ID: uc001bjw.2_intron_1_0_chr1_25570125_r.5p
GENE: (3)
chr1:25571441-25571690-


(2)
AGO2.ip 		(3)
B-CELL 		(1)
BRAIN 		(1)
BREAST 		(11)
CELL-LINE 		(2)
HEART 		(1)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(11)
SKIN 		(1)
XRN.ip

Sense strand
AAGAAACAAGCCGTGGAATAGGTGTATCAAGTAATGGTGCAAAGCCTGAAGTAAGTATTCTAGGTTTGTCGGAACAAAACTTTCAGAAAGCCAACTGTCAAATCTGATTAGCCACTTATATCTTAGACTATACTTTTTGGGAAGTCTAGAGATGTATATAATGTGCTAAATTCAAAGTAGCAAATCTGAAGATAGGCAATGTCAAACCCATGAAAATGGGAGATTAATGAGCTTTATTTGGCCGTGCATG
.................................................................(((((..........(((((((..((..(((.(((....)))(((((((..(((((((((((((...((....))..))))).)))))))).....)).)))))......))).))...)))))))...)))))...................................................
................................................................65.....................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................CGGAACAAAACTTTCAGAAAGC...............................................................................................................................................................22110.0010.00-10.00--------------------------------
...............................................GAAGTAAGTATTCTAGGTTTGTCGGAA................................................................................................................................................................................27110.0010.00--10.00-------------------------------
..............................................................................................................................................AGTCTAGAGATGTATATAATGTGCTAAATTCAAAGTAGCAAATCTGAAGATAGGCAATGTCAAACCC.........................................6714.004.00-----4.00----------------------------
..................................................GTAAGTATTCTAGGTTTGTCGGAACAAAA...........................................................................................................................................................................2913.003.00--------------------------1.00-1.00---1.00-
..............................................TGAAGTAAGTATTCTAGGTTTGTCGGAACA..............................................................................................................................................................................3012.002.00---1.00------------1.00-----------------
.....................................................................CGGAACAAAACTTTCAGAAAGT...............................................................................................................................................................222.000.00-2.00--------------------------------
..................................................GTAAGTATTCTAGGTTTGTCGGAA................................................................................................................................................................................2412.002.00----1.00--------------------------1.00--
..................................................GTAAGTATTCTAGGTTTG......................................................................................................................................................................................1812.002.00---------2.00------------------------
............................................................................................AACTGTCAAATCTGATTAGCCACTTATA..................................................................................................................................2812.002.002.00---------------------------------
..................................................GTAAGTATTCTAGGTTTGTCGGA.................................................................................................................................................................................2312.002.00----2.00-----------------------------
.............................................................................................................................................................................AAAGTAGCAAATCTGAAGATAGGCAA...................................................2612.002.001.00--1.00------------------------------
............................................................TAGGTTTGTCGGAACAAAA...........................................................................................................................................................................1912.002.002.00---------------------------------
.............................................................AGGTTTGTCGGAACAAAA...........................................................................................................................................................................1812.002.002.00---------------------------------
.......................................................TATTCTAGGTTTGTCGGAACAAAACTTTCAG....................................................................................................................................................................3111.001.00--------------1.00-------------------
..............................................TGAAGTAAGTATTCTAGGTTTGTCGG..................................................................................................................................................................................2611.001.00------------------------------1.00---
.............................................................................................................................................................................AAAGTAGCAAATCTGAAGATAGGCAAT..................................................2711.001.001.00---------------------------------
...............................................GAAGTAAGTATTCTAGGTTTG......................................................................................................................................................................................2111.001.00----1.00-----------------------------
............................................................................................................................................................................CAAAGTAGCAAATCTGAAGATAGG......................................................2411.001.001.00---------------------------------
...................................................TAAGTATTCTAGGTTTGTCGGAACAAAA...........................................................................................................................................................................2811.001.00----------1.00-----------------------
........................................................ATTCTAGGTTTGTCGGAACAAAA...........................................................................................................................................................................2311.001.001.00---------------------------------
...............................................................................................................................................................................AGTAGCAAATCTGAAGATAG.......................................................2011.001.00---------------1.00------------------
..............................................................................................................................................................................AAGTAGCAAATCTGAAGATAGGCAATGT................................................2811.001.00---1.00------------------------------
............GTGGAATAGGTGTATCAAGT..........................................................................................................................................................................................................................2011.001.00-----------------------1.00----------
...................................................................................................................................................................................................................................TGAGCTTTATTTGGCTTTT....191.000.00----------------------1.00-----------
.................................................................................................................................ATACTTTTTGGGAAGTCTAGAGATG................................................................................................2511.001.00-------------------------1.00--------
..................................................................................................................................................................................................................TGAAAATGGGAGATTAATGAGCTTTATTTGGCCGT.....3511.001.00-----------1.00----------------------
.............................................................................................................................................................................AAAGTAGCAAATCTGAAGATAGGCAATGT................................................2911.001.001.00---------------------------------
...................................................TAAGTATTCTAGGTTTGTCGG..................................................................................................................................................................................2111.001.00------------------------1.00---------
.............................................................AGGTTTGTCGGAACAAAAC..........................................................................................................................................................................1911.001.001.00---------------------------------
..............................................................................................................................................................................AAGTAGCAAATCTGAAGATAGGCAAT..................................................2611.001.00---1.00------------------------------
.........................................................TTCTAGGTTTGTCGGAA................................................................................................................................................................................1711.001.00-----------------1.00----------------
..................................................GTAAGTATTCTAGGTTTGTCGG..................................................................................................................................................................................2211.001.00--------1.00-------------------------
..............................................TGAAGTAAGTATTCTAGGTTT.......................................................................................................................................................................................2111.001.001.00---------------------------------
........................................................ATTCTAGGTTTGTCGGAA................................................................................................................................................................................1811.001.00---------------------1.00------------
..............................................................................................................................................................................AAGTAGCAAATCTGAAGATAGGCAA...................................................2511.001.00---1.00------------------------------
........................................................ATTCTAGGTTTGTCGGAAC...............................................................................................................................................................................1911.001.00------------1.00---------------------
..............................................................................................................................................................................AAGTAGCAAATCTGAAGATAGGCAATG.................................................2711.001.001.00---------------------------------
.............................................................................................................................................................................AAAGTAGCAAATCTGAAGA..........................................................1911.001.00-------------------1.00--------------
..........................................................TCTAGGTTTGTCGGAACAA.............................................................................................................................................................................1911.001.00-------------1.00--------------------
.............................................CTGAAGTAAGTATTCTAGGTTTGTCGGA.................................................................................................................................................................................2811.001.00--------------------1.00-------------
...............................................................................................................................................................................AGTAGCAAATCTGAAGATAGGCA....................................................2311.001.00---------------------------1.00------
............................................................................................................................................................................................................................AGATTAATGAGCTTTATTT...........1911.001.00---1.00------------------------------
..................................................GTAAGTATTCTAGGTTTGTCGGAAC...............................................................................................................................................................................2511.001.00--------1.00-------------------------
.AGAAACAAGCCGTGGAATAG.....................................................................................................................................................................................................................................2011.001.001.00---------------------------------
...............................................................................................................................................................................AGTAGCAAATCTGAAGATAGGCAATGT................................................2711.001.00------1.00---------------------------
..................................................................................TCAGAAAGCCAACTGTCAAATA..................................................................................................................................................221.000.00-------1.00--------------------------
..................................................................................TCAGAAAGCCAACTGTCAAATC..................................................................................................................................................2211.001.00-------1.00--------------------------
...................................GGTGCAAAGCCTGAACT......................................................................................................................................................................................................171.000.00------1.00---------------------------
.....................................................................CGGAACAAAACTTTCAGA...................................................................................................................................................................1811.001.00------------------1.00---------------
...........................................................CTAGGTTTGTCGGAACAAAA...........................................................................................................................................................................2011.001.00-----------------------------1.00----
.............................................................AGGTTTGTCGGAACA..............................................................................................................................................................................1520.500.50------0.50---------------------------
................................................................................................................................................................................GTAGCAAATCTGAAG...........................................................1590.110.11----------0.11-----------------------

Antisense strand
AAGAAACAAGCCGTGGAATAGGTGTATCAAGTAATGGTGCAAAGCCTGAAGTAAGTATTCTAGGTTTGTCGGAACAAAACTTTCAGAAAGCCAACTGTCAAATCTGATTAGCCACTTATATCTTAGACTATACTTTTTGGGAAGTCTAGAGATGTATATAATGTGCTAAATTCAAAGTAGCAAATCTGAAGATAGGCAATGTCAAACCCATGAAAATGGGAGATTAATGAGCTTTATTTGGCCGTGCATG
.................................................................(((((..........(((((((..((..(((.(((....)))(((((((..(((((((((((((...((....))..))))).)))))))).....)).)))))......))).))...)))))))...)))))...................................................
................................................................65.....................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................CAAGTAATGGTGCAAGAA............................................................................................................................................................................................................. 181.000.00---------------------------------1.00
.................................................................................CAGTTGGCTTTCTGAA......................................................................................................................................................... 1660.170.17------0.17---------------------------