ID: uc001ase.2_intron_2_0_chr1_11253832_f.5p
GENE: (3)
chr1:11253782-11254031+


(1)
AGO1.ip 		(2)
AGO2.ip 		(13)
BREAST 		(9)
CELL-LINE 		(1)
HEART 		(1)
KIDNEY 		(1)
OTHER

Sense strand
ACATCCACCGGCTCTCCAGACAGCCAACCCGGCTGCGTGTAGAGATGGAGGTAAGCACAAGGCCAGGGGCCCCATGACTGGACCAGTGCCACCACACATGACCGCGTACAACTCCGGGGGTGCCATTCCTATTCTGATTCAAGACAAATCTGTATATTCATTGTGATGGTTTTCCTGCAAGTTGTAATGGAGTTGAGGAAAAATAGGTATTTTTCCTTTCTGCAACCCCCCCAACCCCCCGACAAAAGTG
......................................................((((..((((((...........)))).)).))))..((.((.((..(((..(((((((.((((((.((((((...((..(((......(((....)))....)))..)))))))).))))))..))))))).))).)))).))....................................................
..................................................51........................................................................................................................................................205...........................................
SizePerfect hitTotal NormPerfect NormTAX577740(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR343334SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................AGCACAAGGCCAGGGATTT..................................................................................................................................................................................1914.000.004.003.004.00--2.00---1.00-----------------
.....................................................AGCACAAGGCCAGGGATTA..................................................................................................................................................................................198.000.003.002.003.00------------------------
.....................................................AGCACAAGGCCAGGGATT...................................................................................................................................................................................188.000.002.001.001.00-1.002.00------1.00--------------
.........................................................................................................................................................................................AATGGAGTTGAGGAAATAT..............................................196.000.00------2.002.001.00--1.00---------------
.....................................................AGCACAAGGCCAGGGAATA..................................................................................................................................................................................195.000.004.00----------------1.00---------
.....................................................AGCACAAGGCCAGGGAAT...................................................................................................................................................................................184.000.004.00--------------------------
.....................................................AGCACAAGGCCAGGGAATT..................................................................................................................................................................................193.000.001.00---2.00----------------------
.....................................................AGCACAAGGCCAGGGAGTT..................................................................................................................................................................................193.000.001.002.00-------------------------
.....................................................AGCACAAGGCCAGGGTTTT..................................................................................................................................................................................192.000.00----2.00----------------------
.....................................................AGCACAAGGCCAGGGAGTA..................................................................................................................................................................................192.000.001.001.00-------------------------
.....................................................AGCACAAGGCCAGGGACTA..................................................................................................................................................................................192.000.002.00--------------------------
.........................................................................................................................................................................................AATGGAGTTGAGGAAATATT.............................................202.000.00------1.00-1.00------------------
......ACCGGCTCTCCAGACAGC..................................................................................................................................................................................................................................1811.001.00---------------------1.00-----
.....................................................AGCACAAGGCCAGGGTATA..................................................................................................................................................................................191.000.00-1.00-------------------------
.....................................................AGCACAAGGCCAGGGAATG..................................................................................................................................................................................191.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGTAT...................................................................................................................................................................................181.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGCTTG..................................................................................................................................................................................191.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGCTTT..................................................................................................................................................................................191.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGGGTTA.................................................................................................................................................................................201.000.00----1.00----------------------
.....................................................AGCACAAGGCCAGGGCTT...................................................................................................................................................................................181.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGGTTTC.................................................................................................................................................................................201.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGAAA...................................................................................................................................................................................181.000.00-1.00-------------------------
...................................................................GGCCCCATGACTGGAG.......................................................................................................................................................................161.000.00--------------1.00------------
.........................................................................................................................................................................................................................TTCTGCAACCCCCCCAACCTGT...........221.000.00--------------------1.00------
.....................................................AGCACAAGGCCAGGGTA....................................................................................................................................................................................171.000.001.00--------------------------
.......................................................CACAAGGCCAGGGGCTTTC................................................................................................................................................................................191.000.00----------1.00----------------
.....................................................AGCACAAGGCCAGGGAGT...................................................................................................................................................................................181.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGTTCC..................................................................................................................................................................................191.000.00-1.00-------------------------
.....................................................AGCACAAGGCCAGGGAAAA..................................................................................................................................................................................191.000.00--1.00------------------------
.....................................................AGCACAAGGCCAGGGATC...................................................................................................................................................................................181.000.00-1.00-------------------------
.....................................................AGCACAAGGCCAGGGATTG..................................................................................................................................................................................191.000.001.00--------------------------
.....................................................AGCACAAGGCCAGGGTGTG..................................................................................................................................................................................191.000.00-1.00-------------------------
.................................................................................................................................................................................................................................CCCCCCCAACCCCCCGGCA......191.000.00----------------1.00----------
.....................................................AGCACAAGGCCAGGGTTTA..................................................................................................................................................................................191.000.00--1.00------------------------
.....................................................AGCACAAGGCCAGGGGTTAC.................................................................................................................................................................................201.000.00------------------------1.00--
.....................................................AGCACAAGGCCAGGGATCA..................................................................................................................................................................................191.000.00-------------------1.00-------
.....................................................AGCACAAGGCCAGGGGGTT..................................................................................................................................................................................191.000.00---------1.00-----------------
.....................................................AGCACAAGGCCAGGGAACA..................................................................................................................................................................................191.000.00-1.00-------------------------
.....................................................AGCACAAGGCCAGGGATTC..................................................................................................................................................................................191.000.001.00--------------------------
.........................................................................................................................................................................................AATGGAGTTGAGGAAATCTT.............................................201.000.00---------------1.00-----------
.....................................................AGCACAAGGCCAGGGGTTT..................................................................................................................................................................................191.000.00--1.00------------------------

Antisense strand
ACATCCACCGGCTCTCCAGACAGCCAACCCGGCTGCGTGTAGAGATGGAGGTAAGCACAAGGCCAGGGGCCCCATGACTGGACCAGTGCCACCACACATGACCGCGTACAACTCCGGGGGTGCCATTCCTATTCTGATTCAAGACAAATCTGTATATTCATTGTGATGGTTTTCCTGCAAGTTGTAATGGAGTTGAGGAAAAATAGGTATTTTTCCTTTCTGCAACCCCCCCAACCCCCCGACAAAAGTG
......................................................((((..((((((...........)))).)).))))..((.((.((..(((..(((((((.((((((.((((((...((..(((......(((....)))....)))..)))))))).))))))..))))))).))).)))).))....................................................
..................................................51........................................................................................................................................................205...........................................
SizePerfect hitTotal NormPerfect NormTAX577740(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR343334SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........CGGGTTGGCTGTCTGGAGAG........................................................................................................................................................................................................................... 2018.008.00---8.00-----------------------
.......................................................................................................................................................................................................................CTTTCTGCAACCCCCCCACCA.............. 211.000.00----------------------1.00----
......................................................................................................................................................................................................................CCTTTCTGCAACCCCCCCCAA............... 211.000.00------------------1.00--------
..........................................................................................................................................................................................................................................ACTTTTGTCGGGGGG. 1511.001.00-----------------------1.00---
..................................................................................................................................................................................................................................CCCCCCAACCCCCCGTCGA..... 191.000.00-------------1.00-------------
.................................................................................................................................................................................................................................GTCGGGGGGTTGGGGGGG....... 1860.170.17-------------------------0.17-
...............................................................................................................ATGGCACCCCCGGAG............................................................................................................................ 1580.120.12--------------------------0.12