ID: hsa-mir-6885
GENE: GTF2F1(1)
chr19:6389599-6389848-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(2)
AGO3.ip
(7)
B-CELL
(4)
BRAIN
(28)
BREAST
(53)
CELL-LINE
(6)
CERVIX
(3)
FIBROBLAST
(7)
HEART
(3)
HELA
(1)
KIDNEY
(7)
LIVER
(3)
OTHER
(1)
RRP40.ip
(59)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CAAAAATAGAGCGCAAGGCTCGCCCAAATTCCCTTTACCCAGATTTGTCAAAGGCTACCGTTCTCCTCCCTTGTTGCCAAGTGGTAAGTTGGTTTTGAGAATCTAGAGCTTGGCCTAGGGCAAGGAAGGGCGTTCCTGGAGGGGGGCACTGCGCAAGCAAAGCCAGGGACCCTGAGAGGCTTTGCTTCCTGCTCCCCTAGGCTCGGCTGGAGCGGGACTTGAGCAACAAGAAAATCTACCAAGAGGAGGA
...........................................................................................................................................(((((((((......((((((((((.((....))....))))))))))..)))))))))....................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029127(GSM416756)
A549. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR189786SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR343336SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191496(GSM715606)
162genomic small RNA (size selected RNA from . (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCC......................................................................................251144.00144.0055.0043.00---10.003.00-1.00----4.003.003.00---1.001.002.00---2.00-----1.001.00-----1.00-2.00--------------3.00-----2.00-------------------------------1.00-----1.00-----------------1.00--------------------------------1.00-----------1.00-------1.00--------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGC.......................................................................................241101.00101.0013.0013.0019.00--9.008.008.00-3.00-1.00-1.00---1.00-----1.002.00-1.00-1.00----1.001.001.00--4.00--1.00---1.00--1.00-1.001.00----1.00--1.00-1.00------------------1.00--------1.00------------------------------------------------------1.00---1.00--1.00---------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGC.......................................................................................25189.0089.0014.002.0015.0010.0014.003.006.00--2.00---3.00------2.00----------2.001.00-------3.00--1.00---------1.00---1.00---1.00-----1.00--1.00-------1.00-------1.00----1.00---------1.00------1.00--------------------------------------1.00-------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCC......................................................................................26179.0079.0013.0022.001.00--4.005.00-1.006.00---3.004.002.00--1.005.00---------1.00---2.00-1.00-------------1.00-------1.00------------------1.00--1.00---1.00----------------------1.00-------------------------------1.00------------------------------1.00---------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGT.................................................22149.0025.00--4.00--1.00--5.001.00-------1.00---3.00-5.001.001.00--1.003.00-------2.00---2.00-1.00-----1.00----1.00----1.001.00-----1.00-1.00--1.00---1.00--------------------1.00----------------------------------1.00-----1.00-------1.00---------1.001.00---1.00--1.00-----------1.00------------1.00--
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAG........................................................................................24145.0045.0010.004.009.00---1.007.002.00--4.00---1.001.00-----1.00------1.00------------------------1.00----------1.00-----------------1.00---------------------------------------------------------1.00-------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAG........................................................................................23135.0035.008.005.003.004.006.00------2.00--------1.00-1.00------------1.00-------------1.00-----1.00-------------------1.00-----------------------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGA.................................................21133.0014.00--1.00----5.00----------------3.001.00--1.00-2.00-----1.001.00-1.00------1.00-1.001.001.002.00----1.00--1.00----2.00-----------------1.001.00-------------------------------1.00-------------------------------------------------------1.00-----1.00----1.001.00-------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGA.................................................22127.0025.00--------1.00---1.00------1.00-----------2.00----------1.00-1.00---------1.00----1.00----------------1.001.00----1.00--1.00-----------1.00----------1.00----2.00------------1.00---------1.00--1.00-------------1.00-----------1.00-1.001.00-----1.00---1.00--1.00---------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGT.................................................21126.0014.00--2.00------1.00------1.001.002.00-1.00-------2.00-1.00---------------1.00-----1.001.00--------1.00----1.00---------------------1.002.001.00----1.001.00---1.00-----1.00--------------------------1.00-----------------------1.00--------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAG..................................................21125.0025.00--1.00-----6.001.00------2.00-1.00----------------------1.00--1.00-----1.00-1.00-----1.00--------------1.00-----2.00-----1.00--------------------------------1.00----------------1.00----------------1.00-------------------1.00-------------1.00----
........................................................................GTTGCCAAGTGGTAAGGC................................................................................................................................................................18123.004.00---14.004.00------------1.00--------1.00-------1.00------------1.00----------------------------------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTT................................................22122.0014.00-----------------1.00-------2.002.00------------1.00-------------------------1.00-------2.002.00---1.00--1.00---1.00-1.00----1.00--2.00---1.00-------1.00-------------1.00--------------------------------1.00------------------------------------
............................................................................................................................................GGGGGGCACTGCGCAAGCAAAGC.......................................................................................23120.0020.004.007.001.00----4.00---2.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GGGGGGCACTGCGCAAGCAAAGCC......................................................................................24119.0019.0010.002.00------1.00-----1.003.00-----------------------------------------------------1.00-----------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCCT.....................................................................................26116.00144.00---7.007.00-------------------------1.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAG..................................................20114.0014.00--------------1.00-1.00---------1.002.00--1.00-----------------1.00---1.00----------2.00------------1.00----1.00------------------------------------------------------------------------------------1.00------------1.00-----------
........................................................................GTTGCCAAGTGGTAAGG.................................................................................................................................................................17112.004.00------------9.00---------------------------------2.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGC............................................................................................20112.0012.00--1.00-------------------1.00----------1.00--------------1.00---1.00-------1.00-------1.00-------------------1.00---------2.00----------------------------1.00---------------------------------------------1.00-----------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAA..........................................................................................22111.0011.00--------------------1.00-1.00-------1.00-----------2.00---------------1.00--------1.00--------------1.00--------------------------1.00-1.00-------------------------------------------------1.00-----------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCA...........................................................................................21110.0010.00-------------------------------------1.00----------------------1.00--1.001.00-1.00--1.00------------------------1.00-------1.00-------1.00--------------------------------------------------------------------------1.00-----
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCCATC...................................................................................2919.001.00----------9.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCCT.....................................................................................2718.0079.00-----------5.00---------------------1.00-------------------1.00----1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGTA................................................2318.0025.00--4.00-----1.00-----1.00--------------------------------------------------------------------------------------------------------1.00----1.00------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGTT................................................2317.0025.00--------1.00---------1.00---------------1.00-1.00----1.00------------------1.00----1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAGGGGGGCACTGCGCAAGCAAAGCC......................................................................................2717.007.005.002.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGATC...............................................2317.0014.00----------7.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGA.......................................................................................2516.0045.00--6.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAGCAAAGCC......................................................................................2816.006.005.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAT................................................2216.0014.00-------------------------1.00----------1.00------1.00-------1.00----------1.00---------------------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAA.........................................................................................2316.006.00-----------------------------------2.00---------1.00--------------------------1.00----------------------------------------------------1.00--------------1.00--------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAA..........................................................................................2115.005.00------3.00--------------------------------------------------------------------1.00--1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTTA...............................................2314.0014.00--------------------------1.00-1.00----------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GTTGCCAAGTGGTAAG..................................................................................................................................................................1614.004.00------------3.00-------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGAA................................................2314.0025.00--------1.00------------------------------------1.00----1.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGC............................................................................................1913.003.00-----------------------1.00--------------------------------------------------------------------------------------------------------1.00----1.00---------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGA............................................................................................2013.001.00----------------------2.00----------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.............................................................................................................................................GGGGGCACTGCGCAAGCAAAGCC......................................................................................2313.003.00-----------------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAA........................................................................................2313.002.00--------------------------------------------------------------------1.00-------------------------------------------------------------------------1.00----------------------------------------------1.00-
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTA................................................2213.0014.00-------------------------------1.00--1.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAT.............................................................................................193.000.00----------------------------------------------------------------------------------------------------------1.00-----2.00------------------------------------------------------------------------------
....................................................................................................................................................................................................................CGGGACTTGAGCAACAAGAAA.................2112.002.00------------------1.00--------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAACGCC......................................................................................2512.005.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGAT................................................2312.0025.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00------
....................................................................................................................................................................................................................CGGGACTTGAGCAACAAGA...................1912.002.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................................CGGGACTTGAGCAACAAGAAAA................2212.002.00-----------------------------------------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAAA...............................................2312.0014.00-----------------1.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAGC............................................................................................2212.002.00--------------------------------------------1.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCCAG..................................................202.000.00---------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAA........................................................................................2412.006.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTATT.................................................222.000.00----------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAA.........................................................................................2212.002.001.00---------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGT.......................................................................................2412.0035.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAGCAAAGC.......................................................................................2712.002.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGT.......................................................................................2512.0045.00--------------------------------------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GGGACTTGAGCAACAAGA...................1811.001.00----------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAT..................................................211.000.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CGGCTGGAGCGGGACTTGAGCAACA......................2511.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAGCAAAGT.......................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGTAT...............................................2411.0025.00---------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGC................................................................................................1811.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TTGAGCAACAAGAAAATCTACCAAGAGGAG..3011.001.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
...............................................TCAAAGGCTACCGTTCACA........................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGAGT...............................................2411.0025.00--------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCCTC....................................................................................2811.0079.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGTTT...............................................2411.0025.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGGAGCGGGACTTGAGCAACAAG....................2311.001.00-------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
................................................CAAAGGCTACCGTTCATA........................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCTT.....................................................................................2711.0089.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGAGCAACAAGAAAATCTACCAAGAGGAG..2911.001.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAGGGGGGCACTGCGCAAGCAAAGC.......................................................................................2611.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAAA.................................................221.000.00--------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCACAGC.......................................................................................241.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGC.................................................2111.0014.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CTGGAGCGGGACTTGAGCAACAAGAA..................2611.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTAT...............................................2311.0014.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGCTCGGCTGGAGCGGGG.................................191.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
.....................................................................................................................................................................................................................GGGACTTGAGCAACAAGAA..................1911.001.00----------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGCGGGACTTGAGCAACAAGA...................2111.001.00--------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTATT.................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCGTTC...................................................................................2911.0089.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAG.............................................................................................1911.001.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......TAGAGCGCAAGGCTCCGGC.................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GGGGGGCACTGCGCAAGCAAA.........................................................................................2111.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGATT...............................................2311.0014.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGCTTCCTGCTCCCCTAGT.................................................201.000.00---------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAGCAA..........................................................................................2411.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAAT...............................................2311.0014.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTCCCTTGTTGCCAAGTGGTAAGTTGGTTTT..........................................................................................................................................................3111.001.00------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...............................CCTTTACCCAGATTTTCTC........................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGAAA...............................................2411.0025.00--------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTAGA..............................................2411.0014.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCA......................................................................................2511.00101.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTAG...............................................2311.0014.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCACAAA...........................................................................................201.000.00----------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTA...................................................1911.001.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCCCCTAGTTTT..............................................2511.0025.00---------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTTT...............................................2311.0014.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAC................................................2211.0014.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCCA.....................................................................................2611.001.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGGAGCGGGACTTGAGCAACAAGAA..................2511.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GAGCGGGACTTGAGCAACAAGAA..................2311.001.00------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGCTTCCTGCTCCCCTAGAAA...............................................221.000.00----------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
........................................................................................................................................TGGAGGGGGGCACTGCGCAAG.............................................................................................2111.001.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGAAAATCTACCAAGAGGAG..2011.001.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGTTTT..............................................2411.0014.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCAAAGCCA.....................................................................................2711.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCCAT....................................................................................2711.001.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGGGGCACTGCGCAAGCACA.........................................................................................2311.0010.00------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGCTCGGCTGGAGCGGGACTTGAGCAAC.......................2911.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGA.......................................................................................2411.0035.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CGGGACTTGAGCAACAAGAA..................2011.001.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGACT.....................................................................................2611.0035.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GGGGGGCACTGCGCAAGCAAAGT.......................................................................................231.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CAAGAAAATCTACCAAGAGGAG..2211.001.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAGA...............................................2311.0014.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGGGCACTGCGCAAGCAAAGCCTTTC..................................................................................2911.00144.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTATTT................................................2211.001.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGCTTCCTGCTCCCCTAGAA................................................2211.0014.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................TTGCCAAGTGGTAAGG.................................................................................................................................................................1680.500.25----------------------------------0.12---------------------------------------------------0.120.120.12------------------------------------------------------------------------------------------------------
.........................................................................TTGCCAAGTGGTAAG..................................................................................................................................................................1580.250.25------------0.12-------------------------------0.12--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TTGCCAAGTGGTAAGGC................................................................................................................................................................1780.120.25------------------------------------------------------------------------------------------------------------------0.12----------------------------------------------------------------------------
.........................................................................TTGCCAAGTGGTAAGGCGT..............................................................................................................................................................1980.120.25----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
CAAAAATAGAGCGCAAGGCTCGCCCAAATTCCCTTTACCCAGATTTGTCAAAGGCTACCGTTCTCCTCCCTTGTTGCCAAGTGGTAAGTTGGTTTTGAGAATCTAGAGCTTGGCCTAGGGCAAGGAAGGGCGTTCCTGGAGGGGGGCACTGCGCAAGCAAAGCCAGGGACCCTGAGAGGCTTTGCTTCCTGCTCCCCTAGGCTCGGCTGGAGCGGGACTTGAGCAACAAGAAAATCTACCAAGAGGAGGA
...........................................................................................................................................(((((((((......((((((((((.((....))....))))))))))..)))))))))....................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029127(GSM416756)
A549. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR189786SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR343336SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191496(GSM715606)
162genomic small RNA (size selected RNA from . (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
...................................................................................................................................................................................CTTTGCTTCCTGCTCAATC.................................................... 191.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGCAAGGAAGGGCGCGT................................................................................................................... 181.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------
.........................................................CCGTTCTCCTCCCTTGGG............................................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................................CTTTGCTTCCTGCTCAGGG.................................................... 191.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................CTGGAGGGGGGCACTCAGG................................................................................................ 191.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.........................................................CCGTTCTCCTCCCTTGCCGA............................................................................................................................................................................. 201.000.00-------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................GGCTGGAGCGGGACTTCACT.......................... 201.000.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................CCGTTCTCCTCCCTTCCGA.............................................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
.........................................................CCGTTCTCCTCCCTTCC................................................................................................................................................................................ 171.000.00------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
..................CTCGCCCAAATTCCCTGCTG.................................................................................................................................................................................................................... 201.000.00------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------