ID: hsa-mir-6834
GENE: PFDN6(3)
chr6:33257972-33258152+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(1)
AGO3.ip
(4)
B-CELL
(4)
BRAIN
(7)
BREAST
(30)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(9)
HELA
(1)
KIDNEY
(2)
LIVER
(2)
OTHER
(18)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GGAGGCAGAAACTTGAAGCACAACTAACAGAAAATAATATCGTGAAAGAGGTGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCCATGGTTCTGATCACATATGTCCCATCCCTCCATCAGGAACTGGCCCTGCTGGATGGGTCCAACGTGGTCTTTAAACTTCTGGGTCC
....................................................((((((.((((((.((((....((...((((((((.......)).))))))..)).)))).))))))))))))........................................................
..................................................51..............................................................................131................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR343335DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
TAX577580(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..................................................GTGAGGGACTGGGATTTGTGG..............................................................................................................21137.0037.008.006.004.00-2.006.003.00---3.00-----------1.00-----------------------1.00----1.00-------------------------1.00----1.00---------
..................................................GTGAGGGACTGGGATTTGTGGG.............................................................................................................22131.0031.0014.008.001.00-3.00-1.00---------------------2.00--------2.00------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGG..............................................................................................................20123.0023.004.001.004.00-4.001.001.001.00--2.00------1.00-1.00-------------1.00------1.00-----------------1.00---------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCA...................................................20118.0018.00---5.00-----8.00-----5.00----------------------------------------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCAG..................................................21115.0015.00---5.00--------3.00---3.00--------2.00----------------1.00------------------1.00------------------------------
..................................................GTGAGGGACTGGGATTTGT................................................................................................................19112.0012.007.00---------1.00-----------1.00-----------------1.00---------------------------1.00---------1.00-------------
..............................................................................................................TATGTCCCATCCCTCCATCAGT.................................................22111.0015.00---1.00-------7.00-2.00-------------------------------------------------------------------1.00----------
..................................................GTGAGGGACTGGGATTTGTGGA.............................................................................................................22110.0037.00--2.00----------4.00-------------------1.00--------------------1.001.00---------------------------1.00--------
..................................................GTGAGGGACTGGGATTTGTGGGGCGA.........................................................................................................2619.009.00--------8.00---------------------1.00-------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGA................................................................................................................1917.002.004.003.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGT............................................................................................................2317.0031.006.00----------------------------------------------------1.00--------------------------------------
...................................................TGAGGGACTGGGATTTGTGGT.............................................................................................................2116.0023.005.00-1.00-----------------------------------------------------------------------------------------
..................CACAACTAACAGAAAATAATACCG...........................................................................................................................................246.000.00------------------3.00-3.00-----------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCCATGGTTCTGATCACATATGTCCCAT.............................................................6916.006.00--------------6.00-----------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTT..................................................................................................................1716.006.00-5.00-1.00----------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTAA..............................................................................................................2015.002.00-3.001.00----------------------------------------------1.00------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGG.............................................................................................................2114.004.00--2.00-1.00------------1.00--------------------------------------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATC....................................................1914.004.00---1.00--------3.00-------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGA.............................................................................................................2113.0023.00--1.00----------------1.00-------------------------------------1.00----------------------------------
..................................................GTGAGGGACTGGGATTTGTGGT.............................................................................................................2213.0037.00-3.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCG..........................................................................................................2513.003.00-2.00-----1.00------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTG...............................................................................................................2013.003.00--1.00----1.00---------------------1.00--------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGAA.............................................................................................................2213.003.00--1.00------------------------------------2.00----------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGT..............................................................................................................2113.003.00-----3.00--------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGA............................................................................................................2313.0031.001.00-1.00---1.00-------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGTT..........................................................................................................2512.001.00-2.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTG.................................................................................................................1812.002.00---1.00--1.00-------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGGAGGGAC.................................................................................................3412.002.00------------------------------------------------1.00-------------------------------1.00-----------
...................................................TGAGGGACTGGGATTTGTG...............................................................................................................1912.002.00-1.001.00-----------------------------------------------------------------------------------------
......................ACTAACAGAAAATAATATCGTGAAAGAGGAA................................................................................................................................312.000.00------------------------------------2.00-------------------------------------------------------
.........................AACAGAAAATAATATCGTGAAAGAG...................................................................................................................................2512.002.00----------------------------------2.00---------------------------------------------------------
..................................................GTGAGGGACTGGGATT...................................................................................................................1612.002.00----------1.00-------------------------------------------------------1.00-------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCAA.........................................................................................................2612.002.00------------------------2.00-------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGAA...............................................................................................................2012.002.00-2.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCCATGGTTCTGATCACATATGTCCCATCCCTCCATCAG..................................................8112.002.00---------------------2.00----------------------------------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCT...................................................2012.004.00---1.00------------1.00---------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGTAT............................................................................................................2312.003.00-----2.00--------------------------------------------------------------------------------------
.............................GAAAATAATATCGTGAAAGA....................................................................................................................................2012.002.00-----------------------------------2.00--------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGGGC...........................................................................................................2312.002.00--1.00-----------------------1.00-----------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGAA............................................................................................................2212.0023.00-----------------------------1.00--------------------1.00-----------------------------------------
...................................................TGAGGGACTGGGATTTGT................................................................................................................1812.002.00-----------------------2.00--------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGC...........................................................................................................2412.002.00------1.001.00------------------------------------------------------------------------------------
........................TAACAGAAAATAATATCGTGAAAGAGG..................................................................................................................................2712.002.00--------------------------------2.00-----------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGGA............................................................................................................2212.004.00----1.00-1.00-------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTA...............................................................................................................1912.002.00-----2.00--------------------------------------------------------------------------------------
..AGGCAGAAACTTGAAGCACAACT............................................................................................................................................................2312.002.00-------------------------------2.00------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCCATGGTTCTGATCACATATGTCCCATC............................................................7112.002.00--------------------------------------2.00-----------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGAT..........................................................................................................2512.001.00-------1.00---------------------------------------------------1.00--------------------------------
...................................................TGAGGGACTGGGATTTGTAAA.............................................................................................................2111.002.00--------------------------------------------------------------------------------------1.00-----
............................................................................GGAGGGACCTGTACTAGCCATGG..................................................................................2311.001.00-1.00------------------------------------------------------------------------------------------
..............................AAAATAATATCGTGAAAGAGG..................................................................................................................................2111.001.00-1.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTAAGA..............................................................................................................2111.006.00----------------------------------------------------------------1.00---------------------------
...................................................TGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTA............................................................................................3811.001.00--------------------------------------------1.00-----------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCAT..................................................2111.0018.00---1.00----------------------------------------------------------------------------------------
..........................................................CTGGGATTTGTGGGGCGAGGA......................................................................................................2111.001.00-------1.00------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTAA................................................................................................................181.000.00-------1.00------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGA..............................................................................................................2011.002.00-1.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGAAT..........................................................................................................2511.0031.00--1.00-----------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGTA.............................................................................................................2211.003.00---------------------------------------------------------------1.00----------------------------
.......................CTAACAGAAAATAATAATG...........................................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCATC.................................................2211.0018.00---1.00----------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGTAT.........................................................................................................2611.001.00--1.00-----------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGGGA...........................................................................................................231.000.00--1.00-----------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGG............................................................................................................2311.001.00-------------------1.00------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGT..............................................................................................................2011.002.00--1.00-----------------------------------------------------------------------------------------
.........................................GTGAAAGAGGTGAGGGTTTG........................................................................................................................201.000.00---1.00----------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTAT................................................................................................................1911.006.00-1.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTAGTG...............................................................................................................2011.002.00------------------------------------------------------------------------1.00-------------------
....................................................GAGGGACTGGGATTTGT................................................................................................................1711.001.00----------1.00---------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGAAA..............................................................................................................201.000.00-1.00------------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGAAA...........................................................................................................2411.0037.00-----------------1.00--------------------------------------------------------------------------
.....................................................AGGGACTGGGATTTGTGGGGCGAG........................................................................................................2411.001.00------------------------------------------------------------1.00-------------------------------
..........................ACAGAAAATAATATCGTGAAAG.....................................................................................................................................2211.001.00------------------------------------------------------------------------------------1.00-------
..................................................GTGAGGGACTGGGATTTGTGGGGCA..........................................................................................................2511.002.00----------------------------------------------------------------------------1.00---------------
....................................................GAGGGACTGGGATTTGTG...............................................................................................................1811.001.00--------------------------------------------------------------------------1.00-----------------
....................................................................................................TCTGATCACATATGTCCCATCCCTCCATC....................................................2911.001.00------------------------------1.00-------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGA...........................................................................................................2411.001.00-------------------------------------------------------------------------------------1.00------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGG.......................................................................................................2811.001.00----1.00---------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGA..............................................................................................................2111.003.00---------------------------1.00----------------------------------------------------------------
..............................................................................................................TATGTCCCATCCCTCCATCAGCGC...............................................2411.0015.00----------------------------------------------------1.00---------------------------------------
..AGGCAGAAACTTGAAGCA.................................................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00--------------------
.................................................................................................................................AGGAACTGGCCCTGCTGGACGGG.............................231.000.00-----------------------------------------------------------------1.00--------------------------
...............................AAATAATATCGTGAAAGAG...................................................................................................................................1911.001.00-----------------------------------------------1.00--------------------------------------------
...................................AATATCGTGAAAGAGGAACT..............................................................................................................................201.000.00----1.00---------------------------------------------------------------------------------------
............................................................................................................CATATGTCCCATCCCTATCT.....................................................201.000.00---1.00----------------------------------------------------------------------------------------
...................................................TGAGGGACTGGGATTTGTGGGGCGA.........................................................................................................2511.001.00-------------------------------------------------------------------1.00------------------------
.....CAGAAACTTGAAGCAAGCA.............................................................................................................................................................191.000.00--------------------------------------------------------1.00-----------------------------------
..................................................GTGAGGGACTGGGATTTTA................................................................................................................1911.006.00--------------------------1.00-----------------------------------------------------------------
...................................................TGAGGGACTGGGATTGTCG...............................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGTT.............................................................................................................2211.003.00-------------------------------------------------------------------------1.00------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAG........................................................................................................2711.001.00-------1.00------------------------------------------------------------------------------------
........................TAACAGAAAATAATATCGTGAAAGAG...................................................................................................................................2611.001.00---------------------------------------------------------------------1.00----------------------
.................................ATAATATCGTGAAAGAG...................................................................................................................................1711.001.00----------------------------------------------------------------------1.00---------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGGAG.....................................................................................................3011.001.00----1.00---------------------------------------------------------------------------------------
..................................................GTGAGGGACTGGGATTTGTGGGGCGAGGAGG....................................................................................................3111.001.00---------------------------------------------------------------------------------------1.00----
...................................................TGAGGGACTGGGATTTGA................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------
........AAACTTGAAGCACAACTAACAGAAAA...................................................................................................................................................2611.001.00-------------------------------------------------------------------------------1.00------------
.............................................................................GAGGGACCTGTACTAG........................................................................................1620.500.50----------------------------------------------------------------------------------------0.50---
...............................................................ATTTGTGGGGCGAGG.......................................................................................................1520.500.50-----------------------------------------------------------------------------------------0.50--
....................................................................TGGGGCGAGGAGGGA..................................................................................................1580.250.25------------------------------------------------------------------------------------------0.120.12
..................................................GTGAGGGACTGGGAT....................................................................................................................1570.140.14----0.14---------------------------------------------------------------------------------------

Antisense strand
GGAGGCAGAAACTTGAAGCACAACTAACAGAAAATAATATCGTGAAAGAGGTGAGGGACTGGGATTTGTGGGGCGAGGAGGGACCTGTACTAGCCATGGTTCTGATCACATATGTCCCATCCCTCCATCAGGAACTGGCCCTGCTGGATGGGTCCAACGTGGTCTTTAAACTTCTGGGTCC
....................................................((((((.((((((.((((....((...((((((((.......)).))))))..)).)))).))))))))))))........................................................
..................................................51..............................................................................131................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR343335DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
TAX577580(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
...........................................................................................ATGTGATCAGAACCATGGCT...................................................................... 2012.002.00-----------------------------------------2.00--------------------------------------------------
............................................................................................GCCATGGTTCTGATCACC....................................................................... 181.000.00--------------------------------------------------------------1.00-----------------------------
................................................................................................................................................CACGTTGGACCCATCCA.................... 1711.001.00-------------------------------------------1.00------------------------------------------------
...........................................................................TGGCTAGTACAGGTCCCTCCT..................................................................................... 2111.001.00---------------------------------------------1.00----------------------------------------------
........................................................................................................................CAGCAGGGCCAGTTCCTGATGGAGGG................................... 2611.001.00---------------------------1.00----------------------------------------------------------------
...............................................................................................................GATGGAGGGATGGGACAT.................................................... 1811.001.00---------------------------------------------------------------------------1.00----------------
..........................................................................................................AGGGATGGGACATATGTG......................................................... 1830.330.33-0.33------------------------------------------------------------------------------------------