ID: uc001ayf.2_intron_5_0_chr1_16583255_r.3p
GENE: (5)
chr1:16583205-16583454-


(1)
AGO2.ip 		(6)
BREAST 		(7)
CELL-LINE 		(4)
CERVIX 		(3)
HEART 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(8)
SKIN

Sense strand
TGTTAATAATAAAAGACGTGTGAATTAGTGATGATTTTCTCTCAGACTCAAACCCAGTTTTCTTTCCACCTTTCCTCTACACTTTGTAGTATTAGTTCCCCTTTTGTTGCTCTTCCAGGGAAAGGTGATCTATGGATAGCCTAACTACGGATTGTTGTGAGATCCTGAATGCTAACCATGGTGTTACTGACTTTCCCTAGGGTCCTATCCTTCCCCCAAAGCTGGAGCAACTCTGGTCGTGTACAAGGAC
.............................................................((.(((.........((((.....))))...(((.((.((((((.(((......))).)))))).)).))).))).))...............................................................................................................
.............................................................62.............................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR343335SRR343337SRR343336SRR189784SRR040011(GSM532896)
G529T. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040008(GSM532893)
G727N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................CACCTTTCCTCTACACTAATG...................................................................................................................................................................21125.000.0036.0035.0028.0023.003.00----------------------------------
..................................................................CACCTTTCCTCTACACTAA.....................................................................................................................................................................1931.000.0010.007.0010.004.00-----------------------------------
...................................................................................................................CAGGGAAAGGTGATCTATGGAT.................................................................................................................2215.005.00------3.00-------1.00-------------1.00----------
.......................ATTAGTGATGATTTTAAAA................................................................................................................................................................................................................194.000.00----------1.00-----------1.00---1.00-----1.00------
.......................ATTAGTGATGATTTTAAA.................................................................................................................................................................................................................183.000.00---------2.00-----------------------1.00-----
.....................................................................................................................................................................................................................CCCCAAAGCTGGAGCAACTC.................2013.003.00-------------1.00-1.00--------1.00--------------
.......................ATTAGTGATGATTTTAAAC................................................................................................................................................................................................................192.000.00-----2.00---------------------------------
................................................................................................................TTCCAGGGAAAGGTGATCTA......................................................................................................................2012.002.00--------2.00------------------------------
...................................................................................................................CAGGGAAAGGTGATCTATGGA..................................................................................................................2112.002.00---------------------1.00--------1.00--------
...........................................................................................................................................................................................................................AGCTGGAGCAACTCTGGT.............1811.001.00------------1.00--------------------------
.......................................................................................................................................ATAGCCTAACTACGGATTGTTGT............................................................................................2311.001.00-------------------1.00-------------------
...............................................................................................................................................................................................................................GGAGCAACTCTGGTCGTGTAC......2111.001.00---------------------------1.00-----------
..............................................................................................................................................................................................................................TGGAGCAACTCTGGTCGTGTACA.....2311.001.00-----------1.00---------------------------
...................................................................................................................CAGGGAAAGGTGATCTATGGAA.................................................................................................................2211.002.00-----------------1.00---------------------
..................................................................CACCTTTCCTCTACACAT......................................................................................................................................................................181.000.00----------------------------------1.00----
....................................................................................................................AGGGAAAGGTGATCTATA....................................................................................................................181.000.00-------1.00-------------------------------
.................................................................................................................TCCAGGGAAAGGTGATCTATGGA..................................................................................................................2311.001.00-------------------------1.00-------------
...........AAAGACGTGTGAATTCTG.............................................................................................................................................................................................................................181.000.00-----------------------1.00---------------
.................................................................................................................................................................................ATGGTGTTACTGACTTTCCCTAGA.................................................241.000.00-------------------------------1.00-------
........ATAAAAGACGTGTGAATTAGTG............................................................................................................................................................................................................................2211.001.00------------------1.00--------------------
...................................................................ACCTTTCCTCTACACTAATG...................................................................................................................................................................201.000.001.00--------------------------------------
...............................................................................................................................................................................................................................GGAGCAACTCTGGTCGTGTACA.....2211.001.00-------1.00-------------------------------
..................................................................CACCTTTCCTCTACACTAAAG...................................................................................................................................................................211.000.00-1.00-------------------------------------
..........................................................................................................................................................................................................................AAGCTGGAGCAACTC.................1530.330.33-----------------------------------0.33---
................................................................................................................................................................................................................CCTTCCCCCAAAGCTGG.........................1730.330.33------------------------------------0.33--
.....................................................................................................................................................................................................................CCCCAAAGCTGGAGCA.....................1670.290.29--------0.14-----------------------------0.14

Antisense strand
TGTTAATAATAAAAGACGTGTGAATTAGTGATGATTTTCTCTCAGACTCAAACCCAGTTTTCTTTCCACCTTTCCTCTACACTTTGTAGTATTAGTTCCCCTTTTGTTGCTCTTCCAGGGAAAGGTGATCTATGGATAGCCTAACTACGGATTGTTGTGAGATCCTGAATGCTAACCATGGTGTTACTGACTTTCCCTAGGGTCCTATCCTTCCCCCAAAGCTGGAGCAACTCTGGTCGTGTACAAGGAC
.............................................................((.(((.........((((.....))))...(((.((.((((((.(((......))).)))))).)).))).))).))...............................................................................................................
.............................................................62.............................................................................141...........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR343335SRR343337SRR343336SRR189784SRR040011(GSM532896)
G529T. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040008(GSM532893)
G727N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................AACTAATACTACAAAG......................................................................................................................................................... 1656.606.602.601.801.400.400.20--------------------------------0.20-
..................................................................................TTTGTAGTATTAGTTAAG...................................................................................................................................................... 184.000.00-2.00-2.00-----------------------------------
...............................................TCAAACCCAGTTTTCTATA........................................................................................................................................................................................ 191.000.00-------1.00-------------------------------
.................................................................................................................TCCAGGGAAAGGTGATTTT...................................................................................................................... 191.000.00--------------------1.00------------------
.................................................................................................................................................................................................................CTTCCCCCAAAGCTGAAAA...................... 191.000.00-----------------------------1.00---------
..............................................CTCAAACCCAGTTTTGGTG......................................................................................................................................................................................... 191.000.00----------------1.00----------------------
...................................................................ACCTTTCCTCTACACTTC..................................................................................................................................................................... 181.000.00-----1.00---------------------------------
.................................................................................CTTTGTAGTATTAGTTGATG..................................................................................................................................................... 200.400.00----0.40----------------------------------