ID: uc001abt.3_intron_0_0_chr1_804056_r.3p
GENE: (2)
chr1:804006-804255-


(1)
B-CELL 		(10)
BREAST 		(9)
CELL-LINE 		(1)
HEART 		(1)
KIDNEY 		(3)
LIVER 		(2)
OTHER 		(1)
UTERUS

Sense strand
AACACAGGCAGCTCTAATATAGCTGTGACCCAGATGCTTCTGTTTCTAGCATGTATTTATTTTGCAGCAAACATTTACATCCATGATGTTTCACTGTCTTTTGAAAATAATTAGGCAATATCTCATCTGAGGTAGGTTGTCTCTAGGGATTGTGTTCTGAGGGAGGAAAACTAATCTGTTCTCTTTCCACTGCATTCTAGGAACAGCAAGAGGACCTTGTGCATGAATAATTTGTTTCCATACTACAGAG
..............................................................................((((......(((((........)))))......((((((((((((....)))))..)))))))....))))....................................................................................................
................................................................65...................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343334SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786TAX577746(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR343335SRR038857(GSM458540)
D20. (cell line)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
...............................................................................................................................TGAGGTAGGTTGTCTGGTT........................................................................................................1940.000.0023.002.006.00-3.00--1.001.00--1.00---1.00-----1.00----------1.00-
...............................................................................................................................TGAGGTAGGTTGTCTAGTT........................................................................................................1934.000.0018.005.00-----2.001.00-2.001.00----1.001.001.00-------1.00--1.00----
...............................................................................................................................TGAGGTAGGTTGTCTGGT.........................................................................................................187.000.003.002.001.00------1.00------------------------
...............................................................................................................................TGAGGTAGGTTGTCTAGT.........................................................................................................187.000.004.00--------1.00---------------1.00-------1.00
...............................................................................................................................TGAGGTAGGTTGTCTAG..........................................................................................................175.000.002.001.00------------1.00----1.00--------------
...............................................................................................................................TGAGGTAGGTTGTCTCGTT........................................................................................................195.000.004.00---------------------------1.00-----
...............................................................................................................................TGAGGTAGGTTGTCTGG..........................................................................................................173.000.001.001.001.00-------------------------------
...............................................................................................................................TGAGGTAGGTTGTCTCGT.........................................................................................................182.000.002.00---------------------------------
.....................................................................AACATTTACATCCATGATGTTTA..............................................................................................................................................................231.000.00-------------1.00--------------------
...............................................................................................................................TGAGGTAGGTTGTCTGGCT........................................................................................................191.000.00-----1.00----------------------------
..........................................................................................................................................................................................................ACAGCAAGAGGACCTTGTGCATGAA.......................2511.001.00------1.00---------------------------
................................................................................................................................................................................................................AGAGGACCTTGTGCATGAACAA....................221.000.00------1.00---------------------------
...............................................................................................................................TGAGGTAGGTTGTCTTGTT........................................................................................................191.000.00-----1.00----------------------------
.........................................................................................................................................................................................................AACAGCAAGAGGACCATAG..............................191.000.00------1.00---------------------------
..................ATAGCTGTGACCCAGATGCTTCTGTTCCT...........................................................................................................................................................................................................291.000.00--------------------1.00-------------
...............................................................................................................................TGAGGTAGGTTGTCTGGA.........................................................................................................181.000.001.00---------------------------------
...............................................................................................................................TGAGGTAGGTTGTCTAATT........................................................................................................191.000.00-----1.00----------------------------
...............................................................................................................................TGAGGTAGGTTGTCTAGTA........................................................................................................191.000.00----------------------1.00-----------
..........................................................................................................................................................................................................ACAGCAAGAGGACCTGGTA.............................191.000.00-------------------------------1.00--

Antisense strand
AACACAGGCAGCTCTAATATAGCTGTGACCCAGATGCTTCTGTTTCTAGCATGTATTTATTTTGCAGCAAACATTTACATCCATGATGTTTCACTGTCTTTTGAAAATAATTAGGCAATATCTCATCTGAGGTAGGTTGTCTCTAGGGATTGTGTTCTGAGGGAGGAAAACTAATCTGTTCTCTTTCCACTGCATTCTAGGAACAGCAAGAGGACCTTGTGCATGAATAATTTGTTTCCATACTACAGAG
..............................................................................((((......(((((........)))))......((((((((((((....)))))..)))))))....))))....................................................................................................
................................................................65...................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343334SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786TAX577746(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR343335SRR038857(GSM458540)
D20. (cell line)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)
.......GCAGCTCTAATATAGAG.................................................................................................................................................................................................................................. 173.000.00---3.00------------------------------
...............................................AGCATGTATTTATTTTGTAG....................................................................................................................................................................................... 202.000.00------------1.00----------1.00----------
..................................................................................................................................................................................................................AGGACCTTGTGCATGGGGT..................... 191.000.00------------------------------1.00---
................................................................................................................................................................................TGTTCTCTTTCCACTGAAC....................................................... 191.000.00------------------------1.00---------