ID: uc001ans.2_intron_9_0_chr1_6609759_r.3p
GENE: (2)
chr1:6609709-6609958-


(1)
AGO2.ip 		(2)
B-CELL 		(9)
BRAIN 		(4)
BREAST 		(4)
CELL-LINE 		(14)
CERVIX 		(9)
HEART 		(1)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(13)
SKIN

Sense strand
GAATTATTATGTGGCAAACCTCGATTGACTTCTCCTCCCAGATGTGTTCTTAGTATGTAGTACGGCCCCCTGAAAAAGGCTCTCAACCGTAATTCCTACTCTCCTAATGTTTATAGTTTAGCCGAGGAGATGGCAGTCCTAAAGGGCGTGGAATGTAATGAAGTTACTGCTTCTAAGGTGGTTTATTTTTCTCTTTACAGATGACAGGCGTTGGTCGATGCAGAATTTTTCTCCTCAGTGTTCCATTGTG
........................................................................................................................((((......)))).((((....))))..((...(((((...)))))..))...............................................................................
................................................................................................................113........................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR553574(SRX182780)
source: Heart. (Heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		TAX577738(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040029(GSM532914)
G026T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040030(GSM532915)
G013N. (cervix)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040026(GSM532911)
G220N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532883(GSM532883)
G871N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)
....................................................................................................................................................TGGAATGTAATGAAGTATGT..................................................................................20568.400.8041.803.802.203.202.202.401.600.80--0.801.200.20----------0.400.200.400.600.600.400.400.400.200.200.400.400.400.40-0.200.200.200.200.20-0.200.20-0.200.200.200.200.20---0.20--0.20
....................................................................................................................................................TGGAATGTAATGAAGTATG...................................................................................19512.600.804.801.001.800.801.400.801.000.60--0.20----------------------------------------------0.20-
....................................................................................................................................................TGGAATGTAATGAAGTTTGT..................................................................................203.000.001.00------1.00----1.00----------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTAT....................................................................................1852.400.800.800.200.200.20--0.40---0.40--------------------0.20---------------------------
.....................................................................................................................................................GGAATGTAATGAAGTATGT..................................................................................192.000.002.00----------------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTTGTGG.................................................................................212.000.00--------2.00--------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTATGA..................................................................................2051.800.801.20---0.200.20--------------------------0.20--------------------------
....................................................................................................................................................TGGAATGTAATGAAGTGTGT..................................................................................2051.400.800.600.20------0.20-------------------------------------0.20---------0.20--
..........................................................................................................................................CTAAAGGGCGTGGAA.................................................................................................1511.001.00---------------------1.00-------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTTATGGA................................................................................221.000.00--------------------1.00--------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTTTAT..................................................................................201.000.001.00----------------------------------------------------------
...........................................................................................................................................TAAAGGGCGTGGAATGGGG............................................................................................191.000.00-----------------1.00-----------------------------------------
.AATTATTATGTGGCAAGTA......................................................................................................................................................................................................................................191.000.00-------------------1.00---------------------------------------
............................................................................................................................................AAAGGGCGTGGAATGTAATG..........................................................................................2011.001.00------------------1.00----------------------------------------
.....................................................................................................................TTAGCCGAGGAGATGGCAGTCC...............................................................................................................2211.001.00----------------------1.00------------------------------------
................................................................................................................................................................................GGTGGTTTATTTTTCTCTTTACAGATGACAGGCGTT......................................3611.001.00-------------1.00---------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTATGC..................................................................................2050.800.800.60----0.20-----------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTA.....................................................................................1750.800.800.40---0.20-------------------0.20----------------------------------
....................................................................................................................................................TGGAATGTAATGAAGT......................................................................................1650.800.800.20-----0.200.20--0.20------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTGTGG..................................................................................2050.600.80--------0.40----------------0.20---------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTAGGT..................................................................................2050.600.800.20-----------------------0.20---------------------------0.20------
....................................................................................................................................................TGGAATGTAATGAAGTAAGT..................................................................................2050.600.800.60----------------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTAAG...................................................................................1950.600.800.60----------------------------------------------------------
............................................................................................................................................AAAGGGCGTGGAATG...............................................................................................1530.330.33-------------------------------------0.33---------------------
....................................................................................................................................................TGGAATGTAATGAAGTAGTT..................................................................................2050.200.80-----------------------------------------------------0.20-----
....................................................................................................................................................TGGAATGTAATGAAGTATA...................................................................................1950.200.80------0.20----------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTACGT..................................................................................2050.200.80-----------0.20-----------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTCTGT..................................................................................2050.200.80-----------------------0.20-----------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTGTAT..................................................................................2050.200.800.20----------------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTATT...................................................................................1950.200.800.20----------------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTGTGA..................................................................................2050.200.80-------------------------------------------0.20---------------
....................................................................................................................................................TGGAATGTAATGAAGTATC...................................................................................1950.200.800.20----------------------------------------------------------
....................................................................................................................................................TGGAATGTAATGAAGTATGG..................................................................................2050.200.80------------------------------------------------------0.20----

Antisense strand
GAATTATTATGTGGCAAACCTCGATTGACTTCTCCTCCCAGATGTGTTCTTAGTATGTAGTACGGCCCCCTGAAAAAGGCTCTCAACCGTAATTCCTACTCTCCTAATGTTTATAGTTTAGCCGAGGAGATGGCAGTCCTAAAGGGCGTGGAATGTAATGAAGTTACTGCTTCTAAGGTGGTTTATTTTTCTCTTTACAGATGACAGGCGTTGGTCGATGCAGAATTTTTCTCCTCAGTGTTCCATTGTG
........................................................................................................................((((......)))).((((....))))..((...(((((...)))))..))...............................................................................
................................................................................................................113........................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR553574(SRX182780)
source: Heart. (Heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		TAX577738(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040029(GSM532914)
G026T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040030(GSM532915)
G013N. (cervix)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040026(GSM532911)
G220N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532883(GSM532883)
G871N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)
.........................TGACTTCTCCTCCCATGGC.............................................................................................................................................................................................................. 192.000.00---------2.00-------------------------------------------------
.....................................................................................................................................................................................................................GTCGATGCAGAATTTACG................... 181.000.00----------------1.00------------------------------------------
...........................................................................................ATTCCTACTCTCCTAAG.............................................................................................................................................. 171.000.00---------------1.00-------------------------------------------
.................................................................................................ACTCTCCTAATGTTTTTAG...................................................................................................................................... 191.000.00--------------1.00--------------------------------------------