ID: hsa-mir-6890
GENE: QARS(13)
chr3:49137237-49137443-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(7)
BRAIN
(11)
BREAST
(38)
CELL-LINE
(5)
HEART
(4)
HELA
(1)
KIDNEY
(8)
LIVER
(2)
OTHER
(18)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GTAGCCTATCGAGTCAAGTATACACCACACCACCGCACAGGGGACAAATGGTGGGTGTAGAATGGGGTGGGGTGGTGGGGCTGCCGAGCAGGGCGATGGGCCATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACAGGTGCATCTATCCCACCTACGACTACACACACTGCCTCTGTGACTCCATCG
......................................................................(((..((...(((((..((..(((.....))).....))..)))))..))..)))..................................................................................
..................................................51........................................................................125................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782SRR189784SRR037933(GSM510471)
293cand4_rep2. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................CATGGGGTAGGGCAGAGTAG......................................................................................20125.0025.001.005.005.003.00------------1.00-----3.00--------1.00--------1.00--1.00--1.00--------------------------1.00---------1.00--1.00------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGG.....................................................................................21124.0024.001.009.001.00----1.00-------1.002.00-1.00-------1.00----1.00---1.00-1.00----1.00----------1.00----1.00-------------------1.00--------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGG.....................................................................................20120.0020.003.00---2.003.00-----1.00-1.00-----1.00----1.00---1.00-------1.00----1.00--2.00------------1.00--------1.00----------------------------1.00---------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGC...................................................................................23119.0019.0011.00--1.00-1.00---------1.00----------1.00------------1.00-----------1.00----1.00--------------------------------1.00---------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCT..................................................................................24113.0013.004.003.00-2.001.00--------1.00----------1.00-------------------------------------------------1.00------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGC...................................................................................22111.0011.009.00---1.00-------------------------------------------------------------------------------------1.00--------------------
......................................................................................................ATGGGGTAGGGCAGAGTAG......................................................................................1918.008.00--6.00----2.00-------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCT..................................................................................2318.008.006.00------------------1.00------------------------------------------------------------------------1.00------------------
...................................................................................................GCCATGGGGTAGGGCAGAGTAG......................................................................................2218.008.00-8.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGA.....................................................................................2118.0025.00-5.00----1.00------------------------------------------------------1.00------------------1.00------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGG....................................................................................2217.007.005.00-----------------1.00----------------1.00---------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCAAT................................................................................2415.001.00----------4.00-------------------------------------------------------------------------1.00--------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGG.....................................................................................1915.005.004.00--------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGG.....................................................................................2215.005.002.00-----------------1.00---------------------1.00----------------------------------------------1.00-----------------------
.....................................................................................................CATGGGGTAGGGCAGAGT........................................................................................1814.004.00----------------------------1.00-2.00-----------------------------1.00--------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGT...................................................................................2214.004.001.00-----------3.00--------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGG....................................................................................2114.004.00----1.00----------1.00---------------------------------------------------------------------------------1.00----1.00--------
..............................................................................................................GGGCAGAGTAGGGCTGGATGGTAGGG.......................................................................2613.003.00--------------3.00------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGA....................................................................................2213.0024.00------1.00------------1.00----------------1.00--------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACA...................................................5513.003.00-----------------------3.00---------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGT........................................................................................1712.002.00--------------------------------------2.00------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGA...................................................................................242.000.00----1.00----------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGA...................................................................................2312.007.00---------------------2.00-----------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGA...................................................................................2212.004.00-----------------1.00--------------1.00------------------------------------------------------------------------------
.........................................................................GGTGGGGCTGCCGAGCTG....................................................................................................................182.000.00-------------------------------------------------1.00---------------------------1.00---------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAG......................................................................................2112.002.00---------------------1.00------------------------------------------------------------1.00----------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCA..................................................................................2412.0019.00------------------------------------------1.00-------------------------------------------------------1.00------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGA....................................................................................2112.0020.00----------------------------------2.00----------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCGA.................................................................................2312.001.002.00--------------------------------------------------------------------------------------------------------------
.................................CGCACAGGGGACAAATG.............................................................................................................................................................1712.002.00----------------------------------------------------------------1.00------1.00---------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGTTA..................................................................................2412.0024.00------2.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCATC.2912.002.00--------2.00------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCACTGCCTATGCCCCACAGT.................................................222.000.00---------------------------------------------1.00---------------------------------------------1.00-------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGCTA.................................................................................262.000.002.00--------------------------------------------------------------------------------------------------------------
...................ATACACCACACCACCACAG.........................................................................................................................................................................192.000.00---------2.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAGT.................................................2122.001.00---------------------------------------------0.50---------------------------------------0.50-------------------0.50--0.50--
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCAT..2811.001.00--------1.00------------------------------------------------------------------------------------------------------
............................ACCACCGCACAGGGGAC..................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTG.................................................................................2411.001.00---------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTAT.................................................................................2411.004.00---------------------------------------------------------------------------------------------1.00-----------------
...............................................................................................................GGCAGAGTAGGGCTGTTCT.............................................................................191.000.00---------------------------1.00-----------------------------------------------------------------------------------
...............................ACCGCACAGGGGACAA................................................................................................................................................................1611.001.00--------------------------------------------------------------1.00------------------------------------------------
..................................................................................................GGCCATGGGGTAGGGCAGAGTAGGGC...................................................................................2611.001.00------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGC......................................................................3511.001.00-----------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTTT................................................................................2611.0013.001.00--------------------------------------------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGCA..................................................................................2511.001.00---------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................GAGTAGGGCTGGATGGTAGGG.......................................................................2111.001.00-----------------------------1.00---------------------------------------------------------------------------------
.................................................................................................................CAGAGTAGGGCTGGATGGTAG.........................................................................2111.001.00---------------------------------------------------------------------------------------------------1.00-----------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGT....................................................................................2211.0024.00--------------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................ACTACACACACTGCCTCTG...........1911.001.00-------------------------------------------------------------------------------------------------------1.00-------
...................................................TGGGTGTAGAATGGGTG...........................................................................................................................................171.000.00-----------------------------------------------------------------1.00---------------------------------------------
.................GTATACACCACACCACCGCACAGGGGAC..................................................................................................................................................................2811.001.00-----------------------------------------------1.00---------------------------------------------------------------
.....CTATCGAGTCAAGTATACACCACACCA...............................................................................................................................................................................2711.001.00-------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................CACTGCCTATGCCCCACAGA.................................................201.000.00----------------------------------------------------------------------------------------------------1.00----------
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCATCG3011.001.00--------1.00------------------------------------------------------------------------------------------------------
....................................ACAGGGGACAAATGGAC..........................................................................................................................................................171.000.00------------------------------------------------------------------------1.00--------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGC...................................................................................2111.001.001.00--------------------------------------------------------------------------------------------------------------
.................................................GGTGGGTGTAGAATGCTG............................................................................................................................................181.000.00----------------------------------------------------------------------------1.00----------------------------------
......................................................................................................ATGGGGTAGGGCAGAGCAGA.....................................................................................201.000.00-----------------------------1.00---------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTCA................................................................................2511.008.00-----------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................................CCCACCTACGACTACACAGCC...................211.000.00--------------------------------------------------------------------1.00------------------------------------------
............................................................................................................................................................................CTACGACTACACACACTGC................1911.001.00-------1.00-------------------------------------------------------------------------------------------------------
...................................................TGGGTGTAGAATGGGGGGA.........................................................................................................................................191.000.00------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................CACTGCCTCTGTGACTCCATC.2111.001.00-------------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAG..................................................2021.001.00-----------------------------------------------------------1.00---------------------------------------------------
................AGTATACACCACACCACCGCA..........................................................................................................................................................................2111.001.00-------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................................CAGAGTAGGGCTGGATGGTAGG........................................................................2211.001.00-------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGAAG......................................................................................201.000.00-1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGC...................................................................................2411.001.00---1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................GGGGTAGGGCAGAGTAGG.....................................................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGT....................................................................................2111.0020.00----1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGACGG.....................................................................................211.000.00---------------------------------------1.00-----------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCTT.................................................................................231.000.001.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................TCCCACCTACGACTACACATA....................211.000.00--------------------------------------------------1.00------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCATA................................................................................2611.0019.00---------------------------------1.00-----------------------------------------------------------------------------
......................CACCACACCACCGCACAGGGGA...................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00-------------------------------------------
.......ATCGAGTCAAGTATACACCACACCA...............................................................................................................................................................................2511.001.00--------------------1.00------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCAGA................................................................................2511.0011.00---------------------------------------------------------------------1.00-----------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTT.................................................................................2511.0013.00----------------------------------------------------1.00----------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGTAT...................................................................................2311.0025.00---------------------------------------------------------------------------------1.00-----------------------------
..................................................................................................................AGAGTAGGGCTGGATGGTAGGGC......................................................................2311.001.00-----------------------------------------------------------------------------------------------------1.00---------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCTGGATGGTAG.........................................................................3111.001.00-----------------1.00---------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGA.....................................................................................2011.008.00-----1.00---------------------------------------------------------------------------------------------------------
.......ATCGAGTCAAGTATACACCACATA................................................................................................................................................................................241.000.00-------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................GGGCTGGATGGTAGGGGGA....................................................................191.000.00-----------------------------------------1.00---------------------------------------------------------------------
..............................................AATGGTGGGTGTAGAACTG..............................................................................................................................................191.000.00--------1.00------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTT..................................................................................2311.004.00-------------1.00-------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTA..................................................................................2311.004.00---1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGT.....................................................................................2011.008.00---------------------------1.00-----------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGATTAG......................................................................................191.000.00--1.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCACTGCCTATGCCCCCGTA..................................................211.000.00----------------------------------------------------------------------------------------------1.00----------------
.......................................................................................................TGGGGTAGGGCAGAGTAG......................................................................................1811.001.00-----------1.00---------------------------------------------------------------------------------------------------
...............AAGTATACACCACACCACCGCACAGGGGA...................................................................................................................................................................2911.001.00--------------------1.00------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTT.................................................................................2411.008.00----------------------------------------------------------------------------------------1.00----------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGA....................................................................................2011.005.00-------------------------------------1.00-------------------------------------------------------------------------
.............TCAAGTATACACCACACCACC.............................................................................................................................................................................2111.001.00------------------------------------------------------1.00--------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGAA..................................................................................2311.004.00-------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGA.....................................................................................2211.002.00-----1.00---------------------------------------------------------------------------------------------------------
.....................................CAGGGGACAAATGGTGCA........................................................................................................................................................181.000.00----------------------------------------------------------------------1.00----------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGAA...................................................................................2211.0020.00------1.00--------------------------------------------------------------------------------------------------------
........TCGAGTCAAGTATACACCACACC................................................................................................................................................................................2311.001.00--------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAGTTA...............................................2320.501.00-----------------------------------------------------------------------------------------------------------0.50---
..............................CACCGCACAGGGGAC..................................................................................................................................................................1520.500.50----------------------------------------------------------------------------------------------------------0.50----
...........................................................................................................GTAGGGCAGAGTAGGGC...................................................................................1720.500.50--------------------------------------------------------------------------------------------------------0.50------
.........................................................................................................................................CCACTGCCTATGCCCCACAGTT................................................2220.501.00-------------------------------------------------------------------------------------0.50-------------------------
..................................GCACAGGGGACAAATG.............................................................................................................................................................1630.330.33--------------------------------------------------------------------------------------------------------0.33------
..........................................................................................................................GCTGGATGGTAGGGCC.....................................................................1630.330.33----------------------------------------------0.33----------------------------------------------------------------
...........................................................................................................GTAGGGCAGAGTAGGG....................................................................................1640.250.25-------------------------------------------------------------------------------------------------------------0.25-
.............................................................................................................AGGGCAGAGTAGGGC...................................................................................1580.120.12--------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GTAGCCTATCGAGTCAAGTATACACCACACCACCGCACAGGGGACAAATGGTGGGTGTAGAATGGGGTGGGGTGGTGGGGCTGCCGAGCAGGGCGATGGGCCATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACAGGTGCATCTATCCCACCTACGACTACACACACTGCCTCTGTGACTCCATCG
......................................................................(((..((...(((((..((..(((.....))).....))..)))))..))..)))..................................................................................
..................................................51........................................................................125................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782SRR189784SRR037933(GSM510471)
293cand4_rep2. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR029131(GSM416760)
MCF7. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................CCCATCGCCCTGCTCGGC........................................................................................................... 1811.001.00------------------------------------------------1.00--------------------------------------------------------------
..................................GCACAGGGGACAAATGGACCA........................................................................................................................................................ 211.000.00---------1.00-----------------------------------------------------------------------------------------------------