ID: uc001arj.2_intron_0_0_chr1_10521760_r.5p
GENE: (5)
chr1:10522915-10523164-


(2)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(10)
CELL-LINE 		(7)
HEART 		(1)
HELA 		(3)
LIVER 		(1)
OTHER 		(21)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TGAGGGAGAAGCAGGCTCCAGAGCTGAGCTTATCTAGTCAGGATTTGGAGGTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTAGTATCATGCAGAGGTGTGTGGGCCCTTTTGTTCACCTCTGCAGACTGTGAATCCTAGCTGCCAGTTTGCCTATTATATGCCAAGGCATTTGCAAAAATCTCATTAATCTAAATCAAAATAGCTTTAAAGAAAAATGCATACAC
......................................................(((....(((((((.......((.....)).......)))))))..)))...................................................................................................................................................
..................................................51........................................................109...........................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................GTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTAGTATCATGCAGAG..................................................................................................................................7018.008.008.00-----------------------------------------------------------
.................................................GGTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTA...............................................................................................................................................5814.004.004.00-----------------------------------------------------------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCTCTTG.................................................................................................................283.000.00-3.00----------------------------------------------------------
............................................................................................................TATCATGCAGAGGTGTGTGGGCCCTTTTG.................................................................................................................2913.003.00-1.00-1.00--1.00-----------------------------------------------------
..............................................GGAGGTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTAGTATCATGCAGAGGTGTGT............................................................................................................................8013.003.003.00-----------------------------------------------------------
............................................................................................................TATCATGCAGAGGTGTGTGGGCCCTTTCG.................................................................................................................293.000.00---3.00--------------------------------------------------------
.............................................TGGAGGTGGGCGGAAACCAGGGTCACTGAGCC.............................................................................................................................................................................322.000.00--1.00----1.00----------------------------------------------------
............................CTTATCTAGTCAGGATTTGGA.........................................................................................................................................................................................................2112.002.00--------2.00---------------------------------------------------
.......................................................................................ACATGCCCTGGGATGTAG.................................................................................................................................................1812.002.00--2.00---------------------------------------------------------
..............................TATCTAGTCAGGATTTGGAGGTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTAGTATCATGCAGAGGTGTGTGGGCC.......................................................................................................................10112.002.002.00-----------------------------------------------------------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCTT....................................................................................................................2512.002.00-2.00----------------------------------------------------------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCCTT...................................................................................................................262.000.00-2.00----------------------------------------------------------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCTTTG..................................................................................................................272.000.00-2.00----------------------------------------------------------
...............................................................AGGGTCACTGAGCTACAGAGGAGGA..................................................................................................................................................................2512.002.00------------------2.00-----------------------------------------
..........................................ATTTGGAGGTGGGCGGAA..............................................................................................................................................................................................1811.001.00--------1.00---------------------------------------------------
....................................................................................AGGACATGCCCTGGGATGTAG.................................................................................................................................................2111.001.00--------------------------------------1.00---------------------
......................................CAGGATTTGGAGGTGGGCGGAAACC...........................................................................................................................................................................................2511.001.00----------1.00-------------------------------------------------
............................................................ACCAGGGTCACTGAGCTACAGAGGAGGACGCCC.............................................................................................................................................................3311.001.00--1.00---------------------------------------------------------
.............................................TGGAGGTGGGCGGAAACCAGGGTCACTG.................................................................................................................................................................................2811.001.00--1.00---------------------------------------------------------
.............................TTATCTAGTCAGGATTTGGAGT.......................................................................................................................................................................................................221.000.00---------------------------------------------------1.00--------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCTTTC..................................................................................................................271.000.00-1.00----------------------------------------------------------
.......................................................................................................................................................................................................AAAAATCTCATTAATCTAAATC.............................2211.001.00-----------------------------1.00------------------------------
.............................................................................ACAGAGGAGGACATGCCCTGGGACGT...................................................................................................................................................261.000.00--------------------------------1.00---------------------------
...................................................................................GAGGACATGCCCTGGGATGTAGTAGC.............................................................................................................................................261.000.00--1.00---------------------------------------------------------
.............................................................................................................................TGGGCCCTTTTGTTCACCTCTGCAGAC..................................................................................................2711.001.00--1.00---------------------------------------------------------
......................................CAGGATTTGGAGGTGGGCGGA...............................................................................................................................................................................................2111.001.00----------1.00-------------------------------------------------
......................................................................................................................................................................................................CAAAAATCTCATTAATCTAAATCAAAATAG......................3011.001.00---1.00--------------------------------------------------------
..AGGGAGAAGCAGGCTCCAGAGCTGAGCC............................................................................................................................................................................................................................281.000.00--1.00---------------------------------------------------------
.........AGCAGGCTCCAGAGCTGAGCTT...........................................................................................................................................................................................................................2211.001.00----------------------------------------1.00-------------------
....................................................................................................................................................AGACTGTGAATCCTAGCTGCCA................................................................................2211.001.00-----------------1.00------------------------------------------
...............................................................................................................................................TCTGCAGACTGTGAATCTG........................................................................................191.000.00---------------------------------1.00--------------------------
............................................................................................................TATCATGCAGAGGTGTGTGGGCCCTTCTG.................................................................................................................291.000.00-1.00----------------------------------------------------------
..............................................................................................................TCATGCAGAGGTGTGTGG..........................................................................................................................1811.001.00-----------------------------------1.00------------------------
...................................AGTCAGGATTTGGAGGTGGG...................................................................................................................................................................................................2011.001.00---------------------------------------1.00--------------------
..AGGGAGAAGCAGGCTCCAGAG...................................................................................................................................................................................................................................2111.001.00-------------------------------------------------1.00----------
............................................................................................................................................................................................................TCTCATTAATCTAAAATTG...........................191.000.00-1.00----------------------------------------------------------
.................................................................................................................................CCCTTTTGTTCACCTCTGCAG....................................................................................................2111.001.00---------------------------------------------1.00--------------
...............................................................................AGAGGAGGACATGCCCTGGGTCG....................................................................................................................................................231.000.00--1.00---------------------------------------------------------
............................................................................................................TATCATGCAGAGGTGTGTGGGCCCTTG...................................................................................................................271.000.00---1.00--------------------------------------------------------
.............................................................................................................ATCATGCAGAGGTGTGTGGGCCCTTTCG.................................................................................................................281.000.00-1.00----------------------------------------------------------
..................................................GTGGGCGGAAACCAGGGTCACTGAT...............................................................................................................................................................................251.000.00------------------------------------1.00-----------------------
............................................................ACCAGGGTCACTGAGCTACAGAGGAGGAC.................................................................................................................................................................2911.001.00-------1.00----------------------------------------------------
...............................................................................................TGGGATGTAGTAGTATCATGCAGAGG.................................................................................................................................2611.001.00-------------------------------------------1.00----------------
............................................................................................CCCTGGGATGTAGTAGTATCATG.......................................................................................................................................2311.001.00------------------------------1.00-----------------------------
....................................GTCAGGATTTGGAGGTGGGCGGA...............................................................................................................................................................................................2311.001.00--------------------------1.00---------------------------------
.................................................................................AGGAGGACATGCCCTGGGATGTAGTAGC.............................................................................................................................................281.000.00--1.00---------------------------------------------------------
.................................CTAGTCAGGATTTGGAGGT......................................................................................................................................................................................................1911.001.00--------------------------------------------1.00---------------
.........................................................................................................................................TTCACCTCTGCAGACTGTGAATCCTAGCCG...................................................................................301.000.00-----------------------1.00------------------------------------
..AGGGAGAAGCAGGCTCCAGAGCCGA...............................................................................................................................................................................................................................251.000.00-----------------------1.00------------------------------------
.....................................................................ACTGAGCTACAGAGGAGGACATGCCCTGGG.......................................................................................................................................................3011.001.00--1.00---------------------------------------------------------
.....................................................................ACTGAGCTACAGAGGAGGACATGCCCTGGGAC.....................................................................................................................................................321.000.00--1.00---------------------------------------------------------
.............................................................................ACAGAGGAGGACATGCCCTGGGATGTAGCAG..............................................................................................................................................311.000.00-------1.00----------------------------------------------------
..............................................................................................................TCATGCAGAGGTGTGTGGGCCCTTTCG.................................................................................................................271.000.00-1.00----------------------------------------------------------
................................................................................................GGGATGTAGTAGTATCATGCAGAG..................................................................................................................................2411.001.00----------------------------------------------1.00-------------
.............................................................................ACAGAGGAGGACATGCCCTGGGATGCAGT................................................................................................................................................291.000.00--1.00---------------------------------------------------------
.....................................................................................................GTAGTAGTATCATGC......................................................................................................................................1550.200.20-----------------------------------------------------------0.20

Antisense strand
TGAGGGAGAAGCAGGCTCCAGAGCTGAGCTTATCTAGTCAGGATTTGGAGGTGGGCGGAAACCAGGGTCACTGAGCTACAGAGGAGGACATGCCCTGGGATGTAGTAGTATCATGCAGAGGTGTGTGGGCCCTTTTGTTCACCTCTGCAGACTGTGAATCCTAGCTGCCAGTTTGCCTATTATATGCCAAGGCATTTGCAAAAATCTCATTAATCTAAATCAAAATAGCTTTAAAGAAAAATGCATACAC
......................................................(((....(((((((.......((.....)).......)))))))..)))...................................................................................................................................................
..................................................51........................................................109...........................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................CTGAGCTACAGAGGACGG.................................................................................................................................................................. 1813.000.00----1.002.00-----2.00-2.00-1.002.00----------1.00---1.00----------1.00-----------------
......................................................................CTGAGCTACAGAGGACTGG................................................................................................................................................................. 1911.000.00----1.00---------1.00-----2.002.001.00-1.00---1.00------------1.00-----1.00------------
......................................................................CTGAGCTACAGAGGACG................................................................................................................................................................... 173.000.00-----1.00---------1.00-1.00------------------------------------------
.....................................................................ACTGAGCTACAGAGGACGG.................................................................................................................................................................. 193.000.00---0.20----------------------0.200.20---------1.00--------------0.200.200.200.200.200.200.20-
......................................................................CTGAGCTACAGAGGACGGT................................................................................................................................................................. 193.000.00---------3.00--------------------------------------------------
....................................................................CACTGAGCTACAGAGGAG.................................................................................................................................................................... 182.000.00----------------------1.00-----------1.00-------------------------
....................................................................CACTGAGCTACAGAGGAGTA.................................................................................................................................................................. 202.000.00------------2.00-----------------------------------------------
..................................................................................................................................................................................................................TAATCTAAATCAAAACG....................... 171.000.00------1.00-----------------------------------------------------
....................................................................CACTGAGCTACAGAGGGG.................................................................................................................................................................... 181.000.00----1.00-------------------------------------------------------
......................................................................CTGAGCTACAGAGGACTG.................................................................................................................................................................. 181.000.00--------------1.00---------------------------------------------
..........................................................................................................................................................................................................AATCTCATTAATCTAACCAG............................ 201.000.00------1.00-----------------------------------------------------
......................................................................CTGAGCTACAGAGGACATC................................................................................................................................................................. 191.000.00-------------------------1.00----------------------------------
.....................................................................ACTGAGCTACAGAGGATGG.................................................................................................................................................................. 190.400.00------------------------0.40-----------------------------------
.....................................................................TCCTCTGTAGCTCAGT..................................................................................................................................................................... 1650.200.20-------------------------0.20----------------------------------