTGCAGTTTTCCCATTAGT....................................................................................................194.000.00-4.00--------------------
...................................................................................................................................................................................................................ACCGATTACATCCCTCGCTCATCCAAT............2713.003.00------3.00---------------
...................................................................................................................................GTGCAGTTTTCCCATGCAT....................................................................................................193.000.003.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATGTGT....................................................................................................192.000.002.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATTACTC...................................................................................................202.000.001.00-1.00-------------------
...................................................................................................................................GTGCAGTTTTCCCATGAA.....................................................................................................182.000.00-1.00---1.00----------------
...................................................................................................................................GTGCAGTTTTCCCATTAATG...................................................................................................201.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATGGGT....................................................................................................191.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATTCTT....................................................................................................191.000.001.00---------------------
.........................................................................................................................ACAGTGAGATGTGCAGAGA..............................................................................................................191.000.00-------------------1.00--
...................................................................................................................................GTGCAGTTTTCCCATGCAC....................................................................................................191.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATTCATCC..................................................................................................211.000.00--1.00-------------------
...................................................................................................................................GTGCAGTTTTCCCATTAGTG...................................................................................................201.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATGTTG....................................................................................................191.000.00---1.00------------------
...................................................................................................................................GTGCAGTTTTCCCATTAATT...................................................................................................201.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATTTATA...................................................................................................201.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATGCAA....................................................................................................191.000.00----1.00-----------------
...................................................................................................................................GTGCAGTTTTCCCATGTCT....................................................................................................191.000.00--1.00-------------------
..........................................................................................................................................................CGAAATGTTCTAACTTTTTAAC..........................................................................2211.001.00--------------------1.00-
...................................................................................................................................GTGCAGTTTTCCCATGTAG....................................................................................................191.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATTAATC...................................................................................................201.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATTTGT....................................................................................................191.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATCAAT....................................................................................................191.000.001.00---------------------
.......................................................................................................................................................................................................................................ATCCAATGATTATACCTC.1811.001.00------------------1.00---
...................................................................................................................................GTGCAGTTTTCCCATGGAT....................................................................................................191.000.00------------1.00---------
...................................................................................................................................GTGCAGTTTTCCCATTCTTC...................................................................................................201.000.001.00---------------------
......................................................................................................................................................................................................AGTTATGACATGCACTACA.................................191.000.00---------------1.00------
...................................................................................................................................GTGCAGTTTTCCCATTAA.....................................................................................................181.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATAACT....................................................................................................191.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATGAAG....................................................................................................191.000.00--1.00-------------------
......................................................................................................................................................................................ATATTATCTTTCTTTAATG.................................................191.000.00----------1.00-----------
...................................................................................................................................GTGCAGTTTTCCCATTGTT....................................................................................................191.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATGCAG....................................................................................................191.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATGAAA....................................................................................................191.000.001.00---------------------
....................................................................................................................................TGCAGTTTTCCCATTAAT....................................................................................................181.000.00-1.00--------------------
..........................................................CTACCACATAGTCTTTCTATCTG.........................................................................................................................................................................2311.001.00--------------1.00-------
...................................................................................................................................GTGCAGTTTTCCCATGTAA....................................................................................................191.000.00--------1.00-------------
...................................................................................................................................GTGCAGTTTTCCCATTGGTC...................................................................................................201.000.00---1.00------------------
...................................................................................................................................GTGCAGTTTTCCCATTGTTC...................................................................................................201.000.001.00---------------------
...................................................................................................................................GTGCAGTTTTCCCATTCAT....................................................................................................191.000.00-1.00--------------------
...................................................................................................................................GTGCAGTTTTCCCATGACA....................................................................................................191.000.00---------------------1.00

Antisense strand
TTTTAACTGCCTCTGGAAGTCTATAAACACATGTATAAACAAAAAAGTGAGATATTTTCTACCACATAGTCTTTCTATCTGGTGTCCAAGCTGTATTCTGTTAATTAGTTTGAAAGACTATACAGTGAGATGTGCAGTTTTCCCATTCCATTTTCGAAATGTTCTAACTTTTTAACCTGGTGATATTATCTTTCTTTCAGTTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCA
..............................................................................................................................((((.(((.(((......))).))))))).....................((((.((.........))..))))..................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR189782SRR189785SRR040039(GSM532924)
G531T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)
..........................................................................................................................................................................TTTAACCTGGTGATATCAG............................................................. 191.000.00---------1.00------------
.........................................................................................................................................................................TTTTAACCTGGTGATATG............................................................... 181.000.00---------1.00------------
.............................................................................................................................................................................AACCTGGTGATATTATTA........................................................... 181.000.00-----------------1.00----
...........................................................................................................................AGTGAGATGTGCAGTTTTG............................................................................................................ 191.000.00----------1.00-----------