uc001bll.3_intron_0_0_chr1_26496675

TTCGACCCCGACCTGCCAGGGGGCGGTCTGCACCGCTGTCTGGCCTGCGCGTGAGTCCCGGACGAGCCCGGCCTGGGGCGGAGGAGGGTCCGCGGTACCGGCCGGGAGATGTGAAGTTGAAGCCCCAGGCAGCGCAGAGTCTTCTCTCTTGGGACCCGTGGGTCCGCCCGCCTCCCGTTTCTCAGACCCGGATCCTGGCGTCAGGGACAAGCTAGGGCTAGGGAGATAGGTGCACTTGGGAGACTATCACCTCCTCACTCTCCTTCTCACTTCCATTCCTACAGGAGGTACTTCATCGATTCCACCAACCTGAAGACCCACTTCCGATCCAAAG
..................................................((..(((((.((((...((((.((((((((((((.((..((((((..((((..((((((...((..(((..(((...)))....)))..)).))))))))))...))))))..)).....))))).))..)))))..)))).......)))).)))))..))..........................................................................................................................
..................................................51...................................................................................................................................................................216....................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR040036(GSM532921)
G243N. (cervix)

SRR040040(GSM532925)
G612N. (cervix)

SRR040038(GSM532923)
G531N. (cervix)

SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)

SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)

SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)

SRR040037(GSM532922)
G243T. (cervix)

SRR040041(GSM532926)
G612T. (cervix)

SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR040034(GSM532919)
G001N. (cervix)

SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)

SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)

SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)

SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)

SRR040039(GSM532924)
G531T. (cervix)

SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)

SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR040032(GSM532917)
G603N. (cervix)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR040035(GSM532920)
G001T. (cervix)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

SRR040020(GSM532905)
G699N_2. (cervix)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR040014(GSM532899)
G623N. (cervix)

SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR189782

SRR040007(GSM532892)
G601T. (cervix)

SRR037938(GSM510476)
293Red. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR040016(GSM532901)
G645N. (cervix)

SRR015358(GSM380323)
Nàøve B Cell (Naive39). (B cell)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR038861(GSM458544)
MM466. (cell line)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR038860(GSM458543)
MM426. (cell line)

GSM532887(GSM532887)
G761N. (cervix)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR189784

SRR040018(GSM532903)
G701N. (cervix)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR040029(GSM532914)
G026T. (cervix)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR040008(GSM532893)
G727N. (cervix)

SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

TAX577741(Rovira)
total RNA. (breast)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM339994(GSM339994)
hues6. (cell line)

SRR040022(GSM532907)
G575N. (cervix)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR553576(SRX182782)
source: Testis. (testes)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189786

SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR040024(GSM532909)
G613N. (cervix)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR015361(GSM380326)
Memory B cells (MM55). (B cell)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR040015(GSM532900)
G623T. (cervix)

TAX577588(Rovira)
total RNA. (breast)

TAX577579(Rovira)
total RNA. (breast)

GSM532885(GSM532885)
G850N. (cervix)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

GSM532889(GSM532889)
G576N. (cervix)

SRR037936(GSM510474)
293cand1. (cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)

SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)

SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)

SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

GSM532871(GSM532871)
G652N. (cervix)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

GSM532884(GSM532884)
G871T. (cervix)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR343335

SRR038857(GSM458540)
D20. (cell line)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

GSM532886(GSM532886)
G850T. (cervix)

DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577745(Rovira)
total RNA. (breast)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)

SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

......................................................GTCCCGGACGAGCCCCCA......................................................................................................................................................................................................................................................................

494.50

7.00

75.00

69.00

54.00

33.00

25.50

17.50

22.50

20.50

9.00

10.50

15.50

8.50

5.50

4.50

6.50

5.50

3.50

5.00

3.00

4.00

1.50

2.00

2.50

3.00

2.50

2.00

2.50

1.50

1.00

0.50

1.00

2.00

1.00

2.00

0.50

1.00

1.50

1.00

0.50

1.00

1.50

0.50

1.00

0.50

1.00

0.50

1.00

0.50

1.00

0.50

1.00

0.50

.....................................................AGTCCCGGACGAGCCCCCA......................................................................................................................................................................................................................................................................

32.00

1.00

2.50

6.00

4.50

2.50

4.50

4.00

0.50

1.50

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCCC.......................................................................................................................................................................................................................................................................

14.00

7.00

2.50

0.50

1.50

4.00

1.50

0.50

1.00

0.50

.......................................................TCCCGGACGAGCCCGCA......................................................................................................................................................................................................................................................................

10.00

1.00

1.50

1.25

0.25

1.00

0.25

0.50

0.25

0.50

0.25

......................................................GTCCCGGACGAGCCC.........................................................................................................................................................................................................................................................................

7.00

0.50

1.50

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCCCC......................................................................................................................................................................................................................................................................

6.50

7.00

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCTCA......................................................................................................................................................................................................................................................................

5.50

7.00

0.50

2.50

1.50

0.50

......................................................GTCCCGGACGAGCCCACA......................................................................................................................................................................................................................................................................

3.50

7.00

1.00

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCCTA......................................................................................................................................................................................................................................................................

3.50

7.00

0.50

1.00

0.50

.....................................................AGTCCCGGACGAGCCCCC.......................................................................................................................................................................................................................................................................

3.00

1.00

0.50

......................................................GTCCCGGACGAGCCCCCG......................................................................................................................................................................................................................................................................

2.50

7.00

0.50

......................................................GTCCCGGACGAGCCCCCT......................................................................................................................................................................................................................................................................

2.50

7.00

1.00

0.50

......................................................GTCCCGGACGAGCCCCA.......................................................................................................................................................................................................................................................................

2.00

7.00

0.50

1.00

......................................................GTCCCGGACGAGCCCCCAT.....................................................................................................................................................................................................................................................................

1.50

7.00

0.50

......................................................GTCCCGGACGAGCCCGC.......................................................................................................................................................................................................................................................................

1.00

0.00

1.00

............................................................................GGCGGAGGAGGGTCCGAAGG..............................................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................TCCCGGACGAGCCCGGCTTTA..................................................................................................................................................................................................................................................................

1.00

........................................................................................................................................................................................................................................................................................................CGATTCCACCAACCTGAAGATA................

1.00

0.00

1.00

................................CCGCTGTCTGGCCTGCGC............................................................................................................................................................................................................................................................................................

1.00

.....CCCCGACCTGCCAGGGGGC......................................................................................................................................................................................................................................................................................................................

1.00

.....................................................AGTCCCGGACGAGCCCCTA......................................................................................................................................................................................................................................................................

1.00

0.50

...................................................................................................................................................................................................TGGCGTCAGGGACAAGCTAGGGCTAGGGAG.............................................................................................................

1.00

.......................................................TCCCGGACGAGCCCG........................................................................................................................................................................................................................................................................

1.00

0.50

0.25

.......CCGACCTGCCAGGGGGCG.....................................................................................................................................................................................................................................................................................................................

1.00

..................................................GTGAGTCCCGGACGAGCCC.........................................................................................................................................................................................................................................................................

1.00

..................................................................................GGAGGGTCCGCGGTACCGGCCGGGAGATGTG.............................................................................................................................................................................................................................

1.00

......................................................GTCCCGGACGAGCCCCCAA.....................................................................................................................................................................................................................................................................

1.00

7.00

0.50

1.00

.......................................................TCCCGGACGAGCCCGGC......................................................................................................................................................................................................................................................................

1.00

0.50

.....................................................AGTCCCGGACGAGCCTC........................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................TGGGGCGGAGGAGGGTCCGCGGTA.............................................................................................................................................................................................................................................

1.00

..................................................................................................................................................................................................CTGGCGTCAGGGACAAGCTAGG......................................................................................................................

1.00

...............................................CGCGTGAGTCCCGGACGAGCCCGGCCTGG..................................................................................................................................................................................................................................................................

1.00

.....................................................AGTCCCGGACGAGCCC.........................................................................................................................................................................................................................................................................

1.00

0.50

.........................................................CCGGACGAGCCCGGCCCGGC.................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................................................ATCACCTCCTCACTCTCCGGC....................................................................

1.00

0.00

1.00

....................................................GAGTCCCGGACGAGCCCCCA......................................................................................................................................................................................................................................................................

1.00

0.00

1.00

........................................................CCCGGACGAGCCCGGC......................................................................................................................................................................................................................................................................

1.00

0.50

1.00

.........................................................CCGGACGAGCCCGGC......................................................................................................................................................................................................................................................................

0.67

0.33

......................................................GTCCCGGACGAGCCCACT......................................................................................................................................................................................................................................................................

0.50

7.00

0.50

.......................................................TCCCGGACGAGCCCGGCTA....................................................................................................................................................................................................................................................................

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCCAAT.....................................................................................................................................................................................................................................................................

0.50

7.00

0.50

......................................................GTCCCGGACGAGCCCT........................................................................................................................................................................................................................................................................

0.50

7.00

0.50

.....................................................AGTCCCGGACGAGCCCTCA......................................................................................................................................................................................................................................................................

0.50

1.00

0.50

......................................................GTCCCGGACGAGCCCCCTA.....................................................................................................................................................................................................................................................................

0.50

7.00

0.50

......................................................GTCCCGGACGAGCCCAAA......................................................................................................................................................................................................................................................................

0.50

7.00

0.50

......................................................GTCCCGGACGAGCCCCCAC.....................................................................................................................................................................................................................................................................

0.50

7.00

0.50

......................................................................................................................................................................................................................GGGCTAGGGAGATAGGT.......................................................................................................

0.50

........................................................CCCGGACGAGCCCGGCTTA...................................................................................................................................................................................................................................................................

0.50

1.00

0.50

........................................................CCCGGACGAGCCCGGCTCT...................................................................................................................................................................................................................................................................

0.50

1.00

0.50

.......................................................TCCCGGACGAGCCCGCC......................................................................................................................................................................................................................................................................

0.25

1.00

0.25

.......................................................TCCCGGACGAGCCCGTAG.....................................................................................................................................................................................................................................................................

0.25

1.00

0.25

.......................................................TCCCGGACGAGCCCGCAA.....................................................................................................................................................................................................................................................................

0.25

1.00

0.25