ID: uc001apj.1_intron_10_0_chr1_8934977_r.5p
GENE: (1)
chr1:8938439-8938688-


(1)
AGO2.ip 		(5)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(28)
CELL-LINE 		(4)
CERVIX 		(3)
HEART 		(4)
HELA 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(23)
SKIN 		(1)
XRN.ip

Sense strand
TCTGCAGCACCCTCCGCTTCCTCTCCTAGGCGACGAGACCCAGTGGCTAGGTAATGATTGGGGAAGGGCTGAGCAACGGGCAGGCGGCGCAGGGCTTTTCTGGGCTTGTGGGGCTCTTTTCCCTCCGAGGGAGGCGGCGCGCCCGCAGGCCCAGCGTGGCGGGGTCGGGGGCACGTGCAAGCCGCCTCCCTGGGTGGGAACTGGCGCCCCCGCTCACCCCGAGGCCCGGGGCGGGGGCGCAATGCCAGGC
..............................................................................((.((((((((((..(((...(((((((((((((((.((((((((.....)))))).)).)).)))))))))))))...)))...((.....))...)))..))))))))).............................................................
..............................................................63............................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029128(GSM416757)
H520. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
...................................................................GCTGAGCAACGGGCAGGCGG...................................................................................................................................................................2014.004.00--4.00-------------------------------------------------------------------------------
............................GGCGACGAGACCCAGTGGATC.........................................................................................................................................................................................................214.000.00-----4.00----------------------------------------------------------------------------
..................................................GTAATGATTGGGGAAAA.......................................................................................................................................................................................174.000.004.00---------------------------------------------------------------------------------
..............................CGACGAGACCCAGTGGC...........................................................................................................................................................................................................1714.004.00----2.00----------1.00-------------------------1.00----------------------------------------
................................ACGAGACCCAGTGGCTAGGT......................................................................................................................................................................................................2013.003.00-------3.00--------------------------------------------------------------------------
................................................................AGGGCTGAGCAACGGGCAG.......................................................................................................................................................................1913.003.00----3.00-----------------------------------------------------------------------------
...............................................................AAGGGCTGAGCAACGGGCAGG......................................................................................................................................................................2113.003.003.00---------------------------------------------------------------------------------
......................CTCCTAGGCGACGAGACCCAGTGGCT..........................................................................................................................................................................................................2613.003.00-----------------1.00------------------------------------1.00---1.00-----------------------
.....................................................ATGATTGGGGAAGGGCTGAGCA...............................................................................................................................................................................2212.002.00------2.00---------------------------------------------------------------------------
..................................................GTAATGATTGGGGAAGGGCTGAGC................................................................................................................................................................................2412.002.00-------------2.00--------------------------------------------------------------------
.......CACCCTCCGCTTCCTCTCCTAGGCGACGAGACCCAG...............................................................................................................................................................................................................3612.002.00---------------------------------1.00-----------------------------------1.00------------
..................................................GTAATGATTGGGGAAAG.......................................................................................................................................................................................172.000.002.00---------------------------------------------------------------------------------
....................................................................................................................................................................TCGGGGGCACGTGCAAGCCGC.................................................................2112.002.00---------2.00------------------------------------------------------------------------
......................CTCCTAGGCGACGAGACCCA................................................................................................................................................................................................................2012.002.00--------------------------------------------1.00-1.00-----------------------------------
.CTGCAGCACCCTCCGCTTCCTCCCC................................................................................................................................................................................................................................252.000.00-2.00--------------------------------------------------------------------------------
........................................................................................................................................................AGCGTGGCGGGGTCGAAA................................................................................182.000.00--------------------2.00-------------------------------------------------------------
................................ACGAGACCCAGTGGCTAG........................................................................................................................................................................................................1812.002.00-----------------------1.00-------------------------------------------1.00--------------
...............................................................AAGGGCTGAGCAACGGGC.........................................................................................................................................................................1812.002.00-----------------------------------1.00-------------------1.00--------------------------
...........................................TGGCTAGGTAATGATTGGGGAAGGG......................................................................................................................................................................................2512.002.00--2.00-------------------------------------------------------------------------------
..........................................GTGGCTAGGTAATGATTGGGGAAG........................................................................................................................................................................................2412.002.00-----------2.00----------------------------------------------------------------------
................................................................AGGGCTGAGCAACGGGCAGGCGGC..................................................................................................................................................................2412.002.00----------1.00-------------------1.00---------------------------------------------------
...........................AGGCGACGAGACCCAGTGGCT..........................................................................................................................................................................................................2112.002.00---2.00------------------------------------------------------------------------------
...........................AGGCGACGAGACCCAG...............................................................................................................................................................................................................1612.002.00----------------------------------------1.00----1.00------------------------------------
..............................CGACGAGACCCAGTGGCTA.........................................................................................................................................................................................................1912.002.00------------------------2.00---------------------------------------------------------
........................................................ATTGGGGAAGGGCTGAGCAACGG...........................................................................................................................................................................2311.001.00---------------------------------------------------1.00------------------------------
................................................AGGTAATGATTGGGGAAGG.......................................................................................................................................................................................1911.001.00----------------1.00-----------------------------------------------------------------
.....................TCTCCTAGGCGACGAGACCCA................................................................................................................................................................................................................2111.001.00--------1.00-------------------------------------------------------------------------
................................................................AGGGCTGAGCAACGGGCAGG......................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------
..................................................................................................................................................................................AAGCCGCCTCCCTGGGTGGGA...................................................2111.001.00-------------------------------------1.00--------------------------------------------
.......................TCCTAGGCGACGAGACCCAGTGGC...........................................................................................................................................................................................................2411.001.00------------1.00---------------------------------------------------------------------
..............................CGACGAGACCCAGTGGCTAGACGT....................................................................................................................................................................................................2411.001.00------------1.00---------------------------------------------------------------------
................................ACGAGACCCAGTGGCTAGCAGT....................................................................................................................................................................................................2211.002.00-----------------------------------------------------1.00----------------------------
.............CCGCTTCCTCTCCTAGGCGACGAG.....................................................................................................................................................................................................................2411.001.00-----------1.00----------------------------------------------------------------------
................................ACGAGACCCAGTGGCTAGAA......................................................................................................................................................................................................2011.002.00--------------------------------------1.00-------------------------------------------
..............................CGACGAGACCCAGTGGCTAG........................................................................................................................................................................................................2011.001.00-----------------------1.00----------------------------------------------------------
....................CTCTCCTAGGCGACGAGACCCAGTG.............................................................................................................................................................................................................2511.001.00--------------------------1.00-------------------------------------------------------
.................TTCCTCTCCTAGGCGACGAGAC...................................................................................................................................................................................................................2211.001.00---------------------------------------1.00------------------------------------------
..............................................................................................................................................................................................................CCCCCGCTCACCCCGAA...........................171.000.00----------------------------------------------------1.00-----------------------------
...........................AGGCGACGAGACCCAGTG.............................................................................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------
...........................................................................ACGGGCAGGCGGCGCAGGGCTTTTCTGGGCCCG..............................................................................................................................................331.000.00-1.00--------------------------------------------------------------------------------
....................CTCTCCTAGGCGACGAGACCCAGT..............................................................................................................................................................................................................2411.001.00------------------1.00---------------------------------------------------------------
....................................................AATGATTGGGGAAGGGCTGA..................................................................................................................................................................................2011.001.00--------------------------------------------------------------1.00-------------------
..TGCAGCACCCTCCGCTTCCTC...................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------1.00----------
...GCAGCACCCTCCGCTTCCTCTCCTA..............................................................................................................................................................................................................................2511.001.00--------------1.00-------------------------------------------------------------------
...........................................................GGGGAAGGGCTGAGCAA..............................................................................................................................................................................1721.001.00-----------------------------------------------1.00----------------------------------
...............................................................................GCAGGCGGCGCAGGGCCGG........................................................................................................................................................191.000.00---1.00------------------------------------------------------------------------------
........................CCTAGGCGACGAGACCCAGTGGCTAG........................................................................................................................................................................................................2611.001.00-1.00--------------------------------------------------------------------------------
................CTTCCTCTCCTAGGCGACA.......................................................................................................................................................................................................................191.000.00-------------------1.00--------------------------------------------------------------
.........................CTAGGCGACGAGACCCAGTGGC...........................................................................................................................................................................................................2211.001.00---------------------------1.00------------------------------------------------------
..TGCAGCACCCTCCGCTTCCTCTC.................................................................................................................................................................................................................................2311.001.00------------------------------------------------------------------1.00---------------
...........................AGGCGACGAGACCCAGTGG............................................................................................................................................................................................................1911.001.00---1.00------------------------------------------------------------------------------
................................ACGAGACCCAGTGGC...........................................................................................................................................................................................................1511.001.00--------------1.00-------------------------------------------------------------------
..................TCCTCTCCTAGGCGACGAGAC...................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00----------------------
............TCCGCTTCCTCTCCTAGGCG..........................................................................................................................................................................................................................2011.001.00---------------------1.00------------------------------------------------------------
...................................................................GCTGAGCAACGGGCAGGCGGC..................................................................................................................................................................2111.001.00---------------------------------------------------------1.00------------------------
.........................CTAGGCGACGAGACCCAGTGGCTAGAA......................................................................................................................................................................................................271.000.001.00---------------------------------------------------------------------------------
................................................................AGGGCTGAGCAACGGGCAGGCGGCGCAGGGCTC.........................................................................................................................................................331.000.00-1.00--------------------------------------------------------------------------------
..........................................................TGGGGAAGGGCTGAG.................................................................................................................................................................................1501.001.00----------------1.00-----------------------------------------------------------------
..........................TAGGCGACGAGACCCAGTA.............................................................................................................................................................................................................191.000.00-------------------------------1.00--------------------------------------------------
..............................................................GAAGGGCTGAGCAACGGGC.........................................................................................................................................................................1911.001.00----------------------------------------------------------------1.00-----------------
....................CTCTCCTAGGCGACGAGACCCA................................................................................................................................................................................................................2211.001.00----------------------------------1.00-----------------------------------------------
......................CTCCTAGGCGACGAGACCC.................................................................................................................................................................................................................1911.001.00-----------------------------1.00----------------------------------------------------
................................ACGAGACCCAGTGGCTAGAAG.....................................................................................................................................................................................................2111.002.00---1.00------------------------------------------------------------------------------
......................................................................................................................................................CCAGCGTGGCGGGGTGGG..................................................................................181.000.00------------------------------------1.00---------------------------------------------
.............................................................................GGGCAGGCGGCGCAGGGCTTT........................................................................................................................................................2111.001.00-------------------------------------------------1.00--------------------------------
...............................GACGAGACCCAGTGGCTAGA.......................................................................................................................................................................................................2011.001.00--------------------------------------------------1.00-------------------------------
....................................................................................................TGGGCTTGTGGGGCTCTTTTCCC...............................................................................................................................2311.001.00-------------1.00--------------------------------------------------------------------
..........................................................................AACGGGCAGGCGGCGCAGGGCTTTC.......................................................................................................................................................251.000.00------1.00---------------------------------------------------------------------------
..............................................................GAAGGGCTGAGCAACGGGCAG.......................................................................................................................................................................2111.001.00---------------------------------------------------------------1.00------------------
...................CCTCTCCTAGGCGACGAGACC..................................................................................................................................................................................................................2111.001.00----------1.00-----------------------------------------------------------------------
............................GGCGACGAGACCCAGTGGCT..........................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00-------------
...............................GACGAGACCCAGTGGCTAG........................................................................................................................................................................................................1911.001.00------------------1.00---------------------------------------------------------------
........................................................ATTGGGGAAGGGCTGAGCAACGGG..........................................................................................................................................................................2411.001.00--1.00-------------------------------------------------------------------------------
......................CTCCTAGGCGACGAGACCCAGT..............................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00--------------------
..................................................GTAATGATTGGGGAAGGG......................................................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------
.....AGCACCCTCCGCTTCCTC...................................................................................................................................................................................................................................1811.001.00-1.00--------------------------------------------------------------------------------
.....................................................ATGATTGGGGAAGGGCTGAGC................................................................................................................................................................................2111.001.00-----------------------------------------------------------------1.00----------------
................................................................AGGGCTGAGCAACGGGCAGGCG....................................................................................................................................................................2211.001.00------------------------------------------------------------------------1.00---------
.................TTCCTCTCCTAGGCGACGAGACCCAG...............................................................................................................................................................................................................2611.001.00-----------------1.00----------------------------------------------------------------
.................................CGAGACCCAGTGGCTAGAAG.....................................................................................................................................................................................................201.000.00----------1.00-----------------------------------------------------------------------
.........................................................TTGGGGAAGGGCTGAGCAA..............................................................................................................................................................................1911.001.00--------------------------------1.00-------------------------------------------------
.......................................................................AGCAACGGGCAGGCGGCGCAGGGCTCCCC......................................................................................................................................................291.000.00------1.00---------------------------------------------------------------------------
........................CCTAGGCGACGAGACCCAG...............................................................................................................................................................................................................1911.001.00--------------1.00-------------------------------------------------------------------
................................ACGAGACCCAGTGGCTGGGG......................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------------------------
....................................................................CTGAGCAACGGGCAGGCGGC..................................................................................................................................................................2011.001.00---------1.00------------------------------------------------------------------------
..................................................GTAATGATTGGGGAAGAAA.....................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------
..................................................GTAATGATTGGGGAAGGGCT....................................................................................................................................................................................2011.001.00---------------1.00------------------------------------------------------------------
.............CCGCTTCCTCTCCTAGGCGACGAGACC..................................................................................................................................................................................................................2711.001.00---------------------1.00------------------------------------------------------------
..................................................................................................TCTGGGCTTGTGGGGCTG......................................................................................................................................181.000.00-1.00--------------------------------------------------------------------------------
..........................................................................................................................................................CGTGGCGGGGTCGGG.................................................................................1520.500.50-------------------------------------------------------------------------0.50--------
..TGCAGCACCCTCCGC.........................................................................................................................................................................................................................................1550.200.20--------0.20-------------------------------------------------------------------------

Antisense strand
TCTGCAGCACCCTCCGCTTCCTCTCCTAGGCGACGAGACCCAGTGGCTAGGTAATGATTGGGGAAGGGCTGAGCAACGGGCAGGCGGCGCAGGGCTTTTCTGGGCTTGTGGGGCTCTTTTCCCTCCGAGGGAGGCGGCGCGCCCGCAGGCCCAGCGTGGCGGGGTCGGGGGCACGTGCAAGCCGCCTCCCTGGGTGGGAACTGGCGCCCCCGCTCACCCCGAGGCCCGGGGCGGGGGCGCAATGCCAGGC
..............................................................................((.((((((((((..(((...(((((((((((((((.((((((((.....)))))).)).)).)))))))))))))...)))...((.....))...)))..))))))))).............................................................
..............................................................63............................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029128(GSM416757)
H520. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
.................................................................................................................................................................................................................................TTGCGCCCCCGCCCCGG........ 1712.002.00----------------------2.00-----------------------------------------------------------
.................................................................................................................................................................................................................................TGCGCCCCCGCCCCGG......... 1652.002.00--------0.20-----------------0.400.20----------------------------------------------0.200.200.200.200.200.20--
.................................................................................................................................................................................................................CCGCTCACCCCGAGGC......................... 161.000.00-------------------------1.00--------------------------------------------------------
...............................................................CTGCCCGTTGCTCAGCCCTT....................................................................................................................................................................... 2011.001.00-------------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................................................CCGGGGCGGGGGCGCTGA....... 181.000.00------------------------------------------1.00---------------------------------------
..............................................................................................................................................................................................................................GGCCCGGGGCGGGGGCGCCTAC...... 221.000.00----------------------------1.00-----------------------------------------------------
.......................................................................................................................................................................................................................ACCCCGAGGCCCGGGAG.................. 171.000.00------------------------------------------------1.00---------------------------------
..............................................................................................................................................................................................................CCCCCGCTCACCCCGTGA.......................... 181.000.00-------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................CCGGGGCGGGGGCGCTGAC...... 191.000.00--------1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................GCGCCCCCGCCCCGG.......... 1501.001.00------------1.00---------------------------------------------------------------------
............TCCGCTTCCTCTCCTAAC............................................................................................................................................................................................................................ 181.000.00----------------------------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................GCCCGGGGCGGGGGCGGT......... 181.000.00--------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................CGAGGCCCGGGGCGGGGCC............ 191.000.00--------------------------------------------------------1.00-------------------------
...............................................................................................................................................................................................................................GCCCGGGGCGGGGGCGCGCG....... 200.500.00-------------------------0.50--------------------------------------------------------
.............................................................................................................................................CACGCTGGGCCTGCGGG............................................................................................ 1720.500.50---------------0.50------------------------------------------------------------------
...............................................................................................................................................................................................................................GCGCCCCCGCCCCGGGC.......... 1740.250.25--------0.25-------------------------------------------------------------------------
.................................................................................................................................................................................................................................CCGGGGCGGGGGCGCAT........ 170.200.00--------------------------------------------------------------------------0.20-------
.......................................................................................................................................................................................TTCCCACCCAGGGAGGC.................................................. 1760.170.17--------------------------------------------------------------------------------0.17-
...................................................................................................................................................................................................................................TTGCGCCCCCGCCCC........ 1570.140.14---------------------------------------------------------------------------------0.14