ID: uc001agd.2_intron_2_0_chr1_1480383_r.3p
GENE: (2)
chr1:1480333-1480582-


(1)
AGO2.ip 		(6)
B-CELL 		(5)
BRAIN 		(29)
BREAST 		(30)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(4)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(29)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GCCCACTTTGTTTTCTGTGGGACCTCCTAGGACAGTGAGGCCCCTGCCTCACCAGGGCATGGCCCACTCCGCTGTCCAGGCCTTCGTCCCGGCTGCCTCTGCTGTGGGGCAGGGAAGGGGCTGGGTGTCCAGGACACAGGCGCTTCCAGGCTTCATACACAGATGCCTTTTCTCTGACGTTCCTTAACTCCCATGTGTAGCTATACACAGAATGGGATTTTACATATGCTGGACAGAAATAAGAGAATCA
.........................................................................................................(((.((((((((((((...(((((...))))).((.(((....))).))..........))))))))))))..(((....))).)))..........................................................
.........................................................................................................106...........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191511(GSM715621)
161genomic small RNA (size selected RNA from . (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAGA.................................................221108.004.0023.0017.0010.0010.00---2.00------2.002.00-------2.001.00-1.00--2.001.00-1.00--2.00--1.001.00---1.00--1.00-1.00-1.001.001.00--1.00-1.001.00-----1.001.00--1.00------1.00--1.00-----1.00-1.001.001.00-1.00--1.001.00-----1.001.00----1.00-1.00-1.00-1.001.001.00----1.00---
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAGA.................................................23132.002.001.002.001.002.00---1.004.00--------1.00-1.002.00------1.001.00-1.00-1.00-----------1.00---------1.00----1.00--1.00--------------------1.00-----1.00-----1.00-1.00----1.001.00-----------1.00-1.001.00----
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAGAA................................................23110.004.00-1.00--------3.00----1.00-1.00-----------------------------1.00-1.00---------------------1.00---------------------------------1.00-----------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAGAA................................................2419.002.00--1.001.00--------------------1.00---------------1.00-------------------1.00-------------1.00-----------------------------1.00----1.00------1.00------
.................................................................................................................................................................................................................GAATGGGATTTTACATATGCT....................2119.009.00----5.00-2.00---------2.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CGTTCCTTAACTCCCATGTGTAGA.................................................247.000.00---1.00---------3.00--------------------1.00------------------1.00--------------------------------------------1.00------------------------
....................................................................................................................................................................................................................................CTGGACAGAAATAAGAGAAT..2017.007.00-----6.00------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAG..................................................2114.004.00-2.00-----------------1.00---------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................................................ATATGCTGGACAGAAATA.........1812.002.00-------------------------------2.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATATGCTGGACAGAAATAAGAGA....2312.002.00------------1.00--------------------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TATACACAGAATGGGATTTTACA..........................2312.002.00-----------2.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGACAGAAATAAGATGAA..192.000.00---------2.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAGAG................................................2412.002.00--1.00-------------------------------------------------------------------1.00----------------------------------------------------
..................................................................................................................................................................................................................AATGGGATTTTACATATGCTGGACAGAAATAAG.......3312.002.00------------------2.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAG..................................................2212.002.00-1.00--------------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TTACATATGCTGGACAGA.............1812.002.00--2.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TATGCTGGACAGAAATAAG.......1912.002.00---------1.00-----------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACAGAATGGGATTTTACATATGCT....................2412.002.00----1.00----------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................................................................................ATACACAGAATGGGATTTTAC...........................2112.002.00-------------------------1.00-----------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................................................TGACGTTCCTTAACTCCCATGTGTAGAA................................................281.000.00--1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CTGACGTTCCTTAACTCCCATGT......................................................2311.001.00--------------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................................AGGGAAGGGGCTGGGTGT..........................................................................................................................1811.001.00------------------------------------------------------------------------1.00--------------------------------------------------
.................................................................................................................................................................................................................................ATGCTGGACAGAAATAAGAG.....2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GTCCAGGACACAGGCGCTT.........................................................................................................1911.001.00------------------------------------1.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TATGCTGGACAGAAATAAGAGA....2211.001.00---------------------------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGACAGAAATAAGAGGA...181.000.00---------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAGAG................................................2311.004.00--------------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATATGCTGGACAGAAATAAGAGAATC.2611.001.00---------------------------------------------------------------------------------------------------1.00-----------------------
.................................................................................................................................................................................................................GAATGGGATTTTACATATGC.....................2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAGAT................................................2311.004.00---------------------------------------------------------------------------------------------------------------1.00-----------
........................................................................................................................................................................................................CTATACACAGAATGGG..................................1611.001.00-----------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGGGATTTTACATATGCTGGACAGAAATA.........2911.001.00------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CAGAATGGGATTTTACATATGCTGGACA...............2811.001.00------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ATGGGATTTTACATATGCT....................1911.001.00---------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................CGCTTCCAGGCTTCAGC.............................................................................................171.000.00----------------------------------------------------------------------------1.00----------------------------------------------
................................................................................................................................................................................................................AGAATGGGATTTTACATATGCTGGACAG..............2811.001.00----------------------1.00----------------------------------------------------------------------------------------------------
.....CTTTGTTTTCTGTGGCACG..................................................................................................................................................................................................................................191.000.00----------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................ACATATGCTGGACAGAAATAAGAG.....2411.001.00--------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................CAGGGAAGGGGCTGGGCGG..........................................................................................................................191.000.00-------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GGGATTTTACATATGCTGGA.................2011.001.00-------------------------------------------------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................................TATACACAGAATGGGATTTTACATA........................2511.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTCGA.................................................231.000.00-----------------------------------------------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................GAATGGGATTTTACATATGCTGGACAGAAATA.........3211.001.00-------1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................GGAAGGGGCTGGGTGAAC........................................................................................................................181.000.00-------------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................................TGGGATTTTACATATGCTGGACAGACA...........271.000.00------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTTAACTCCCATGTGTAGA.................................................211.000.00--1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CAGAATGGGATTTTACATATGC.....................2211.001.00------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TATGCTGGACAGAAATAAGAG.....2111.001.00----------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAT..................................................221.000.00---------------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................................................................AGAATGGGATTTTACATATGCT....................2211.001.00----------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GATTTTACATATGCTGGACAGAAATA.........2611.001.00------------------------------------------------------------------------------------------------1.00--------------------------
..............................................................................................................AGGGAAGGGGCTGGGTTTTG........................................................................................................................201.000.00-------------------------------------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................ATATGCTGGACAGAAATAAGAGAAT..2511.001.00--------------------------------------------------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................CTGGACAGAAATAAGAGAATC.2111.001.00------------------------------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................ACGTTCCTTAACTCCCATGTGTAGA.................................................251.000.00-1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGGGATTTTACATATGCT....................1821.001.00----1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTATAG..................................................221.000.00-------------------------------------------------------------------------------------------1.00-------------------------------
..............................................................................................................AGGGAAGGGGCTGGGCGGG.........................................................................................................................191.000.00----------------------------------------------------------------------------------1.00----------------------------------------
................................................................................................................................................................................................................AGAATGGGATTTTACATATGTT....................221.000.00------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTAGT.................................................2311.002.00------------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGACAGAAATAAGAGAA...1821.001.00--0.50----------------------------------------------------------------------------------------------------------------------0.50-
..........................................................................................................................................................................................................................TTTACATATGCTGGACAGAAATAAG.......2511.001.00---------------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TGCTGGACAGAAATAAGAGAA...2111.001.00-------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................TTCCTTAACTCCCATGTGCAGA.................................................221.000.00---------------------------------------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................TTCCTTAACTCCCATGTGTAGAC................................................2311.004.00-----------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................GTTCCTTAACTCCCATGTGTATA.................................................231.000.00----------------------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TATACACAGAATGGGATTTT.............................2020.500.50---------------------------------------0.50-----------------------------------------------------------------------------------
..................................................................................................................................................................................................................AATGGGATTTTACATATG......................1820.500.50-------------------------------------0.50-------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................CATATGCTGGACAGAA............1620.500.50-----------0.50---------------------------------------------------------------------------------------------------------------
...............................................................................................................................TCCAGGACACAGGCGC...........................................................................................................1620.500.50--------------------------------------0.50------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGACAGAAATAAGAGAAT..1920.500.50------------------------------------------------------------------------------------------------------------------------0.50--
....................................................................................................................................................................................................................TGGGATTTTACATATGC.....................1730.330.33-----------------0.33---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGGGATTTTACATATG......................1670.140.14----------------------------------------0.14----------------------------------------------------------------------------------

Antisense strand
GCCCACTTTGTTTTCTGTGGGACCTCCTAGGACAGTGAGGCCCCTGCCTCACCAGGGCATGGCCCACTCCGCTGTCCAGGCCTTCGTCCCGGCTGCCTCTGCTGTGGGGCAGGGAAGGGGCTGGGTGTCCAGGACACAGGCGCTTCCAGGCTTCATACACAGATGCCTTTTCTCTGACGTTCCTTAACTCCCATGTGTAGCTATACACAGAATGGGATTTTACATATGCTGGACAGAAATAAGAGAATCA
.........................................................................................................(((.((((((((((((...(((((...))))).((.(((....))).))..........))))))))))))..(((....))).)))..........................................................
.........................................................................................................106...........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191511(GSM715621)
161genomic small RNA (size selected RNA from . (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................CCACTCCGCTGTCCAGCT......................................................................................................................................................................... 181.000.00--------------------------------------------------------------------------------------------1.00------------------------------
.............TCTGTGGGACCTCCTAGATA......................................................................................................................................................................................................................... 201.000.00---------------------------------------------1.00-----------------------------------------------------------------------------
...........................................TGCCCTGGTGAGGCAG............................................................................................................................................................................................... 1640.250.25------------0.25--------------------------------------------------------------------------------------------------------------
...........................................................................................CCCCACAGCAGAGGCAGC............................................................................................................................................. 1850.200.20--------------------------------------------------------------------------------------------------------------------------0.20