ID: uc001ans.2_intron_8_0_chr1_6605241_r.5p
GENE: (3)
chr1:6609431-6609680-


(1)
BRAIN
(3)
BREAST
(7)
CELL-LINE
(3)
CERVIX
(1)
LIVER
(1)
OTHER
(5)
SKIN

Sense strand
TAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGGTAGAACCCGTTTTCATTCAGAGTTTTGCTAATTACTTGCACCAAAACAGTGATTTCAAATGACTATGTAGGATGTTGTCTTGGAAGAACAGTTGGTCTATCTAGTGCTCTCAGTCCTACAGAATGTAATACGTGTATACGGAAACTATTATAGAAAGGTGTATCGTGAAAAATGTTCATCCTCCCCTCCTTAGTTTCAT
..........................................................................................(((((....((..(((((((((((..........))))).))))))..))..))))).......................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR343335SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR189785SRR038854(GSM458537)
MM653. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
...................................................................................................................................TGGAAGAACAGTTGGATC.....................................................................................................1850.000.0050.00-----------------------
.......................................................................................................................................................................................................................GTGAAAAATGTTCATGCG.................181.000.00-------1.00----------------
...............................................................................................................................GTCTTGGAAGAACAGTTGG........................................................................................................1911.001.00------------------1.00-----
...................................................................................................................................TGGAAGAACAGTTGGTG......................................................................................................171.000.00-----------1.00------------
...............................................................................................................................GTCTTGGAAGAACAGTTGGTCT.....................................................................................................2211.001.00---1.00--------------------
..............................................................................................AAACAGTGATTTCAAATGACT.......................................................................................................................................2111.001.00------------1.00-----------
................................................................CATTCAGAGTTTTGCTCACA......................................................................................................................................................................201.000.00----------------1.00-------
................................................................................................................................TCTTGGAAGAACAGTTGG........................................................................................................1811.001.00-------------1.00----------
....................................................................................................................................................................................................TATTATAGAAAGGTGTGCC...................................191.000.00---------------------1.00--
............CCAGCTATCCGGGTTCAG............................................................................................................................................................................................................................181.000.00----1.00-------------------
...................................................................................................................................TGGAAGAACAGTTGGTGCT....................................................................................................191.000.00-----1.00------------------
.................................................................................................................CTATGTAGGATGTTGTCTTGT....................................................................................................................211.000.00----------1.00-------------
..............AGCTATCCGGGTTCATCCTACA......................................................................................................................................................................................................................2211.001.00---------1.00--------------
....................................................................................................................................GGAAGAACAGTTGGTGCTG...................................................................................................191.000.00------1.00-----------------
..........................TCATCCTACATTTTTGTGCAAG..........................................................................................................................................................................................................2211.001.00-1.00----------------------
......................GGGTTCATCCTACATTTTTG................................................................................................................................................................................................................2011.001.00-1.00----------------------
...................................................................................................................................TGGAAGAACAGTTGGTGC.....................................................................................................181.000.00--------------1.00---------
...........................................................................................................................TGTTGTCTTGGAAGAA...............................................................................................................1630.330.33----------------------0.33-

Antisense strand
TAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGGTAGAACCCGTTTTCATTCAGAGTTTTGCTAATTACTTGCACCAAAACAGTGATTTCAAATGACTATGTAGGATGTTGTCTTGGAAGAACAGTTGGTCTATCTAGTGCTCTCAGTCCTACAGAATGTAATACGTGTATACGGAAACTATTATAGAAAGGTGTATCGTGAAAAATGTTCATCCTCCCCTCCTTAGTTTCAT
..........................................................................................(((((....((..(((((((((((..........))))).))))))..))..))))).......................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR343335SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR189785SRR038854(GSM458537)
MM653. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
....................................................................................................................TGTAGGATGTTGTCTTGCTAT................................................................................................................. 212.000.00--2.00---------------------
............................................................................................................................................................GCTCTCAGTCCTACATCTG........................................................................... 191.000.00-------------------1.00----
....................................................................................................TGATTTCAAATGACTGTGT................................................................................................................................... 191.000.00--------------------1.00---
............................................................................................................................................................................................................................AAATGTTCATCCTCCGGCA........... 191.000.00-----------------1.00------
....................................TTTTTGTGCAAGAGGAAG.................................................................................................................................................................................................... 181.000.00--------1.00---------------
..............AGCTATCCGGGTTCAC............................................................................................................................................................................................................................ 161.000.00---------------1.00--------
...............................................................................................CATTTGAAATCACTGTT.......................................................................................................................................... 1740.250.25-----------------------0.25