ID: uc001aky.2_intron_18_0_chr1_3764178_r.5p
GENE: CEP104(3)
chr1:3764972-3765221-


(2)
AGO2.ip
(4)
B-CELL
(1)
BRAIN
(18)
CELL-LINE
(3)
CERVIX
(1)
HELA
(3)
LIVER
(1)
OTHER
(1)
RRP40.ip
(6)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
TTGCCTGAATATTTTGCACCCTATCAAGCAGAGCGGTTTCGAAGACTTGGGTAAGAATGAAATTTAAAATGTATCATGGCAGCTTTTAGGCTAATTCTACCTGAAAGCTCTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAGCCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACA
.....................................................................................................(((.(((.(((..((((........))))..)))....)))...)))...((((.((((((((((((.((.......))))))))))..))))))))....................................................
....................................................................................................101................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCTGC........................................................................................................................2563.000.0059.004.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCTGC..........................................................................................................................2349.000.0047.002.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCGC.........................................................................................................................2449.000.0045.004.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCTGC...........................................................................................................................2242.000.0042.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCGC...........................................................................................................................2239.000.0037.002.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGCAG........................................................................................................................2533.000.0031.002.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCGC............................................................................................................................2132.000.0031.001.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGCAG..........................................................................................................................2325.000.0023.002.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGCAG............................................................................................................................2121.000.0020.001.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCCGC........................................................................................................................258.000.008.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGCAGT.......................................................................................................................267.000.007.00-------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTGC..........................................................................................................................247.000.006.001.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCCGC..........................................................................................................................235.000.005.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTGGC..............................................................................................................................194.000.004.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCCCC..........................................................................................................................234.000.003.001.00------------------------------------------
..........................................................................................................GCTCTTTTTTTTTTTTTTTTGCAG........................................................................................................................244.000.004.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCTCC........................................................................................................................253.000.003.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTGGG.................................................243.000.002.001.00------------------------------------------
...............................................................................................................................AGATGGAGTCTCGCTGTGGA.......................................................................................................203.000.00---3.00----------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGCAGC.......................................................................................................................263.000.003.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCCTGG.................................................242.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCGA.........................................................................................................................242.000.002.00-------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTCTGC...........................................................................................................................232.000.002.00-------------------------------------------
...............................................................................................................................AGATGGAGTCTCGCTGTGTCACCCATCC...............................................................................................282.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCGGC..........................................................................................................................232.000.002.00-------------------------------------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGCTCG..........................................262.000.002.00-------------------------------------------
........................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGCCG...........................................232.000.00-2.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTAGC.........................................................................................................................242.000.002.00-------------------------------------------
.............................................................................................................................................TGTGTCACCCAGGCTGGAGTGCGGCG...................................................................................262.000.001.001.00------------------------------------------
..........................................................................................................GCTCTTTTTTTTTTTTTTGCAG..........................................................................................................................222.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCTTG........................................................................................................................252.000.00-1.00---1.00--------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTGGC............................................................................................................................212.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGGC.........................................................................................................................242.000.002.00-------------------------------------------
............................................................................................................................................................................ATCTCAGCTCACTGCAGCCTCTGCCACCA.................................................292.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGGG...........................................................................................................................222.000.001.001.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCGGC........................................................................................................................252.000.002.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTATG...........................................................................................................................221.000.001.00-------------------------------------------
...................................................................................................................................................................................CTCACTGCAGCCTCTGCCCAGG.................................................221.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCCAC...........................................................................................................................221.000.001.00-------------------------------------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGTTACAG........................................281.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCCAC........................................................................................................................251.000.001.00-------------------------------------------
............................................................................................................TCTTTTTTTTTTTTTTTTGAGCTT......................................................................................................................241.000.001.00-------------------------------------------
.....................................................................................................................................................................TGGTGCAATCTCAGCTCACTGCAGCCCCG........................................................291.000.00-----1.00--------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTGACG...........................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCAAT........................................................................................................................251.000.00-1.00------------------------------------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGGCC...........................................251.000.001.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCCACC.................................................241.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGTTTT.......................................................................................................................261.000.001.00-------------------------------------------
............................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCT........................221.000.00----------------------1.00---------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGGGG..........................................................................................................................231.000.001.00-------------------------------------------
.......................................................................................................................................TCTCGCTGTGTCACCCAGGCTGGGGCG........................................................................................271.000.00-1.00------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCAGGG...............................................261.000.00-1.00------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTCTGC........................................................................................................................261.000.001.00-------------------------------------------
.......................................................................................................................................TCTCGCTGTGTCACCCAGGTCGG............................................................................................231.000.001.00-------------------------------------------
......................................................................................................................................................................GGTGCAATCTCAGCTCGC..................................................................181.000.00-------1.00------------------------------------
............................................................................................................TCTTTTTTTTTTTTTTTTGAGCCGT.....................................................................................................................251.000.00-1.00------------------------------------------
...............................................................................................................................................................................................TCTGCCTCCCGGGTTCACGCCCCC...................................241.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGTGGC.......................................................................................................................261.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTAT..........................................................................................................................231.000.001.00-------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTAC..........................................................................................................................241.000.001.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTGGGC................................................251.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCTCC...........................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTGGTG...........................................................................................................................221.000.001.00-------------------------------------------
...................................................................................................................................................................................................CCTCCCGGGTTCACGCCAGTTC.................................221.000.00-------------------------1.00------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGCGC..........................................................................................................................231.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCCGC...........................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGAGTT.......................................................................................................................261.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTATGC............................................................................................................................211.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTATGC..........................................................................................................................231.000.001.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCCCCGGC.............................................281.000.00-1.00------------------------------------------
..................................................................................................................................................................................GCTCACTGCAGCCTCTGCCCTGG.................................................231.000.00-1.00------------------------------------------
...............................................................................................................................................................................TCAGCTCACTGCAGCCTCTGCCTTAA.................................................261.000.00-----------1.00--------------------------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCGGGG...............................................211.000.00-1.00------------------------------------------
..................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCGGGT...............................................251.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCCTC........................................................................................................................251.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTATCT..........................................................................................................................231.000.00-1.00------------------------------------------
....................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCTTTT.............................................251.000.00---------------------------1.00----------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTACC..........................................................................................................................231.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTACCC.........................................................................................................................241.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTCGT...........................................................................................................................221.000.001.00-------------------------------------------
.............................................................................................................................................TGTGTCACCCAGGCTGGAGTGCGAC....................................................................................251.000.00-1.00------------------------------------------
...................................................................................................................................................................................................CCTCCCGGGTTCACGCCCTC...................................201.000.00-------------1.00------------------------------
..........................................................................................................................................CGCTGTGTCACCCAGGCTGGAGTGCTCTG...................................................................................291.000.00-------------------------------------1.00------
.......................................................................................................AAAGCTCTTTTTTTTTTTTTTCCCC..........................................................................................................................251.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGGG.............................................................................................................................201.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGGC.............................................................................................................................201.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGTGA..........................................................................................................................231.000.00---------------------------------1.00----------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTACTT........................................................................................................................251.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCGG.........................................................................................................................241.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGAGG............................................................................................................................211.000.00-1.00------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTAAGC.........................................................................................................................241.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCCCG...........................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCCGG........................................................................................................................251.000.001.00-------------------------------------------
...............................................................................................................................................................................................................ACGCCATTCTCCTGCCTCAGCCTCCCGACC.............301.000.001.00-------------------------------------------
.....................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTTCGGG........................................291.000.00----1.00---------------------------------------
....................................................................................................................................................................................TCACTGCAGCCTCTGCCCGT..................................................201.000.00--1.00-----------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGTTT........................................................................................................................251.000.001.00-------------------------------------------
.................................................................................................................................ATGGAGTCTCGCTGTGTC.......................................................................................................1801.001.00-------1.00------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTGCC.........................................................................................................................251.000.001.00-------------------------------------------
.........................................................................................................................................TCGCTGTGTCACCCAGGCTGGAGTGCAGCGCC.................................................................................321.000.00-1.00------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCCCGGATC............................................291.000.00-1.00------------------------------------------
............................................................................................................TCTTTTTTTTTTTTTTTTGAGCGG......................................................................................................................241.000.001.00-------------------------------------------
.........................................................................................................................................TCGCTGTGTCACCCAGGCTGGAGCAGG......................................................................................271.000.00-1.00------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCCCGGGCTG...........................................301.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGCCC............................................................................................................................211.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTGGGG...........................................................................................................................221.000.00-1.00------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCCCGGTTCC...........................................301.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGGAA..........................................................................................................................231.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTATA..........................................................................................................................231.000.00------------------------------------1.00-------
...................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCGGGTCAAG.........................................301.000.00------------------------------------------1.00-
............................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCTAA......................241.000.00--1.00-----------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTGACATG......................................................................................................................281.000.00-----1.00--------------------------------------
.......................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGTTCC...........................................241.000.001.00-------------------------------------------
............................................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA.......................231.000.00--------------------1.00-----------------------
.........................................................................................................AGCTCTTTTTTTTTTTTGGTC............................................................................................................................211.000.001.00-------------------------------------------
.....................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTAA...........................................261.000.00------------1.00-------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGGAA........................................................................................................................251.000.00-1.00------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTCTTC............................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCAG.........................................................................................................................241.000.001.00-------------------------------------------
..................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCAAA................................................241.000.00---------1.00----------------------------------
..........................................................................................................................................CGCTGTGTCACCCAGGCTGGACC.........................................................................................231.000.00--------------------------------------1.00-----
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGAGG...........................................251.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTCGT............................................................................................................................211.000.001.00-------------------------------------------
..............................................................................................................................................................................CTCAGCTCACTGCAGCCTCTGCCCTCA.................................................271.000.00--1.00-----------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTGGC...........................................................................................................................221.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTATGC........................................................................................................................251.000.001.00-------------------------------------------
.................................................................................................................................................................................AGCTCACTGCAGCCTCTGCCTCCCGCGC.............................................281.000.00-1.00------------------------------------------
.......................................................................................................AAAGCTCTTTTTTTTTTTAGG..............................................................................................................................211.000.001.00-------------------------------------------
........................................................................................................AAGCTCTTTTTTTTTTTTTTTTCCAG........................................................................................................................261.000.001.00-------------------------------------------
...............................................................................................................................................................................TCAGCTCACTGCAGCCTCTGCCTAT..................................................251.000.00-----------1.00--------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTATGC.........................................................................................................................241.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTCG..........................................................................................................................231.000.001.00-------------------------------------------
.........................................................................................................AGCTCTTTTTTTTTTTTTTTTGAGATGG.....................................................................................................................2840.250.250.25-------------------------------------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCGGGTTCACGC.......................................2980.250.250.25-------------------------------------------

Antisense strand
TTGCCTGAATATTTTGCACCCTATCAAGCAGAGCGGTTTCGAAGACTTGGGTAAGAATGAAATTTAAAATGTATCATGGCAGCTTTTAGGCTAATTCTACCTGAAAGCTCTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAGCCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACA
.....................................................................................................(((.(((.(((..((((........))))..)))....)))...)))...((((.((((((((((((.((.......))))))))))..))))))))....................................................
....................................................................................................101................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAGGG....................................... 255.000.001.004.00------------------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGGG......................................... 235.000.00-5.00------------------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTGGG.......................................... 223.000.00-3.00------------------------------------------
.....................................................................................................................................AGTCTCGCTGTGTCACCCATTA............................................................................................... 223.000.00----------2.00---------------1.00-----------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTCAGCG....................................... 253.000.00-3.00------------------------------------------
............................................................................................AATTCTACCTGAAAGCTG............................................................................................................................................ 182.000.00--------------1.00---------1.00-------------------
.........................................................................................................................................................GCTGGAGTGCAGTGGTGCAATCTCAGCTCAAAC................................................................ 332.000.00----2.00---------------------------------------
..............................................................................................................................................................................CTCAGCTCACTGCAGCCTCTGCCG.................................................... 242.000.002.00-------------------------------------------
...............................................................................................................................................................GTGCAGTGGTGCAATCTCAGCGT.................................................................... 232.000.00-2.00------------------------------------------
..............................................................................................................................................................................................CTCTGCCTCCCGGGTTCACGCCATTCAA................................ 282.000.00------2.00-------------------------------------
...........................................................................................................................................................................................AGCCTCTGCCTCCCGGGTTCATAT....................................... 241.000.00---1.00----------------------------------------
....................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCGGGTAGC.......................................... 281.000.00-1.00------------------------------------------
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTGGCG......................................... 241.000.00-1.00------------------------------------------
................................................................................................................................GATGGAGTCTCGCTGTGTCCG..................................................................................................... 211.000.00-1.00------------------------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCGCGG....................................... 231.000.00-1.00------------------------------------------
...............................................................................................................................................................................TCAGCTCACTGCAGCCTCTGCCTCCA................................................. 261.000.00-1.00------------------------------------------
.........................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTTTTT......... 241.000.00---------1.00----------------------------------
........................................................................................................................................................GGCTGGAGTGCAGTGGTGCAATCTCAGCTGGGC................................................................. 331.000.00-1.00------------------------------------------
............................................................................................................................TTGAGATGGAGTCTCGCTGTGTTAT..................................................................................................... 251.000.00--1.00-----------------------------------------
.................................................................................................................................................................................................TGCCTCCCGGGTTCACGCCATCGGC................................ 251.000.00-1.00------------------------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTAGGG......................................... 211.000.001.00-------------------------------------------
.......................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGGTTCACTG....................................... 281.000.00-1.00------------------------------------------
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTCAAG......................................... 241.000.00-------------------1.00------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGATG........................................ 221.000.001.00-------------------------------------------
........................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGTTCAAGCG...................................... 281.000.001.00-------------------------------------------
......................................................................................................................................GTCTCGCTGTGTCACCCAGAC............................................................................................... 211.000.00-----------------------------------1.00--------
...........................................................................................................................................................................................AGCCTCTGCCTCCCGGGTTTA.......................................... 211.000.00-1.00------------------------------------------
...................................................................................................................................................ACCCAGGCTGGAGTGCAGTGGTGCAATCGA......................................................................... 301.000.001.00-------------------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGGGG........................................... 211.000.00-----------------------------------------1.00--
.......................................................................................................................................TCTCGCTGTGTCACCCAATAC.............................................................................................. 211.000.00----------------1.00---------------------------
........................................................................................................................................................................................TGCAGCCTCTGCCTCCCGGGTTCTTC........................................ 261.000.00-1.00------------------------------------------
.........................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTAGCTTTTT..... 281.000.00-1.00------------------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTAGCC......................................... 231.000.00-1.00------------------------------------------
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTGAG......................................... 241.000.00-1.00------------------------------------------
................................................................................................................................................................................CAGCTCACTGCAGCCTCTGCCTCCCGGGTTTTG......................................... 331.000.00-1.00------------------------------------------
................................................................................................................................................................................CAGCTCACTGCAGCCTCTGCCTCCCGGGTGGA.......................................... 321.000.001.00-------------------------------------------
............................................................................TGGCAGCTTTTAGGCCC............................................................................................................................................................. 171.000.00---------------------------------------1.00----
...........................................................................................................................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA.................. 291.000.00------------------1.00-------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGTG......................................... 211.000.00-1.00------------------------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTTGCAG........................................ 221.000.001.00-------------------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGGC......................................... 231.000.00-1.00------------------------------------------
....................................................AAGAATGAAATTTAACTAT................................................................................................................................................................................... 191.000.00----------------------------------------1.00---
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTCACGCG...................................... 271.000.00-1.00------------------------------------------
.....................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCGGGTGACC......................................... 281.000.00-1.00------------------------------------------
........................................................................................................................................................GGCTGGAGTGCAGTGGTGCAATCTGAGC...................................................................... 281.000.001.00-------------------------------------------
......................................................................................................................................................................................................................................CCCGAGTAGCTGGGACTACCCG 221.000.00-----------------------------1.00--------------
.......................................................................................................................................................................................CTGCAGCCTCTGCCTCCCGGGTTAC.......................................... 251.000.00-1.00------------------------------------------
..............................................................................................................................................................................................................CACGCCATTCTCCTGTAG.......................... 181.000.00----------------------------------1.00---------
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTTCAGAT....................................... 261.000.00-1.00------------------------------------------
.............................................................................................................................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA................. 281.000.00------------1.00-------------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTCGCC......................................... 211.000.00-------------1.00------------------------------
...................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCGGGAGA........................................... 281.000.00----------------------------1.00---------------
......................................................................................................................................................................................ACTGCAGCCTCTGCCTCGC................................................. 191.000.00-----------------------1.00--------------------
........................................................................................................................................................................................................CGGGTTCACGCCATTCTTGAT............................. 211.000.00--------1.00-----------------------------------
..........................................................................................................................................................................................CAGCCTCTGCCTCCCGGGTTGAA......................................... 231.000.00-----------------1.00--------------------------
.........................................................................................................................................TCGCTGTGTCACCCAGGCTGGAGTCTG...................................................................................... 271.000.001.00-------------------------------------------
.........................................................TGAAATTTAAAATGTCTTG.............................................................................................................................................................................. 191.000.00---------------1.00----------------------------
..............................................................................................................................................................................CTCAGCTCACTGCAGCCTCTGCC..................................................... 231.000.001.00-------------------------------------------
..........................................................................................................................................CGCTGTGTCACCCAGGCTGGAGGT........................................................................................ 241.000.001.00-------------------------------------------
.........................................................................................................................................................................................GCAGCCTCTGCCTCCCGGGTCGC.......................................... 231.000.00-1.00------------------------------------------
...................................................................................................................................................................................................................CATTCTCCTGCCTCAGCCTCCCGAGTATCGG........ 311.000.00-------------------------------1.00------------
................................................................................................................................................................................CAGCTCACTGCAGCCTCTGCCTCCCGGGTTGG.......................................... 321.000.001.00-------------------------------------------
.............................................................................................................................................................................TCTCAGCTCACTGCAGCCTCTGCCC.................................................... 251.000.00-1.00------------------------------------------
..................................................................................................................................................................CAGTGGTGCAATCTCAGCTGAC.................................................................. 221.000.00--------------------------------1.00-----------
......................................................................................................................................................................................................CCCGGGTTCACGCCATTCTCCTTAA........................... 251.000.00------------------------------1.00-------------
................................................GGGTAAGAATGAAATGC......................................................................................................................................................................................... 171.000.00--------1.00-----------------------------------
......................................................................................................................................................................................................................................CCCGAGTAGCTGGGACTACACGGC 241.000.00---------------------1.00----------------------
.........................................................................................................................................................................................GCGTGAACCCGGGAGGCAGAGGCTGC....................................... 2690.220.22-------------------------------------------0.22
.........................................................................................................................................................................................TGGCGTGAACCCGGGAGGCAGAGGCTGC..................................... 2860.170.170.17-------------------------------------------
............................................................................................................................................................................................ATGGCGTGAACCCGGGAGGCAGAGGC.................................... 2670.140.140.14-------------------------------------------
............................................................................................................................................................................................TGGCGTGAACCCGGGAGGCAGAGGC..................................... 2570.140.140.14-------------------------------------------
............................................................................................................................................................................................AATGGCGTGAACCCGGGAGGCAGAGGC................................... 2770.140.140.14-------------------------------------------
............................................................................................................................................................................................GCCTCTGCCTCCCGGGTTCACGCCATTCG................................. 290.140.00-0.14------------------------------------------