ID: uc001bbg.2_intron_19_0_chr1_19430752_r
GENE: (1)
chr1:19430702-19431128-


(2)
BRAIN
(1)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(3)
HEART
(3)
HELA
(1)
OTHER
(4)
SKIN
(1)
UTERUS

Sense strand
TACCCTGAGTACCGATCTGCAGCAGGGTTATGCCCTTAAAAGTCTCACAGGTAAAGAGCCACCTGGACCTTCCTTTAGGGCATCCTGAATCTGTTTAGGGACAACCCTTAGTTCCTTGGGTGCTGGGGTTGACTCTCTTCTCTCTGGTACTGACCTTAGTGCAGATTTAAGCTCTGCATTTTTTTTCTGTATTGATACGTTTATGATTTTGAGACCCTGTTTGCTATTGACTGTTTCCGCTTGTTGAACACCTGCTCTGTGCCATGCACAAAGATAGATTTTCCCTGCTTTTTGAGTTGCTCATAATCTTTTGAGACACAGACTGTCCTTATGTTTTCATCCAGAGCTCTCACAGCAACATTTTCCTGTCTCCACAGGCCTTCTCTCCTCCTTTGTTGAGGTGGAATCCATCAAAAGACATTTTAAA
...........................................................................((((((....(((((((((..((((.((((((.((((.((...)).)))))))))).)))).....((..(((....)))..)).))))))))).))))))...........................................................................................................................................................................................................................................................
.......................................................................72..............................................................................................................184.................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040024(GSM532909)
G613N. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
..............................................................................................................................................................................................................................................................................................................ATAATCTTTTGAGACACAGACTGTCCTTATGTTTTCATCCAGAGCTCTCACAGCAACATTTTCCTGTCTCCACAG..................................................75124.0024.0016.008.00----------------------
...............................................................................................................................................................................................................................................................................................................TAATCTTTTGAGACACAGACTGTCCTTATGTTTTCATCCAGAGCTCTCACAGCAACATTTTCCTGTCTCCACAG..................................................74117.0017.0017.00-----------------------
.................................................................................................................................................................................................................................................................................................................ATCTTTTGAGACACAGACTGTCCTTATGTTTTCATCCAGAGCTCTCACAGCAACATTTTCCTGTCTCCACAG..................................................7216.006.006.00-----------------------
.................................................................................................................................................................CAGATTTAAGCTCTGGTTC.......................................................................................................................................................................................................................................................192.000.00---2.00--------------------
......................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTTGAGGTGGAATCCAT................2111.001.00--1.00---------------------
.....TGAGTACCGATCTGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------1.00-----------
.....................................................................................................................................................................................................................................................................................................................................................................................................CCTTTGTTGAGGTGGAATCC..................2011.001.00-------------------1.00----
............................................................................AGGGCATCCTGAATCTGT.............................................................................................................................................................................................................................................................................................................................................1811.001.00--------------1.00---------
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCCATCAAAAGACATTTT...2311.001.00---------1.00--------------
...........................................................................................................................................................................................................................................................................................................................................................TCTCACAGCAACATTTTCCTGTCTCCACAG..................................................3011.001.00------1.00-----------------
......................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTTGAGGTGGAATCC..................1911.001.00------------------1.00-----
................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATCCATCAAAAGAC........1911.001.00--------1.00---------------
..........ACCGATCTGCAGCAGGGTTA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------1.00-------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGAGGTGGAATCCATCAAAAG..........2611.001.00-------1.00----------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGGTGGAATCCATC...............1911.001.00--1.00---------------------
...........................TTATGCCCTTAAAAGTCCTT............................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------------1.00---
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGGTGGAATCCATCAAAAG..........2411.001.00-----------1.00------------
.................................................................................................................................................................................................................................................................................................................................................................................CTCCACAGGCCTTCTCTCCTCCT...................................2311.001.00----------------1.00-------
..........................................................CCACCTGGACCTTCCT.................................................................................................................................................................................................................................................................................................................................................................1630.330.33---------------------0.33--
........................................................................................................................................................................................................................................................................................................................................................................................GGCCTTCTCTCCTCCT...................................1680.250.25----------------------0.25-
......................................................................................................................................................................................................................................................................................................................................................................CATTTTCCTGTCTCCAC....................................................1740.250.25-----------------------0.25

Antisense strand
TACCCTGAGTACCGATCTGCAGCAGGGTTATGCCCTTAAAAGTCTCACAGGTAAAGAGCCACCTGGACCTTCCTTTAGGGCATCCTGAATCTGTTTAGGGACAACCCTTAGTTCCTTGGGTGCTGGGGTTGACTCTCTTCTCTCTGGTACTGACCTTAGTGCAGATTTAAGCTCTGCATTTTTTTTCTGTATTGATACGTTTATGATTTTGAGACCCTGTTTGCTATTGACTGTTTCCGCTTGTTGAACACCTGCTCTGTGCCATGCACAAAGATAGATTTTCCCTGCTTTTTGAGTTGCTCATAATCTTTTGAGACACAGACTGTCCTTATGTTTTCATCCAGAGCTCTCACAGCAACATTTTCCTGTCTCCACAGGCCTTCTCTCCTCCTTTGTTGAGGTGGAATCCATCAAAAGACATTTTAAA
...........................................................................((((((....(((((((((..((((.((((((.((((.((...)).)))))))))).)))).....((..(((....)))..)).))))))))).))))))...........................................................................................................................................................................................................................................................
.......................................................................72..............................................................................................................184.................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040024(GSM532909)
G613N. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
.....................................................................................................................................................................................................................................................................................................................................................TGTTGCTGTGAGAGCTCTG................................................................... 1911.001.00-----------------1.00------
.....................................................................................................................................................................................................................................................................CCATGCACAAAGATAAGTG................................................................................................................................................... 191.000.00---------------1.00--------
.............................................................................................................................GGGTTGACTCTCTTCTA............................................................................................................................................................................................................................................................................................. 171.000.00-------------1.00----------
...........................................................................................................................TGGGGTTGACTCTCTTTA.............................................................................................................................................................................................................................................................................................. 181.000.00----1.00-------------------