ID: hsa-mir-6817
GENE: BC037884(1)
chr22:25851479-25851728+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(11)
B-CELL
(11)
BRAIN
(14)
BREAST
(39)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(2)
HELA
(4)
LIVER
(4)
OTHER
(31)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
AAGGCAGCATAGCACTGAGTTCTAGATAACTGAGGGGATTTTGCACTTGGATTTGCTGTGCTAAGGTTTGGGTGGGGCTATTACATCTTGCCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAACATCAGTAGCCAGGATTCTGCCATAGGAAGCTTGGAGTGGAACTGACCTGCCCCCTTTCTCTCTGACTCCATGGCAGCTGGGTGAGCTATGAACAGGCCAACTGCAAGGGCGAGCAGTTTGTGTTTG
............................................................................................................................................(((((((.((.((.((((((.((((.............)))).)))))))))))))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR038862(GSM458545)
MM472. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATT.................................................21162.009.00-5.005.005.003.00-1.00-1.003.00--4.003.002.003.003.00--1.00--1.001.00----1.00--2.00----1.00-----1.001.00--2.001.00---2.002.00-------1.00-----1.00-----------1.00-1.00---1.00---1.00-------------------1.00---1.00-------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGT.................................................21153.0010.0016.00-2.00-1.003.002.002.001.00-----1.00---2.001.00-----1.001.001.00-1.00-1.00-1.001.00-----1.00----1.00----2.00----1.00-------1.00----------1.00--------1.00-------------1.00-1.001.001.00--1.00--1.00-----1.00------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGA.................................................21136.0010.0013.00-----4.00------------2.00----2.00-----2.00---2.001.00----1.00---1.00--1.00-----1.00----1.00------1.00----------------1.00------1.00--------1.00------------1.00--------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAT..................................................20126.009.001.0010.001.004.001.00--1.00-2.00-----1.00--1.00---1.001.00------------------------1.00----------------------------------------------1.00------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAA..................................................20118.009.006.00--------2.00------1.00---1.00----------------2.00----------1.00-------2.00----------1.001.00-------------------------1.00-------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAA.................................................21113.009.00-----------6.00---------4.00----------1.00----------------------------------------1.00------------------------------------1.00---------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAT.................................................21110.009.00--------1.00----------------2.00--2.001.00--------1.00------------------------------1.00-1.00------------------------1.00-----------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGG.......................................................................................24210.0010.00----0.501.50-4.00-----------------------------0.50---------------------0.50-0.501.00-----------------------------------------------------0.500.50---0.50----
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAG..................................................20110.0010.00----1.00-----------1.00-----1.00---------------------1.001.00---1.00---1.00-1.00-----------------------------1.00-----------------------1.00----------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCA...................................................1919.009.004.00------------1.00---1.00------1.00---------------------------------------1.00------------1.00------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTT................................................2217.009.00--1.00-----------2.00-----1.00------------2.00-------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATT................................................2216.009.001.00----2.00--1.00-----------1.00--------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTATC..............................................2416.0010.00----------6.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTT................................................2215.0010.002.00----------------------1.00------------------1.00------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGC.................................................2115.005.003.00-----------------------------1.00-----------------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAGA.................................................2214.002.003.00-----------------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAAA................................................2214.009.00-----2.00--------------------------1.00---------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGTA................................................2214.0010.00----------------------1.00---1.00----------------1.00----------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATA.................................................2113.009.00--------2.00------------------------------------------------------------------1.00--------------------------------------------------
.........................................................................................................................................................CTTGGAGTGGAACTGACCTGA............................................................................213.000.00-----------------3.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCA...................................................2012.002.00---------------1.00----------------------------------------------------------------------1.00---------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTA................................................2212.009.00--------------------------------------------------------------------------------------------1.001.00--------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGCAA...............................................2312.005.00------------2.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATAA................................................2212.009.00--------1.00-----------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATAA...............................................2312.009.00-----------------------------------2.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAGT.................................................2212.002.00--1.00------------------------------------------------------------------------------------1.00--------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAG..................................................2112.002.00---------------------------------------1.00-----------------1.00--------------------------------------------------------------------
..........................................................................................................................................TTCTGCCATAGGAAGCTTGGAG..........................................................................................2221.001.00----------------------------------------------------------------------------------------------------------------------0.50---0.50---
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAAT.................................................2211.002.001.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGAT................................................2211.0010.00---------------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCATTT................................................2311.002.00---------------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGCGGA......................................................................................251.000.00---------------------------------------------------------------------------------------------------------1.00--------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGGAA...............................................2311.0010.00-------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCTCTCTGACTCCATGGCAT..................................................2111.002.00-------------------------------------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................TGGGTGAGCTATGAACAGGCC............................2111.001.00----------------------------------------------------------------------------------------------------------1.00-------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATTTC...............................................2311.009.00---------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGA.................................................211.000.00----------------------------------------------------------------------1.00-------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAC.................................................2111.009.00----1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCGTTT................................................221.000.00------------------------------------------------------------------------1.00-----------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGC.................................................211.000.00----------------------------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATCA................................................2211.009.00-----------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................TTTCTCTCTGACTCCATGGCATT.................................................231.000.00--------------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CCTTTCTCTCTGACTCCATGGCAGA.................................................251.000.00-----------------------------------------------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAAG.................................................2111.009.00----1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATAT................................................2211.009.00------------------------------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGG.................................................2111.0010.00------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGA.......................................................................................241.000.00-------------------------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................CCCCCTTTCTCTCTGACTCCATGGA....................................................251.000.00------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCATC.................................................2111.009.00---------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAATA................................................2211.009.00--------------------------------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCCGTA................................................221.000.00--------------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCACT.................................................2111.009.00-------------------------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGGCAGCA................................................2211.005.00-------------------------------------------------------------------------------1.00----------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGATT...............................................2130.670.33-------0.67----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAAA...............................................2130.670.33------------------------------------0.67-----------------------------------------------------------------------------------------
..........................................................................................CCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAAC..............................................................................................................................3420.500.50------------------------------------------------------------0.50-----------------------------------------------------------------
.......................AGATAACTGAGGGGATTTTGCACTTGG........................................................................................................................................................................................................2720.500.50------------------------------------------------------------------------------------------------------------------------0.50-----
...........................................................................................................................................TCTGCCATAGGAAGCTTGGAGTGGA......................................................................................2520.500.50-------------------------------------------------------------------------------------------------------------------0.50----------
.............................................................................................................................................TGCCATAGGAAGCTTGGAGTGG.......................................................................................2220.500.50-----------------------0.50------------------------------------------------------------------------------------------------------
...........................................................................................................................................TCTGCCATAGGAAGCTTGGA...........................................................................................2020.500.50------0.50-----------------------------------------------------------------------------------------------------------------------
..............................................................................................GCTGGGCAAGAGTGAACCCTAGGGGTCA................................................................................................................................2820.500.50-----------------------------------------------------------------------------------------------------------------------0.50------
............................................................................................................................................CTGCCATAGGAAGCTTGGAGTGG.......................................................................................2320.500.50----------------------------------------------------------0.50-------------------------------------------------------------------
....................................................................................................................................................................................TCTCTCTGACTCCATGG.....................................................1720.500.50---------------------------------------------------------0.50--------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAATT..............................................2230.330.33---------------------------------------------------------------------------------------------------------------------------0.33--
......................................................................................................................................................................................TCTCTGACTCCATGGCAG..................................................1830.330.33------0.33-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCTGACTCCATGGCAGAACT..............................................2230.330.33--------------------------------------0.33---------------------------------------------------------------------------------------
......................................................................................................................................................................TGACCTGCCCCCTTTCT...................................................................1740.250.25----------------------------------------------------------------------------------------------------------------------------0.25-
........................................................................................................................................................GCTTGGAGTGGAACTCTG................................................................................1860.170.17-----------------------------------------------------------------------------------------------------------------------------0.17
........................................................................................................................................................GCTTGGAGTGGAACT...................................................................................1560.170.17---------------------------------------------------------------0.17--------------------------------------------------------------
...........................................................................................................................................................................................................GGTGAGCTATGAACAG...............................1660.170.17--------------------------------------------------------------0.17---------------------------------------------------------------
.................................................................GTTTGGGTGGGGCTA..........................................................................................................................................................................1570.140.14------------------------0.14-----------------------------------------------------------------------------------------------------

Antisense strand
AAGGCAGCATAGCACTGAGTTCTAGATAACTGAGGGGATTTTGCACTTGGATTTGCTGTGCTAAGGTTTGGGTGGGGCTATTACATCTTGCCGGGCTGGGCAAGAGTGAACCCTAGGGGTCAACATCAGTAGCCAGGATTCTGCCATAGGAAGCTTGGAGTGGAACTGACCTGCCCCCTTTCTCTCTGACTCCATGGCAGCTGGGTGAGCTATGAACAGGCCAACTGCAAGGGCGAGCAGTTTGTGTTTG
............................................................................................................................................(((((((.((.((.((((((.((((.............)))).)))))))))))))))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038863(GSM458546)
MM603. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR038862(GSM458545)
MM472. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
......................................................ACCCAAACCTTAGCACAGC................................................................................................................................................................................. 1920.500.50----0.50-------------------------------------------------------------------------------------------------------------------------