ID: uc001ask.2_intron_3_0_chr1_11718929_f.5p
GENE: (4)
chr1:11718879-11719128+


(1)
B-CELL
(2)
BRAIN
(4)
BREAST
(4)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
LIVER
(2)
OTHER
(3)
SKIN

Sense strand
AGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTGCGTGGGCCTGGGGGACGGGGGCAGAGGCAGATCGTCCAAGGCTGAGGCTGTGGTCAGACGGGGCCTAGGTTCAGATCCAAGCTCTGCACCTTCTCACCTGTGCTTCCAATGCTCTGAGCTTCACTCGCTGTTTCTGTAAAATGGGTATATAGTGTTTCCCTCATAGAGCTCTGAAAGAAATCAGTGAAATGATGCTG
............................................................((((.((((((..((....))...))))))..(((....)))....))))............................................................................................................................................
...........................................................60....................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040034(GSM532919)
G001N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
..........................................................................................AAGGCTGAGGCTGTGGGTTC............................................................................................................................................2054.000.0052.00-2.00----------------------
........................................................................................CCAAGGCTGAGGCTGTGGGTTC............................................................................................................................................222.000.002.00------------------------
..........................................................................................AAGGCTGAGGCTGTGGGT..............................................................................................................................................182.000.001.00-----1.00------------------
..........................................................................................AAGGCTGAGGCTGTGGGTT.............................................................................................................................................192.000.002.00------------------------
..........................................................................................AAGGCTGAGGCTGTGGGTTA............................................................................................................................................202.000.002.00------------------------
..........................................................................................AAGGCTGAGGCTGTGGGGTC............................................................................................................................................202.000.001.00-1.00----------------------
.......................CAGAAGAGCGATGCCAAGTGGAGG...........................................................................................................................................................................................................2411.001.00-1.00-----------------------
...........................................................................................AGGCTGAGGCTGTGGTCAGACG.........................................................................................................................................2211.001.00-1.00-----------------------
..........GGCGACCATCCAGCAGAAGAGCGATGCC....................................................................................................................................................................................................................2811.001.00-1.00-----------------------
........................AGAAGAGCGATGCCAAGTGGAGG...........................................................................................................................................................................................................2311.001.00-------1.00-----------------
.................................ATGCCAAGTGGAGGGAGGTC.....................................................................................................................................................................................................201.000.00---------------1.00---------
.............................................................................AGGCAGATCGTCCAAGGCTG.........................................................................................................................................................2011.001.00----------1.00--------------
...........................................................................................AGGCTGAGGCTGTGGTCAGACGGG.......................................................................................................................................2411.001.00-1.00-----------------------
..........................................................................................AAGGCTGAGGCTGTGGGTA.............................................................................................................................................191.000.001.00------------------------
.......................................................................................................................................................................................................................ATAGAGCTCTGAAAGAAATCAGT............2311.001.00----------------1.00--------
................................................................GGGACGGGGGCAGAGTGG........................................................................................................................................................................181.000.001.00------------------------
.......................CAGAAGAGCGATGCC....................................................................................................................................................................................................................1511.001.00--------------1.00----------
..........................................................................................AAGGCTGAGGCTGTGGG...............................................................................................................................................171.000.00------1.00------------------
..........................................................................................AAGGCTGAGGCTGTGGGTTT............................................................................................................................................201.000.001.00------------------------
.........................GAAGAGCGATGCCAAGTGGAGGGAG........................................................................................................................................................................................................2511.001.00---1.00---------------------
..............................................................................................................................................................................CACTCGCTGTTTCTGTAAAATGGGTATA................................................2811.001.00--1.00----------------------
...........................................................................................................................................................................................................AGTGTTTCCCTCATAGAG.............................1811.001.00----1.00--------------------
..................TCCAGCAGAAGAGCGATGC.....................................................................................................................................................................................................................1911.001.00---1.00---------------------
.............................................................................................GCTGAGGCTGTGGTCGA............................................................................................................................................171.000.00-----1.00-------------------
.........CGGCGACCATCCAGCAGAAGAGCGA........................................................................................................................................................................................................................2511.001.00---------------------1.00---
....................CAGCAGAAGAGCGATGC.....................................................................................................................................................................................................................1711.001.00---1.00---------------------
..............................................................................................................................................................................................................GTTTCCCTCATAGAGCTCTGAAAGAAA.................2711.001.00----1.00--------------------
.................ATCCAGCAGAAGAGCGATGC.....................................................................................................................................................................................................................2011.001.00----------------------1.00--
........................AGAAGAGCGATGCCAA..................................................................................................................................................................................................................1620.500.50-----------------------0.50-
.....................................CAAGTGGAGGGAGGTGC....................................................................................................................................................................................................1730.330.33------------------------0.33
...................................................................................................................................................................................................................CCTCATAGAGCTCTG........................1580.120.12-------0.12-----------------

Antisense strand
AGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTGCGTGGGCCTGGGGGACGGGGGCAGAGGCAGATCGTCCAAGGCTGAGGCTGTGGTCAGACGGGGCCTAGGTTCAGATCCAAGCTCTGCACCTTCTCACCTGTGCTTCCAATGCTCTGAGCTTCACTCGCTGTTTCTGTAAAATGGGTATATAGTGTTTCCCTCATAGAGCTCTGAAAGAAATCAGTGAAATGATGCTG
............................................................((((.((((((..((....))...))))))..(((....)))....))))............................................................................................................................................
...........................................................60....................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040034(GSM532919)
G001N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
.....................AGCAGAAGAGCGATGATG................................................................................................................................................................................................................... 181.000.00-----------1.00-------------
.............................................................................................................................................CCTTCTCACCTGTGCTACGG......................................................................................... 201.000.00------------------1.00------
......................................................................................................................................................CTGTGCTTCCAATGCTAGT................................................................................. 191.000.00---------1.00---------------
........................................................GGGCCTGGGGGACGGGGGATG............................................................................................................................................................................. 211.000.00-----------------1.00-------
.............................................................................................................................................................TCCAATGCTCTGAGCGGC........................................................................... 181.000.00--------1.00----------------
............................................................................................................................................................................TTCACTCGCTGTTTCTCA............................................................ 181.000.00-------------------1.00-----
.....................................................................................................................................................................TCTGAGCTTCACTCGCTGGA................................................................. 201.000.00-------------1.00-----------
..................................................................................................................GGCCTAGGTTCAGATACT...................................................................................................................... 181.000.00-----1.00-------------------
.....................................................CGTGGGCCTGGGGGAATC................................................................................................................................................................................... 181.000.00--------------------1.00----
.....................................................................................................................................................................................................................TCATAGAGCTCTGAAACGA.................. 191.000.00------------1.00------------