ID: uc001ags.1_intron_14_0_chr1_1643840_r.3p
GENE: CDK11B(1)
chr1:1643790-1644039-


(1)
AGO1.ip
(5)
AGO2.ip
(10)
B-CELL
(4)
BRAIN
(3)
BREAST
(37)
CELL-LINE
(4)
CERVIX
(5)
HEART
(3)
HELA
(5)
LIVER
(1)
OTHER
(1)
RRP40.ip
(14)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
GAGGTTGCAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCTGGGGGACAGATGAAGACTCCGTCTCAAAGAAAATAAAATAAAAAAATGAAAAAAAAACTTCACGGATTGAATTACGTAGAAAGCCAGCTTACAAATGTGGACAAAAACGCGATAAGCAAGCTTCTGTTTAGGGGGAATGATGGCGTGTGCCTCTTCAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGC
....................................................................................................((((((..........))).))).(((((((((....((((........)))).)))))...(((((.....))))).....))))................................................................
.........................................................................74....................................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR040013(GSM532898)
G648T. (cervix)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR037938(GSM510476)
293Red. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................................................TAGGGGGAATGATGGTTA..............................................................1812.000.00---3.00----1.002.00---------------1.00------1.00-----1.00--1.00----------1.00-----------1.00-----------------------
...................ATCGCGCCACCGCACTCCAGCCGGGC.............................................................................................................................................................................................................2611.000.0011.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGAAA..............................................................187.000.00---2.00----3.00-------2.00-----------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGTTA..............................................................196.000.00---1.00-------------1.00----------------1.00----1.00--------------------1.00--1.00------------------------
.....................................................................................................................................................................CTGTTTAGGGGGAATGATG..................................................................1924.004.00------------4.00---------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGAAAA.............................................................193.000.00---2.00-----1.00------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCGAGC.............................................................................................................................................................................................................262.000.001.001.00--------------------------------------------------------------------------------------
...........................ACCGCACTCCAGCCTGGGGGACAGGGTG...................................................................................................................................................................................................282.000.002.00---------------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTGGGAC...........................................................................................................................................................................................................282.000.002.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGA................................................................172.000.00--------1.00----------------------------------------------1.00--------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTTAA.............................................................192.000.00---------------------------1.00--------------------------1.00---------------------------------
.......CAGTGAGCCGAGATCGCGCCTA.............................................................................................................................................................................................................................222.000.00--------------------2.00-------------------------------------------------------------------
.......................CGCCACCGCACTCCAGCCGGGC.............................................................................................................................................................................................................221.000.001.00---------------------------------------------------------------------------------------
.................AGATCGCGCCACCGCACTCCAGCCTCAGC............................................................................................................................................................................................................291.000.00-1.00--------------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTGAC.............................................................................................................................................................................................................261.000.001.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGAAA..............................................................191.000.00-----------------------------------------------------------------1.00----------------------
..............CCGAGATCGCGCCACCGCA.........................................................................................................................................................................................................................1901.001.00---------------------------------------------------------1.00------------------------------
..............CCGAGATCGCGCCACCGCACTCCAGCCCGA..............................................................................................................................................................................................................301.000.00-1.00--------------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTTGCC............................................................................................................................................................................................................271.000.00-1.00--------------------------------------------------------------------------------------
.................AGATCGCGCCACCGCACTCCAGCCTGCC.............................................................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................GGAAGCGGGAGCGGGAGCGGTT.....221.000.00---------------------------------------------1.00------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTACA.............................................................191.000.00---1.00------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GCGGGAGCGGGAGCGTGCG....191.000.00-------------------------1.00--------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTGCGCA...........................................................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------------------
....................TCGCGCCACCGCACTCCAGCCTGACG............................................................................................................................................................................................................261.000.001.00---------------------------------------------------------------------------------------
............AGCCGAGATCGCGCCACCGCACGCC.....................................................................................................................................................................................................................251.000.00-1.00--------------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTGCC.............................................................................................................................................................................................................261.000.001.00---------------------------------------------------------------------------------------
.......................CGCCACCGCACTCCAGCCTGGGAAG..........................................................................................................................................................................................................251.000.001.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGATGT.............................................................191.000.00-----------------------------------------------------------1.00----------------------------
.................AGATCGCGCCACCGCACTCCAGCCTGTGCG...........................................................................................................................................................................................................301.000.001.00---------------------------------------------------------------------------------------
.................AGATCGCGCCACCGCACTCCAGGCA................................................................................................................................................................................................................251.000.001.00---------------------------------------------------------------------------------------
..............................................................................AATAAAAAAATGAAAAAAGATC......................................................................................................................................................221.000.00-------------------------------------------------------------1.00--------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTCGT.............................................................191.000.00----------------1.00-----------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCCTGGGGAAA.........................................................................................................................................................................................................301.000.001.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTAA..............................................................181.000.00---1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTAAA.............................................................191.000.00----------------------------------------------1.00-----------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGTTAA.............................................................201.000.00---1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGCGTGTT...........................................................211.000.00------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................................................................GAGCGGGAGCGCAAGAACGG201.000.00----------------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................TTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGA...........3221.001.00--------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................GTTTAGGGGGAATGATGGTT...............................................................201.000.00-------------------------------------------1.00--------------------------------------------
...................................................................AAAGAAAATAAAATAAAAAAAAA................................................................................................................................................................231.000.00-----------------------------------------------1.00----------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGTCG..............................................................191.000.00---------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGAA...............................................................181.000.00-------------------1.00--------------------------------------------------------------------
.......................CGCCACCGCACTCCAGCCTTGCC............................................................................................................................................................................................................231.000.001.00---------------------------------------------------------------------------------------
...................ATCGCGCCACCGCACTCCAGCTGGG..............................................................................................................................................................................................................251.000.00-1.00--------------------------------------------------------------------------------------
.................AGATCGCGCCACCGCACTCCAGAG.................................................................................................................................................................................................................241.000.00-1.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGGAGCAGTTAGAAAGGAAGCGGGAGC...............2721.001.00-------------1.00--------------------------------------------------------------------------
........AGTGAGCCGAGATCGCGCCTTGA...........................................................................................................................................................................................................................231.000.00-----------------------------1.00----------------------------------------------------------
..............................GCACTCCAGCCTGGGGGGGG........................................................................................................................................................................................................201.000.00--------------------------------------------------------------1.00-------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGTTGA.............................................................191.000.00--------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................AGGGGGAATGATGGCAGAC............................................................191.000.00-----------------------------------------------------1.00----------------------------------
........AGTGAGCCGAGATCGCGCCACCGCACTCGAG...................................................................................................................................................................................................................311.000.00--1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGAAAA.............................................................201.000.00-------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................TTAGGGGGAATGATGGTTGG.............................................................201.000.00--------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................TTTAGGGGGAATGATGG.................................................................1760.670.67-0.17------0.33------------------0.17------------------------------------------------------------
...............................................................................................................................................................................................................TTGGAGCAGTTAGAAAGGAAGCGGG..................2520.500.50-------------0.50--------------------------------------------------------------------------
...........................................................................................................................................................................AGGGGGAATGATGGCGTG.............................................................1820.500.50------------------------------------------------------------------------0.50---------------
....................................................................................................................................................................TCTGTTTAGGGGGAATGATGGCGTGTG...........................................................2720.500.50---------------------------------------------------------------------------0.50------------
...................................................................................................................................................................................................TTCAGGGACCGCTTGGAGCAGTTAGA.............................2620.500.50-------------0.50--------------------------------------------------------------------------
......................................................................................................CACGGATTGAATTACGT...................................................................................................................................1720.500.50------------------0.50---------------------------------------------------------------------
................................................................................................................................................................................................................TGGAGCAGTTAGAAAGGAAGCGGGA.................2520.500.50-------------0.50--------------------------------------------------------------------------
...................................................................................................................................TACAAATGTGGACAAAAACGCGATAAGCAAGC.......................................................................................3220.500.50-------------0.50--------------------------------------------------------------------------
.............................................................................................................TGAATTACGTAGAAAGCC...........................................................................................................................1820.500.50--------------------------------------------------------------------------0.50-------------
.............................................................................................................................................................................GGGGAATGATGGCGTGTGC..........................................................1920.500.50-------------------------------------------------------------------------0.50--------------
.........................................TGGGGGACAGATGAAGA................................................................................................................................................................................................1740.500.50------------------------------------------------------------------------------0.25-0.25-------
....................................................................................................................................................................TCTGTTTAGGGGGAATGATGGC................................................................2220.500.50-----------------------------------------------------------------------0.50----------------
.....................................................................................................................................................................CTGTTTAGGGGGAATGATGGC................................................................2120.500.50----------------------------------------------------------------------0.50-----------------
.......................................................................................................................................AATGTGGACAAAAACGC..................................................................................................1720.500.50-------------------------------------------------------------------0.50--------------------
....................................................................................................................................ACAAATGTGGACAAAAACGCGATAAGCAAGCTTCTGTTTAGGGGGAATGATGGCGTGTGC..........................................................6020.500.50----------------------------------------------------------------------------0.50-----------
..................................................................................................................................TTACAAATGTGGACAAAAACGCGATAAGC...........................................................................................2920.500.50-------------0.50--------------------------------------------------------------------------
....................................................................................................................................ACAAATGTGGACAAAAACGCGATAAGC...........................................................................................2720.500.50-------------0.50--------------------------------------------------------------------------
............................................................................................................................................GGACAAAAACGCGATAAGCAAGCTTC....................................................................................2620.500.50--------------0.50-------------------------------------------------------------------------
...................................................................................................CTTCACGGATTGAATTACGTAGA................................................................................................................................2320.500.50--------------------------------------------------------------------0.50-------------------
...................................................................................................................................................................................................................AGCAGTTAGAAAGGAAGCGGGAG................2320.500.50---------------------------------------------------------------------0.50------------------
........................................................................................................................................................................................................................TTAGAAAGGAAGCGGGAGCGGGAGCGC.......2720.500.500.50---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AGAAAGGAAGCGGGAG................1630.330.33-----------------------------------------------------------------------------0.33----------
........................................................................................................................................................................TTTAGGGGGAATGATGGTTA..............................................................2060.330.67----------------------------------------------------------------------------------0.17-0.17---
........................................................................................................................................................................TTTAGGGGGAATGATGGTTAC.............................................................2160.330.67-------------------0.17---------------------------------------------------------------0.17----
........................................................................................................................................................................TTTAGGGGGAATGATG..................................................................1680.250.25-------------------------------------------------------------------------------0.25--------
.........................................................................................................................................................................TTAGGGGGAATGATG..................................................................1590.220.22---------------------------------------------------------------------------------0.22------
........................................................................................................................................................................TTTAGGGGGAATGATGGA................................................................1860.170.67--------0.17-------------------------------------------------------------------------------
........................................................................................................................................................................TTTAGGGGGAATGATGGGA...............................................................1960.170.67-------------------------------------------------------------------------------------0.17--
........................................................................................................................................................................TTTAGGGGGAATGATGTTT...............................................................1980.120.25--------------------------------------------------------------------------------------0.12-
............................................GGGACAGATGAAGACT..............................................................................................................................................................................................1690.110.11---------------------------------------------------------------------------------------0.11
.........................................................................................................................................................................TTAGGGGGAATGATGACA...............................................................1890.110.22---------0.11------------------------------------------------------------------------------

Antisense strand
GAGGTTGCAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCTGGGGGACAGATGAAGACTCCGTCTCAAAGAAAATAAAATAAAAAAATGAAAAAAAAACTTCACGGATTGAATTACGTAGAAAGCCAGCTTACAAATGTGGACAAAAACGCGATAAGCAAGCTTCTGTTTAGGGGGAATGATGGCGTGTGCCTCTTCAGGGACCGCTTGGAGCAGTTAGAAAGGAAGCGGGAGCGGGAGCGCAAGATGC
....................................................................................................((((((..........))).))).(((((((((....((((........)))).)))))...(((((.....))))).....))))................................................................
.........................................................................74....................................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR040013(GSM532898)
G648T. (cervix)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR037938(GSM510476)
293Red. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....TGCAGTGAGCCGAGATCGCGCT............................................................................................................................................................................................................................... 2217.000.00----7.00-----3.004.00----------1.001.001.00---------------------------------------------------------------
...........................................................................TAAAATAAAAAAATGCAC............................................................................................................................................................. 1811.000.00--10.00----1.00--------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGCTAA............................................................................................................................................................................................................................. 245.000.00------3.00----------1.00------------------------------1.00---------------------------------------
............................CCGCACTCCAGCCTGGGGGCGCG....................................................................................................................................................................................................... 234.000.003.001.00--------------------------------------------------------------------------------------
..........................CACCGCACTCCAGCCTGGGGGACACC...................................................................................................................................................................................................... 264.000.003.001.00--------------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGCTAAT............................................................................................................................................................................................................................ 253.000.00------3.00---------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACGCG...................................................................................................................................................................................................... 243.000.003.00---------------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACACGCG.................................................................................................................................................................................................... 263.000.003.00---------------------------------------------------------------------------------------
..............................................................GTCTCAAAGAAAATAAAATAAAAAGT.................................................................................................................................................................. 262.000.002.00---------------------------------------------------------------------------------------
.......................CGCCACCGCACTCCAGCCTGGGGGACAATCT.................................................................................................................................................................................................... 312.000.002.00---------------------------------------------------------------------------------------
.............................................................................................................................................................CCCTAAACAGAAGCTTGC........................................................................... 1822.002.00---------------------2.00------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACAGGCG.................................................................................................................................................................................................... 262.000.00-2.00--------------------------------------------------------------------------------------
........................................................................................................................................................................TTTAGGGGGAATGATGAA................................................................ 1882.000.00-----------------------------------1.00----1.00-----------------------------------------------
..........................CACCGCACTCCAGCCTGGGGGACC........................................................................................................................................................................................................ 242.000.00-2.00--------------------------------------------------------------------------------------
.............................................................TTTTATTTTATTTTCTTTGAGACG..................................................................................................................................................................... 2421.501.50-1.50--------------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACACA...................................................................................................................................................................................................... 241.000.001.00---------------------------------------------------------------------------------------
..........................................................................ATAAAATAAAAAAATGACTTT........................................................................................................................................................... 211.000.00-------1.00--------------------------------------------------------------------------------
..........................CACCGCACTCCAGCCTGGGCCTC......................................................................................................................................................................................................... 231.000.00-1.00--------------------------------------------------------------------------------------
.....................................................................AGAAAATAAAATAAAAACAAG................................................................................................................................................................ 211.000.00-----1.00----------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGCG......................................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------------------
..........................CACCGCACTCCAGCCTGGGGGATG........................................................................................................................................................................................................ 241.000.001.00---------------------------------------------------------------------------------------
.......................................................................AAAATAAAATAAAAAAATGATTTG........................................................................................................................................................... 241.000.00---------------1.00------------------------------------------------------------------------
............GCGGTGGCGCGATCTCGGCT.......................................................................................................................................................................................................................... 2001.001.00----------1.00-----------------------------------------------------------------------------
............................................................................AAAATAAAAAAATGAAAAAAAACCA..................................................................................................................................................... 251.000.00-1.00--------------------------------------------------------------------------------------
.......................................................AGACTCCGTCTCAAAGAAAATAAAATAAAACCC.................................................................................................................................................................. 331.000.001.00---------------------------------------------------------------------------------------
..................................................................CATTTTTTTATTTTATTTTCTTTG................................................................................................................................................................ 2421.001.00-------1.00--------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACACGCA.................................................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------
...................................................................AAAGAAAATAAAATAAAAAAATAT............................................................................................................................................................... 241.000.00-------1.00--------------------------------------------------------------------------------
.........................CCACCGCACTCCAGCCTGGGAGGG......................................................................................................................................................................................................... 241.000.00------------------1.00---------------------------------------------------------------------
................................................................................TAAAAAAATGAAAAAAACGT...................................................................................................................................................... 201.000.00--1.00-------------------------------------------------------------------------------------
...GTTGCAGTGAGCCGAGATCGCGATA.............................................................................................................................................................................................................................. 251.000.00------------------------------1.00---------------------------------------------------------
..........................................................................................................................................................................TAGGGGGAATGATGGG................................................................ 161.000.00-------------------------------------1.00--------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGTAGA............................................................................................................................................................................................................................. 241.000.00--------------------------------------------------------1.00-------------------------------
............................................................................AAAATAAAAAAATGAAAAAAAC........................................................................................................................................................ 221.000.00--1.00-------------------------------------------------------------------------------------
....................................................................AAGAAAATAAAATAAAAAAATG................................................................................................................................................................ 221.000.00-----1.00----------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGT................................................................................................................................................................................................................................ 211.000.00----1.00-----------------------------------------------------------------------------------
......................GGCTGGAGTGCGGTGGCGC................................................................................................................................................................................................................. 1901.001.00--------------------------------------------------1.00-------------------------------------
............................CCGCACTCCAGCCTGGGGGACAGACGCG.................................................................................................................................................................................................. 281.000.001.00---------------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGTTA.............................................................................................................................................................................................................................. 231.000.00----1.00-----------------------------------------------------------------------------------
..............................GCACTCCAGCCTGGGGGACTCTG..................................................................................................................................................................................................... 231.000.00---------------------------------1.00------------------------------------------------------
...................................................................AAAGAAAATAAAATAAAAAAAGG................................................................................................................................................................ 231.000.00--1.00-------------------------------------------------------------------------------------
...................................................................AAAGAAAATAAAATAAAACG................................................................................................................................................................... 201.000.00-------1.00--------------------------------------------------------------------------------
...................................................................AAAGAAAATAAAATAAAAATCG................................................................................................................................................................. 221.000.00-----1.00----------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGCTAT............................................................................................................................................................................................................................. 241.000.00-----------------------1.00----------------------------------------------------------------
...........................................................................TAAAATAAAAAAATGAAAAAAAACT...................................................................................................................................................... 251.000.00-1.00--------------------------------------------------------------------------------------
.......................................................AGACTCCGTCTCAAAGAAAATAAGGC......................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------
.........................................................................AATAAAATAAAAAAATGAAAAAATC........................................................................................................................................................ 251.000.00--1.00-------------------------------------------------------------------------------------
.........................CCACCGCACTCCAGCCTGGGGGACAGATAC................................................................................................................................................................................................... 301.000.00-1.00--------------------------------------------------------------------------------------
.....................................................................................AAATGAAAAAAAAACGATT.................................................................................................................................................. 191.000.00-----1.00----------------------------------------------------------------------------------
............................................................................AAAATAAAAAAATGAAAATAGG........................................................................................................................................................ 221.000.00--1.00-------------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACGGA...................................................................................................................................................................................................... 241.000.00-1.00--------------------------------------------------------------------------------------
.........................................................................AATAAAATAAAAAAATGAAAAAAGTA....................................................................................................................................................... 261.000.00--1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................TTTAGGGGGAATGATAAA................................................................ 181.000.00-------------------------------1.00--------------------------------------------------------
..........TGAGCCGAGATCGCGCCACCGCACTCTCG................................................................................................................................................................................................................... 291.000.00--1.00-------------------------------------------------------------------------------------
...........................ACCGCACTCCAGCCTGGGGAGGG........................................................................................................................................................................................................ 231.000.00------------------1.00---------------------------------------------------------------------
.......................................................AGACTCCGTCTCAAAGAAAGGG............................................................................................................................................................................. 221.000.00-1.00--------------------------------------------------------------------------------------
.................................................................................AAAAAAATGAAAAAAAGTC...................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------------------
..................GATCGCGCCACCGCACTCCAGCCCAG.............................................................................................................................................................................................................. 261.000.00--1.00-------------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACAAG...................................................................................................................................................................................................... 241.000.001.00---------------------------------------------------------------------------------------
............GTGCGGTGGCGCGATCTCGGCT........................................................................................................................................................................................................................ 2201.001.00----------------------1.00-----------------------------------------------------------------
..GGTTGCAGTGAGCCGAGATCGCGCGGAC............................................................................................................................................................................................................................ 281.000.00--------------1.00-------------------------------------------------------------------------
......................................................................GAAAATAAAATAAAAGC................................................................................................................................................................... 171.000.001.00---------------------------------------------------------------------------------------
.................AGGCTGGAGTGCGGTGGCGCGATCT................................................................................................................................................................................................................ 2501.001.00-------------------------------------------------1.00--------------------------------------
.......................................................AGACTCCGTCTCAAAGAAAGC.............................................................................................................................................................................. 211.000.00-1.00--------------------------------------------------------------------------------------
..........TGAGCCGAGATCGCGCCACCAG.......................................................................................................................................................................................................................... 221.000.00----------------------------------------------------------1.00-----------------------------
.........................................................................AATAAAATAAAAAAATGACTAT........................................................................................................................................................... 221.000.00--1.00-------------------------------------------------------------------------------------
.......CAGTGAGCCGAGATCGCGCGGGC............................................................................................................................................................................................................................ 231.000.00------------------------1.00---------------------------------------------------------------
.........................................................................AATAAAATAAAAAAATGCTTC............................................................................................................................................................ 211.000.00--------------------------1.00-------------------------------------------------------------
.........................................................................AATAAAATAAAAAAATGAACG............................................................................................................................................................ 211.000.00-----1.00----------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACATG...................................................................................................................................................................................................... 241.000.001.00---------------------------------------------------------------------------------------
..............................................................GTCTCAAAGAAAATAAAATAAAAAGTC................................................................................................................................................................. 271.000.001.00---------------------------------------------------------------------------------------
......................................................................GAAAATAAAATAAAAAAAAGC............................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------------------
................................................................................TAAAAAAATGAAAAAAATCG...................................................................................................................................................... 201.000.00---------------1.00------------------------------------------------------------------------
..........................CACCGCACTCCAGCCTCGA............................................................................................................................................................................................................. 191.000.001.00---------------------------------------------------------------------------------------
...................................................................AAAGAAAATAAAATAAAAATGAG................................................................................................................................................................ 231.000.001.00---------------------------------------------------------------------------------------
.........................CCACCGCACTCCAGCCTGGGGGAGGCA...................................................................................................................................................................................................... 271.000.001.00---------------------------------------------------------------------------------------
.......................................................AGACTCCGTCTCAAAGAAGGCC............................................................................................................................................................................. 221.000.001.00---------------------------------------------------------------------------------------
..........................................................CTCCGTCTCAAAGAAAAAA............................................................................................................................................................................. 191.000.00------------------------------------------------------------------1.00---------------------
.....TGCAGTGAGCCGAGATCGCGTTTT............................................................................................................................................................................................................................. 241.000.00---------------------------------------------------1.00------------------------------------
............................................................................AAAATAAAAAAATGAAAAAAAAATTAG................................................................................................................................................... 271.000.00-----1.00----------------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACACAC..................................................................................................................................................................................................... 251.000.001.00---------------------------------------------------------------------------------------
............................................................................AAAATAAAAAAATGAAAAACAG........................................................................................................................................................ 221.000.00-----1.00----------------------------------------------------------------------------------
.............................................................................AAATAAAAAAATGAAAAAACTTT...................................................................................................................................................... 231.000.00--1.00-------------------------------------------------------------------------------------
................................ACTCCAGCCTGGGGGACACCAC.................................................................................................................................................................................................... 221.000.00------------------------------------1.00---------------------------------------------------
..........................CACCGCACTCCAGCCTGGGGGACA........................................................................................................................................................................................................ 241.000.00-1.00--------------------------------------------------------------------------------------
...........................................................................TAAAATAAAAAAATGCGT............................................................................................................................................................. 181.000.00--1.00-------------------------------------------------------------------------------------
...........................ACCGCACTCCAGCCTGGGGGAAGTG...................................................................................................................................................................................................... 251.000.00-1.00--------------------------------------------------------------------------------------
.............................CGCACTCCAGCCTGGGGGACACAG..................................................................................................................................................................................................... 241.000.001.00---------------------------------------------------------------------------------------
......................................................................GAAAATAAAATAAAAAAATGAG.............................................................................................................................................................. 221.000.001.00---------------------------------------------------------------------------------------
.....................................................................AGAAAATAAAATAAAAAAATGAAAAAAAAACTG.................................................................................................................................................... 331.000.00-------1.00--------------------------------------------------------------------------------
.....TGCAGTGAGCCGAGATCGCGCTAAA............................................................................................................................................................................................................................ 251.000.00-----------------1.00----------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACACACG.................................................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------
.....................................................................AGAAAATAAAATAAAAAAACAG............................................................................................................................................................... 221.000.00---------------1.00------------------------------------------------------------------------
............................CCGCACTCCAGCCTGGGGGACAC....................................................................................................................................................................................................... 231.000.001.00---------------------------------------------------------------------------------------
............................................................TTTATTTTATTTTCTTTGAGACGG...................................................................................................................................................................... 2420.500.50-0.50--------------------------------------------------------------------------------------
..................................................................TTTTTTTTCATTTTTTTATTTTATTTTCTTTG........................................................................................................................................................ 3220.500.50--------------------------0.50-------------------------------------------------------------
............................................................TTTTTATTTTATTTTCTTTGAGACGG.................................................................................................................................................................... 2620.500.50-0.50--------------------------------------------------------------------------------------
..........................................................TTTATTTTATTTTCTTTGAGACGGAG...................................................................................................................................................................... 2620.500.50-0.50--------------------------------------------------------------------------------------
.................................................................................AGTTTTTTTTTCATTTTTTT..................................................................................................................................................... 2030.330.33-0.33--------------------------------------------------------------------------------------
.................................................................................AAAAAAATGAAAAAAAAACTT.................................................................................................................................................... 210.330.00-0.33--------------------------------------------------------------------------------------