ID: uc001atv.2_intron_51_0_chr1_12423304_f.5p
GENE: (52)
chr1:12423254-12423503+


(3)
B-CELL
(4)
BRAIN
(16)
BREAST
(14)
CERVIX
(1)
FIBROBLAST
(6)
HEART
(1)
KIDNEY
(4)
LIVER
(3)
OTHER
(24)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
TCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCATATCAACATGAGGTAAGTTTGAGACTCTAAATATAGACAAAAAGGTAGCCCCTGTTTGAGATGCAGTACTGTAATAACAAGCCTTGTGTAAAATGGGCACAAATATTTCTGGCTCAGACAGAGGTCTTAGAACTTGCAAAGTCCAGGGAAGTGTGAGGGGATAATTTGATGGAATAAACTAAAGGAGGTGTTGCCCGTTTTGACCATGGTGT
.........................................................................................(((((((((.((((....)))).......((((..........))))..............)))))))))...........................................................................................
.........................................................................................90....................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR040024(GSM532909)
G613N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040014(GSM532899)
G623N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532929(GSM532929)
G702N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336GSM532871(GSM532871)
G652N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................TGAGATGCAGTACTGTAGCT........................................................................................................................................2056.000.005.003.004.002.001.002.001.00-1.002.001.001.00-1.00-2.00-------1.002.001.001.002.001.002.00---1.00------1.00-1.001.001.001.00----1.001.00---1.001.00-1.00-1.001.001.00--1.00--1.001.00-1.001.00-1.00---
..............................................................................................TGAGATGCAGTACTGTAGCTC.......................................................................................................................................2113.000.003.001.00--1.00-1.00---1.00---1.00--1.00---1.00----------------1.00---------------1.00--------1.00--------------
..............................................................................................TGAGATGCAGTACTGTAGCAA.......................................................................................................................................215.000.00-2.00-1.00---------------------1.00--1.00-------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGC.........................................................................................................................................194.000.001.00---------1.00-1.00------------------1.00----------------------------------------------
..............................................................................................TGAGATGCAGTACTGTCGCT........................................................................................................................................204.000.001.00----------------------1.00------1.00---------------------------------------1.00-------
...................................................................................................TGCAGTACTGTAATAACTGA...................................................................................................................................203.000.00-----1.00-----------------------------1.00-------------1.00----------------------------
.............................................................................................................................................................................................TGTGAGGGGATAATTTGATGGAATAA...................................2613.003.00-------3.00----------------------------------------------------------------------
...GGAGGCTTTGAAGTCGCGA....................................................................................................................................................................................................................................192.000.00------------------2.00-----------------------------------------------------------
..TGGAGGCTTTGAAGTCGGG.....................................................................................................................................................................................................................................192.000.00----------------------------------1.00-----------------------------1.00-------------
..............................................................................................TGAGATGCAGTACTGTGGCT........................................................................................................................................202.000.00------------------------------------------------------------------1.001.00----------
..............................................................................................TGAGATGCAGTACTGTAGCA........................................................................................................................................202.000.00---1.00----------------------------1.00---------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGCTT.......................................................................................................................................212.000.00----1.00---------------1.00---------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGTT........................................................................................................................................202.000.00-----------1.00----------------------------------------------------------------1.00-
..............................................................................................TGAGATGCAGTACTGTAGCTG.......................................................................................................................................212.000.00---------------------1.00--------1.00-----------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAG..........................................................................................................................................182.000.00-----------------------------------------------1.00---------------------------1.00--
...........................................................................................................................................................ACAGAGGTCTTAGAACT..............................................................................1712.002.00----------------------2.00-------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAAA.........................................................................................................................................191.000.00--------------------1.00---------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGCGC.......................................................................................................................................211.000.00--------------1.00---------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTATCT........................................................................................................................................201.000.00-------------------------------------1.00----------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGAT........................................................................................................................................201.000.00------------1.00-----------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGCTA.......................................................................................................................................211.000.00---------------------------------------1.00--------------------------------------
...................................................................................................TGCAGTACTGTAATAACT.....................................................................................................................................181.000.00----------------1.00-------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGAAA.......................................................................................................................................211.000.00------------------------------------------------1.00-----------------------------
..............................................................................................TGAGATGCAGTACTGTAAAGA.......................................................................................................................................211.000.00-----------------1.00------------------------------------------------------------
...........................................................................................................................................................ACAGAGGTCTTAGAACTTGC...........................................................................2011.001.00-------------------------------------------------------------------------1.00----
...................................................................................................TGCAGTACTGTAATAACTGAA..................................................................................................................................211.000.00-----------------------------------------------------------1.00------------------
...............................................................................................................................................................AGGTCTTAGAACTTGCAAAGTCCAGGG................................................................2711.001.00------------------------------------1.00-----------------------------------------
..............................................................................................TGAGATGCAGTACTGTCAA.........................................................................................................................................191.000.00-------------------1.00----------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTACCCC.......................................................................................................................................211.000.00----1.00-------------------------------------------------------------------------
...................................................................................................TGCAGTACTGTAATAGCTG....................................................................................................................................191.000.00----------------1.00-------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTCGC.........................................................................................................................................191.000.00---------1.00--------------------------------------------------------------------
...................................................................................................TGCAGTACTGTAATAACGCA...................................................................................................................................201.000.00--------1.00---------------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTTAAA........................................................................................................................................201.000.001.00-----------------------------------------------------------------------------
...GGAGGCTTTGAAGTCGC......................................................................................................................................................................................................................................171.000.00----------------------------------------------------1.00-------------------------
..TGGAGGCTTTGAAGTCAACA....................................................................................................................................................................................................................................2011.001.00-----------------------------------------1.00------------------------------------
..............................................................................................TGAGATGCAGTACTGTCA..........................................................................................................................................181.000.00-------------1.00----------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAACTT.......................................................................................................................................211.000.00----------------------------------------------1.00-------------------------------
..............................................................................................TGAGATGCAGTACTGTATCTC.......................................................................................................................................211.000.00------1.00-----------------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTCCCT........................................................................................................................................201.000.00-----------1.00------------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGGAGC.........................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTAGT.........................................................................................................................................191.000.00-----1.00------------------------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGCATC.........................................................................................................................................191.000.00-----------------------------------------------------1.00------------------------
..............................................................................................TGAGATGCAGTACTGTAACT........................................................................................................................................201.000.00---------------------------------------------------------1.00--------------------
..TGGAGGCTTTGAAGTCAAG.....................................................................................................................................................................................................................................191.000.00-------------------1.00----------------------------------------------------------
..............................................................................................TGAGATGCAGTACTGTGGT.........................................................................................................................................191.000.00--------1.00---------------------------------------------------------------------
.CTGGAGGCTTTGAAGT.........................................................................................................................................................................................................................................1680.120.12-----------------------------------------------------------------------------0.12

Antisense strand
TCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCATATCAACATGAGGTAAGTTTGAGACTCTAAATATAGACAAAAAGGTAGCCCCTGTTTGAGATGCAGTACTGTAATAACAAGCCTTGTGTAAAATGGGCACAAATATTTCTGGCTCAGACAGAGGTCTTAGAACTTGCAAAGTCCAGGGAAGTGTGAGGGGATAATTTGATGGAATAAACTAAAGGAGGTGTTGCCCGTTTTGACCATGGTGT
.........................................................................................(((((((((.((((....)))).......((((..........))))..............)))))))))...........................................................................................
.........................................................................................90....................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR040024(GSM532909)
G613N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040014(GSM532899)
G623N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532929(GSM532929)
G702N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336GSM532871(GSM532871)
G652N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
................................................AGGTAAGTTTGAGACTGC........................................................................................................................................................................................ 181.000.00--------------------------1.00---------------------------------------------------