uc001bdo.1_intron_4_0_chr1_20980865

CGGGCTCTTCCACCTCTTACTCCTTCTTCCCGGACAAGCCTATCACCCAGGTAAGGGCTTCACAACCTTGAGGCTTCGAAATAAAAATGAAGCAGAACAGCACATTTGGCTGAGGCGAAGGAAATGACTAGTTGGTGGGGTGGGGCATGGGCAGAAGCGGTGTGGTCTCAGGCTCCCCCTTCAGGTAGGGCCAGGGTCGTTTTGGTCTGGCCTGCTGTCCTCTTGTTCGGGAGGCGTGGCAGCTTTTCCCTTACTTGGAACTGCTTGGGTCACAGCCTCGTTTTGTTCCCAGTATCCACATGCGGTGGGGAAGAACACCCTCCTCATTGCTGGGCTCCAGGC
........................................................................................................................................((((.(((((.(((((....((...)).))).)).)))))))))..................................................................................................................................................................
......................................................................................................................................135...................................................189.......................................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189784

SRR189782

SRR189785

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR343334

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

SRR040010(GSM532895)
G529N. (cervix)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

TAX577740(Rovira)
total RNA. (breast)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

TAX577738(Rovira)
total RNA. (breast)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

.......................................................................................................................................................................TCAGGCTCCCCCTTCCCG.............................................................................................................................................................

28.00

0.00

15.00

6.00

1.00

...........................TCCCGGACAAGCCTATCACCCAC....................................................................................................................................................................................................................................................................................................

5.00

0.00

5.00

...........................................................................................................................................................................................................................................................................................................ATGCGGTGGGGAAGAAC..........................

3.00

2.00

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCCT.............................................................................................................................................................

3.00

0.00

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCCGA............................................................................................................................................................

3.00

0.00

3.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCAG.............................................................................................................................................................

2.00

0.00

2.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCGG.............................................................................................................................................................

2.00

0.00

1.00

...........................................................................................................................................GTGGGGCATGGGCAGAAGCGG......................................................................................................................................................................................

1.00

..............................................................................................................................ACTAGTTGGTGGGGTAAC......................................................................................................................................................................................................

1.00

0.00

1.00

..............TCTTACTCCTTCTTCCCGGAC...................................................................................................................................................................................................................................................................................................................

1.00

....CTCTTCCACCTCTTACTCCTCCCG..........................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

................................................................................................................................................................TGTGGTCTCAGGCTCTC.....................................................................................................................................................................

1.00

0.00

1.00

.................TACTCCTTCTTCCCGGACAAGCC..............................................................................................................................................................................................................................................................................................................

1.00

..........................................................................................................................................................................................................................................................................................................CATGCGGTGGGGAAGAACA.........................

1.00

.................................ACAAGCCTATCACCCA.....................................................................................................................................................................................................................................................................................................

1.00

.........................................................................................................................................................................................................................................................................TGGGTCACAGCCTCGTTTTGTTCCCAGA.................................................

1.00

0.00

1.00

.....................CCTTCTTCCCGGACAAG................................................................................................................................................................................................................................................................................................................

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCTCG.............................................................................................................................................................

1.00

0.00

1.00

.....................CCTTCTTCCCGGACAAGCCTAT...........................................................................................................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................................................................................................................CCCTCCTCATTGCTGGGCTCCAGGC

1.00

....................................................................................................................................................................................................................................................................................................................GGAAGAACACCCTCCTCATTGCTGGGCTCCAGG.

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCTG.............................................................................................................................................................

1.00

0.00

1.00

..........................TTCCCGGACAAGCCTATCACCCAGTAT.................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................GTCGTTTTGGTCTGGGGA.................................................................................................................................

1.00

0.00

1.00

..........CACCTCTTACTCCTTCTTCCCG......................................................................................................................................................................................................................................................................................................................

1.00

....CTCTTCCACCTCTTACTCCTTCTTCCCG......................................................................................................................................................................................................................................................................................................................

1.00

................................GACAAGCCTATCACCCAG....................................................................................................................................................................................................................................................................................................

1.00

........................................................................................................................................................................................................................................................................................................CACATGCGGTGGGGAAGAACACCCTCCTC.................

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCCCCT............................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................................................................................AGGTAGGGCCAGGGTCGGAAC...........................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................................................................................................................GTATCCACATGCGGTGGGGAAGAACA.........................

1.00

.......................................................................................................................................................................TCAGGCTCCCCCTTCACG.............................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................................................................................................ATGCGGTGGGGAAGAACA.........................

1.00

....................................................................................................................................................................................................................................................................................................TATCCACATGCGGTGGGGAAGAA...........................

1.00

.....................CCTTCTTCCCGGACAGAA...............................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...............................................................................................................GAGGCGAAGGAAATGGA......................................................................................................................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................................TCGGGAGGCGTGGCAGGAGG................................................................................................

1.00

0.00

1.00

..................ACTCCTTCTTCCCGG.....................................................................................................................................................................................................................................................................................................................

0.50

CGGGCTCTTCCACCTCTTACTCCTTCTTCCCGGACAAGCCTATCACCCAGGTAAGGGCTTCACAACCTTGAGGCTTCGAAATAAAAATGAAGCAGAACAGCACATTTGGCTGAGGCGAAGGAAATGACTAGTTGGTGGGGTGGGGCATGGGCAGAAGCGGTGTGGTCTCAGGCTCCCCCTTCAGGTAGGGCCAGGGTCGTTTTGGTCTGGCCTGCTGTCCTCTTGTTCGGGAGGCGTGGCAGCTTTTCCCTTACTTGGAACTGCTTGGGTCACAGCCTCGTTTTGTTCCCAGTATCCACATGCGGTGGGGAAGAACACCCTCCTCATTGCTGGGCTCCAGGC ........................................................................................................................................((((.(((((.(((((....((...)).))).)).))))))))).................................................................................................................................................................. ......................................................................................................................................135...................................................189.......................................................................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189784	SRR189782	SRR189785	SRR037944(GSM510482) 293DcrTN_cand5. (cell line)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart)	SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line)	SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart)	SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin)	SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line)	SRR343334	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell)	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line)	SRR040010(GSM532895) G529N. (cervix)	SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver)	GSM359180(GSM359180) hela_phil_smrna_cyto. (hela)	SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast)	TAX577740(Rovira) total RNA. (breast)	SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR037932(GSM510470) 293cand4_rep1. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin)	SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR015448(SRR015448) cytoplasmic small RNAs. (breast)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin)	SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart)	SRR060169(GSM565979) 5-8F_cytoplasm. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	TAX577738(Rovira) total RNA. (breast)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin)	SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................GGCTCCCCCTTCAGGA............................................................................................................................................................	16		7.00	0.00	-	-	-	-	-	-	-	-	1.00	2.00	2.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
.....................................................................................................................................................................TCTCAGGCTCCCCCTAACG..............................................................................................................................................................	19		3.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	1.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TCTCAGGCTCCCCCTAAC...............................................................................................................................................................	18		2.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................AGAGGACAGCAGGCCAGACC.......................................................................................................................	20	1	2.00	2.00	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................AAATGAAGCAGAACAATCG...............................................................................................................................................................................................................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................................................................GTGGATACTGGGAACAAAACGAGGC...........................................	25	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
...........................................................................................................................................................................GCTCCCCCTTCAGGTTGTC........................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............TCTTACTCCTTCTTCCTGAG....................................................................................................................................................................................................................................................................................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................................................................................................................GTGGATACTGGGAACAAAACGA...........................................	22	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................................................................TGGATACTGGGAACAAAACGAGGCTG............................................	26	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................................................................CTGGGAACAAAACGAGGC..................................................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................................................................................................................................................AAGAACACCCTCCTCTTTT.............	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................................................................................................................................................AAGAACACCCTCCTCATTT.............	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
..........................................................................................................................................................................................................................................................................................................................ACACCCTCCTCATTGCATAG........	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-