ID: uc001bal.2_intron_5_0_chr1_17743143_r.3p
GENE: (6)
chr1:17743093-17743342-


(1)
AGO2.ip
(5)
B-CELL
(2)
BRAIN
(11)
BREAST
(25)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(3)
HELA
(1)
KIDNEY
(3)
OTHER
(72)
SKIN
(1)
TESTES

Sense strand
AAAATTGATTTCACTGACCCACTCACTGTGCTGTGCCTAAGATTGGAAATGCTGCCTTTGTTGACCAACGTGTGCTGGTCTAAGGCCCAGAAGGGCCAGATTGGGGTGCTGCCGGGGCTCACTACAGAGTCCGTGTGAGCACACTGACACGTCCCTTGTGCTTGTGCTGCTGCTGATGGCCGGCTCTGTGGTCTCTACAGGACACAACTCAGATGGGAAGTTCATCGCCCGGGCACAGCGGATAGAGTAC
.........................................................................(((((((...(((((....)))))..........((.((..((((((......))))))(((..((((((..((....))...))))))..))).)).))....))))))).((((((...))))))..................................................
.....................................................................70................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR343333(GSM796036)
KSHV (HHV8). (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM532879(GSM532879)
G659N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038859(GSM458542)
MM386. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
...........................................................................TGGTCTAAGGCCCAGA...............................................................................................................................................................163348.00348.00-80.3350.0042.3339.0014.67-4.331.331.335.671.334.676.005.674.673.672.003.672.671.333.671.672.333.673.673.001.001.67-1.672.003.001.671.001.33-0.332.332.330.332.331.332.332.670.330.331.330.67-0.330.671.001.331.331.00--2.001.000.670.330.670.671.00-0.330.33-1.000.67-0.330.670.670.330.671.00--0.33-1.00----1.00----0.330.670.67-0.330.67--0.330.33-0.330.33------0.33-0.33-0.33--------------------
..........................................................................CTGGTCTAAGGCCCAGA...............................................................................................................................................................171120.00120.00111.00------1.00----------1.001.001.00------1.00-----1.001.00--1.00----------------------------1.00---------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAG................................................................................................................................................................15570.4070.40-7.407.006.404.004.00-3.401.601.400.800.601.001.600.600.801.000.800.802.201.401.401.60-0.60-0.200.200.60--1.800.801.001.600.60-0.400.20-1.000.400.400.20--0.400.400.40--0.600.600.200.600.40----0.600.400.200.200.20--0.60----0.800.600.200.200.200.20--0.80-----------0.20-------0.200.200.200.200.200.20--------------------0.200.20--------
...........................................................................TGGTCTAAGGCCCAGACTC............................................................................................................................................................19339.00348.00--1.000.332.33--1.676.337.332.004.000.33-0.33-0.670.670.33-0.67--0.670.33---0.33------0.33----0.33-0.67--1.00-0.330.33-0.330.67-0.33-----0.67-0.33------------0.33-0.33-0.670.67------------------0.33---0.33------0.33---------0.33--0.330.330.33-----------
...........................................................................TGGTCTAAGGCCCAGAC..............................................................................................................................................................17319.67348.00-1.330.332.330.67--0.670.33--1.330.33-0.330.330.671.33--0.33--0.33---0.670.67-0.33----0.33-0.330.33---0.33---0.33-0.671.330.33-0.33--0.33-----0.330.33-------0.33----0.33------------------------------------0.33-0.33--0.330.33-----------------
...........................................................................TGGTCTAAGGCCCAGACTCA...........................................................................................................................................................20315.00348.00---1.00----0.33---1.33--0.670.67-0.33----0.33--0.330.33-----------0.330.33---------0.33--0.33-----0.330.33-0.67--1.67-0.670.670.33---------0.33------------0.33--0.67--0.330.67--------0.33-0.33-----0.33----0.33--------------
............................................................................GGTCTAAGGCCCAGAC..............................................................................................................................................................1669.337.50-0.170.33--0.17-0.17----0.17----1.33--0.67--0.50--0.17-0.17-0.83----0.50-0.330.33--0.17----0.330.33-------0.17----0.330.17--0.17-0.33---0.33-------0.500.17--------------------------0.17------------------0.33----------
............................................................................GGTCTAAGGCCCAGA...............................................................................................................................................................1567.507.500.330.330.330.67---0.17--0.330.170.170.170.170.17-0.17---0.17-0.17-0.670.50-0.50------0.17---0.17---0.170.17-0.17-0.17-----------------------0.17--0.17-----------------0.170.17-------------------------0.33--------0.17-0.17----
.............................................................................GTCTAAGGCCCAGAATC............................................................................................................................................................177.000.00------7.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGAATC............................................................................................................................................................197.000.00------7.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CGGGCACAGCGGATAGAGTA.2015.005.00-----------------------------4.00------1.00---------------------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGACT.............................................................................................................................................................1833.67348.00---0.330.33---0.33-------------0.330.33-----------0.33-0.33--------0.67--------------0.33---------------------------------------------0.33----------------------------
............................................................................GGTCTAAGGCCCAGACTC............................................................................................................................................................1863.507.50---0.17------0.17----0.330.17--------------------0.50--0.17--0.17--------0.33--0.17--------0.17----0.17-----0.17--------------------0.17--------0.170.17-----------------------0.17---0.17-
............................................................................GGTCTAAGGCCCAGACTCA...........................................................................................................................................................1963.007.50------------0.17----0.17--0.17---------------------0.17---0.33-0.17--0.17--0.17---------0.17---0.83-----------------------------------------------------------0.17---0.17--0.17
..........................................................................CTGGTCTAAGGCCCAGAC..............................................................................................................................................................1813.00120.003.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CTGGTCTAAGGCCCAGACTC............................................................................................................................................................2012.00120.002.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GGGCACAGCGGATAGAGTA.1912.002.00------------------------------------2.00---------------------------------------------------------------------------------------------------
..........................................................................CTGGTCTAAGGCCCAG................................................................................................................................................................1631.331.331.33---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................ACAGGACACAACTCAGATGGGTA...............................231.000.00-----------------------------------------------------------------------------------1.00----------------------------------------------------
........................................................................................AGAAGGGCCAGATTGTC.................................................................................................................................................171.000.00------------------------------------------------------------------------------------------1.00---------------------------------------------
...................................................................................................................................................................................CCGGCTCTGTGGTCTCTACA...................................................2011.001.00---------------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TCGCCCGGGCACAGCGGA........1811.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CTACAGGACACAACTCAGATGGG.................................2311.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................TAAGGCCCAGAAGGGCCAGATTGGGGTGCTG...........................................................................................................................................3111.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
.......ATTTCACTGACCCACTCACTGTGCT..........................................................................................................................................................................................................................2511.001.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGGGAAGTTCATCGCCCGGGCACAGCGG.........2811.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------
.....................................................................................................................................................................................................................................CGGGCACAGCGGATAGAG...1811.001.00-------------------------------------------------------------------------------------1.00--------------------------------------------------
.....TGATTTCACTGACCCACTCA.................................................................................................................................................................................................................................2011.001.00---------------------------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AGTTCATCGCCCGGGCACAG............2011.001.00-----------------------------------------------------------------------------------------1.00----------------------------------------------
................................................................................................................................GTCCGTGTGAGCACACTGACACGTCCCTTGTGCTTGTGCTGCTGCTGATGGCCGGCTCTGTGGTCTCTACAG..................................................7211.001.00----------------------------------------------------------------------------------------1.00-----------------------------------------------
..................................................................................................................................................................................GCCGGCTCTGTGGTCTGC......................................................181.000.00-------------------------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AAGTTCATCGCCCGGGCACAGCGG.........2411.001.00---------------------------------------------------------------------------------1.00------------------------------------------------------
....................................................................................................................................................................................................ACAGGACACAACTCAGATGGGAA...............................2311.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------
.........................................................................................................................................................................................................................AAGTTCATCGCCCGGGTA...............181.000.00-----------------------------------------------------------------------1.00----------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGAATCAA..........................................................................................................................................................211.000.00------------------------------------------------------------------------------------1.00---------------------------------------------------
.........................................................................................................................................................................CTGCTGATGGCCGGCTCTGTGG...........................................................2211.001.00---------------------------------------------------------1.00------------------------------------------------------------------------------
..........................................................................CTGGTCTAAGGCCCAGACTCA...........................................................................................................................................................2111.00120.001.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CAGATGGGAAGTTCATCGCCCGGGCACAGCG..........3111.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................GGTCTAAGGCCCAGACT.............................................................................................................................................................1761.007.50-------0.17------------0.17-0.17-----0.17-----------------------------------------0.17--------------------------------------------------------------0.17--
...........................................................................TGGTCTAAGGCCCAGACTCT...........................................................................................................................................................2030.67348.00----------------------0.33----------------0.33------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAAGTTCATCGCCCGGGC................1920.500.50-----------------------------------------------------------------------0.50----------------------------------------------------------------
........................................................................................................................................................................................................................GAAGTTCATCGCCCGGGC................1820.500.50------------------------------------0.50---------------------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGT...............................................................................................................................................................1650.4070.40----0.20----------------------------------------------0.20------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGAGTCA...........................................................................................................................................................2030.33348.00------------------0.33---------------------------------------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGAGTC............................................................................................................................................................1930.33348.00---------------------------------------------0.33------------------------------------------------------------------------------------------
...........................................................................TGGTCTAAGGCCCAGC...............................................................................................................................................................1650.2070.40----0.20-----------------------------------------------------------------------------------------------------------------------------------
............................................................................GGTCTAAGGCCCAGACTA............................................................................................................................................................1860.177.50------------------------------------------------------------------------------------------------0.17---------------------------------------

Antisense strand
AAAATTGATTTCACTGACCCACTCACTGTGCTGTGCCTAAGATTGGAAATGCTGCCTTTGTTGACCAACGTGTGCTGGTCTAAGGCCCAGAAGGGCCAGATTGGGGTGCTGCCGGGGCTCACTACAGAGTCCGTGTGAGCACACTGACACGTCCCTTGTGCTTGTGCTGCTGCTGATGGCCGGCTCTGTGGTCTCTACAGGACACAACTCAGATGGGAAGTTCATCGCCCGGGCACAGCGGATAGAGTAC
.........................................................................(((((((...(((((....)))))..........((.((..((((((......))))))(((..((((((..((....))...))))))..))).)).))....))))))).((((((...))))))..................................................
.....................................................................70................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR343333(GSM796036)
KSHV (HHV8). (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
GSM532879(GSM532879)
G659N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038859(GSM458542)
MM386. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
..................................................................................................................................................................................................................AGATGGGAAGTTCATATA...................... 181.000.00-------------------------------------------------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................................GGAAGTTCATCGCCCGGGCACAGCGTG........ 271.000.00--------------------------------------------------1.00-------------------------------------------------------------------------------------
......................TCACTGTGCTGTGCCTTAGG................................................................................................................................................................................................................ 201.000.00--------------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................TGGGGTGCTGCCGGGGCTCGGA............................................................................................................................... 221.000.00---------------------------------------------------------1.00------------------------------------------------------------------------------
........................................................................................................................................................................................TGTAGAGACCACAGA................................................... 1560.170.17-------------0.17--------------------------------------------------------------------------------------------------------------------------