ID: uc001azt.2_intron_29_0_chr1_17293067_f.3p
GENE: CROCC(30)
chr1:17294498-17294747+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
B-CELL 		(3)
BRAIN 		(10)
BREAST 		(13)
CELL-LINE 		(3)
CERVIX 		(5)
HEART 		(1)
HELA 		(1)
LIVER 		(3)
OTHER 		(36)
SKIN 		(1)
TESTES

Sense strand
GGGCTCTGGGATCTTCACGTCCACTCATCCTGGGAACGCATGGGGAGACCGAGGACCCCAGAGGGTCCCAGGCCGGCCCCAGGTCACGTAGGTCACCCTTCGAGGCTGCTCCCCACTTTCCCCCTAAGGGCCCCAGGGCGTGTGCGGGAGGGCTGCGGGGTGCACTGGACGTCTGGGCCTGAGCCCCATGCCACCTGCAGGAGAAGATCAGCAAGATGAAGGCCAATGAGACAAAGCTGGAGGGCGACAA
..............................................................................................................................................((((((..(((...(((((((.((((....))))))....)))))..))).))))))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGA.................................................22128.0010.002.00-1.002.00-1.00-2.002.00-1.00-1.00-1.00----2.001.00-2.00-------------1.001.001.00-1.00---------1.00------1.00-----1.00----1.001.00-1.00--------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGT.................................................22124.0010.001.00---1.002.001.00---1.00-1.00---2.001.001.00----1.00---1.001.001.001.001.00--1.00----------1.001.001.00-----------1.001.00------1.00------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAG..................................................21110.0010.001.00-1.00-1.00-1.00-------1.00--1.00--1.00-------------------------------1.00--1.00----------1.00-------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGAA................................................2317.0010.00--1.001.00-----------------1.00----------------------1.00----1.00-1.00--------------------1.00-------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCA...................................................2013.003.001.00------------------------1.00-----------------1.00------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGC....................................................1913.003.001.00--1.00---------------------------------------------------------------------1.00------
.........................................................................................................................................GCGTGTGCGGGAGGGCGCG..............................................................................................193.000.00----1.001.00------------------------------------1.00-------------------------------------
................................................................................................................................................................................................................CAGCAAGATGAAGGCCAATGAGAC..................2412.002.00-----------2.00--------------------------------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGAT................................................2312.0010.00------------------1.00-------------1.00-----------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGTA................................................2312.0010.00--1.00-------------------------------------------------------------1.00---------------
...................................................................................................................................................................................................................CAAGATGAAGGCCAATGAGACAAAGCT............2711.001.00---------------1.00----------------------------------------------------------------
....................................................................................................CGAGGCTGCTCCCCAAG.....................................................................................................................................171.000.00--------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAA..................................................2111.003.00---------------------1.00----------------------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCCGA.................................................2211.003.00-----------------------------------------------------------------1.00--------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGAG................................................2311.0010.00------------------------------------------------1.00-------------------------------
.............................................................................................................................AAGGGCCCCAGGGCGGC............................................................................................................171.000.00-------------1.00------------------------------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGTT................................................2311.0010.00---------1.00----------------------------------------------------------------------
....................................................................................................................................................................................GAGCCCCATGCCACCTGCAGT.................................................211.000.00--1.00-----------------------------------------------------------------------------
..............................................................................................................................................TGCGGGAGGGCTGCGGGGTGCACTG...................................................................................2511.001.00-----------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................................................GCCAATGAGACAAAGCTGGAGGG......2311.001.00---------------1.00----------------------------------------------------------------
...............................................................................................................................................GCGGGAGGGCTGCGGGGG.........................................................................................181.000.00---------------------------------1.00----------------------------------------------
........................................................................................................................................................................................................................TGAAGGCCAATGAGACAAAG..............2011.001.00------------------------1.00-------------------------------------------------------
.........................................................................................................................................GCGTGTGCGGGAGGGTGCG..............................................................................................191.000.00----1.00---------------------------------------------------------------------------
....................................................................................................................................................................................GAGCCCCATGCCACCTGCAGA.................................................211.000.00----------------------------------------------------------------------1.00---------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCAGAAG...............................................2411.0010.00-----------------------------------1.00--------------------------------------------
...................................................................................................................................................................................TGAGCCCCATGCCACCTGCATT.................................................2211.003.00---------1.00----------------------------------------------------------------------
................................................................................................................................................................................................................................AATGAGACAAAGCTGGAGGGCGAC..2411.001.00-----------------------------------------1.00--------------------------------------
..................................................................................................................................................................................CTGAGCCCCATGCCACCTGCAGT.................................................231.000.00------------------------------------------------------1.00-------------------------
..........................................................................................................................................CGTGTGCGGGAGGGCGT...............................................................................................1740.500.25------------------------0.25-------------------------------------------------0.25-----
......................................................................................................................................AGGGCGTGTGCGGGA.....................................................................................................1520.500.50---------------------------------------------------------------------------0.50----
..........................................................................................................................................CGTGTGCGGGAGGGCGCGT.............................................................................................1940.250.25-----------------------------------------------------------------------------0.25--
................................................................................................................................................................................................................CAGCAAGATGAAGGCCAA........................1840.250.25--------------------------------------------------------------------------0.25-----
..........................................................................................................................................CGTGTGCGGGAGGGC.................................................................................................1540.250.25------------------------------------------------------------------------------0.25-
..........................................................................................................................................CGTGTGCGGGAGGGCGCG..............................................................................................1840.250.25----------------------------------------------------------------------------0.25---
..........................................................................................................................................CGTGTGCGGGAGGGCGC...............................................................................................1740.250.25--------------------------------------------------------------------------0.25-----

Antisense strand
GGGCTCTGGGATCTTCACGTCCACTCATCCTGGGAACGCATGGGGAGACCGAGGACCCCAGAGGGTCCCAGGCCGGCCCCAGGTCACGTAGGTCACCCTTCGAGGCTGCTCCCCACTTTCCCCCTAAGGGCCCCAGGGCGTGTGCGGGAGGGCTGCGGGGTGCACTGGACGTCTGGGCCTGAGCCCCATGCCACCTGCAGGAGAAGATCAGCAAGATGAAGGCCAATGAGACAAAGCTGGAGGGCGACAA
..............................................................................................................................................((((((..(((...(((((((.((((....))))))....)))))..))).))))))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
.......................................................................................................................................GGGCGTGTGCGGGAGGCGC................................................................................................ 193.000.00-2.00---------------------1.00--------------------------------------------------------
.............TTCACGTCCACTCATCC............................................................................................................................................................................................................................ 172.000.00------2.00-------------------------------------------------------------------------
.......................................................................................................................................GGGCGTGTGCGGGAGGCGA................................................................................................ 191.000.00-------------------------------------------------------------1.00------------------
.............TTCACGTCCACTCATCCGA.......................................................................................................................................................................................................................... 191.000.00---------------------------------------1.00----------------------------------------
.............................................................................................................................................GTGCGGGAGGGCTGCGGCCG......................................................................................... 201.000.00--------------------------------------------------------------1.00-----------------
..GCTCTGGGATCTTCATCGC..................................................................................................................................................................................................................................... 191.000.00-1.00------------------------------------------------------------------------------
................................................................................................................................GGCCCCAGGGCGTGTTC......................................................................................................... 171.000.00-------------1.00------------------------------------------------------------------
.......................................................................................................................................GGGCGTGTGCGGGAGGCCC................................................................................................ 191.000.00-1.00------------------------------------------------------------------------------
.......................................................................GCCGGCCCCAGGTCAGGG................................................................................................................................................................. 181.000.00----------------------------------------------------------1.00---------------------
.......................................................................................................................................CCTCCCGCACACGCCC................................................................................................... 1611.001.00-1.00------------------------------------------------------------------------------
..................................................................................................................................................ACCCCGCAGCCCTCC......................................................................................... 1590.110.11-------------------------------------------------------------------------------0.11