ID: hsa-mir-6769b
GENE: IKBKE(4)
chr1:206647765-206648257+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(1)
AGO3.ip
(4)
B-CELL
(3)
BRAIN
(16)
BREAST
(28)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(2)
HELA
(1)
LIVER
(3)
OTHER
(40)
SKIN
(1)
XRN.ip

Sense strand
GGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGACGGTAGGTCCGGTGCTTGGTCAGAGAATGGTCTTGTCCTTGACCCTTATGGTCTGGGGAGAATCAGGCCACATGATAACAGAGATTTGGTCCCATGCTCATCAGCAGGTCAGAGACAGCAGGCAAATTGCAGAAGGGAGCAAAGGGGGCAAGGGGGTGGGGGCGGTGCACTGGAAAGGAACGATGGACAGAATCAGTACCTAAGCAGAGGGCTTCCTGGAATAACTGACTTTGGATTCCAGTGTGCGGGATCAGTGTGAGGCCAAGGAGGGAAGGCCAGGCCAGAAGCTGGGACCTGGAGAATGGGGGCTCTGGGCTCCAGGCTGAGCCACTTCTTCCTGGTGGGTGGGGAGGAGAAGTGCCGTCCTCATGAGCCCCTCTCTGTCCCACCCATAGGGCGGAAGCCGGCAGAAGGTACTGGTGATGGAGTACTGCTCCAGTGGGAG
....................................................................................................................................................................................................................................................................................................................................................................................................(((((((((..(((((...(((((....))).))...)))))..)))))))))....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................382..........................................................443................................................
SizePerfect hitTotal NormPerfect NormSRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATAGT.................................................22138.008.004.001.00-2.00------2.001.001.00--1.00-----1.00-1.00--1.001.00-----1.001.001.001.00--1.00--1.00-1.00----1.001.00-1.00--1.00--1.00-1.00---1.00-1.00--1.00-------1.00-1.00----------1.00-1.00-1.001.00---------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAGT.................................................21132.003.00-----2.001.00---1.002.00--1.00-3.001.00---1.001.00-2.00----1.00-1.001.001.00--1.00---------1.00-1.00-----1.00-1.001.00----1.00-------1.00-1.00-1.00---1.00-1.00-----1.00------------------
..................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTGGGGAGGAGAAGTGC....................................................................................23123.0023.009.0010.00---1.00---------1.00----------------1.00-----1.00------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTGGGGAGGAGAAGTGC....................................................................................2119.009.00--4.00-----------------2.00----------------------------------------------1.00---------------------1.00---1.00-----------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATAG..................................................2118.008.00----2.001.00--1.001.00---1.00----1.00----------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAGTT................................................2216.003.00--------------1.00---1.00------2.00---1.001.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATAGA.................................................2214.008.00----2.00-------------1.00---1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTGGGTGGGGAGGAGAAGTGC....................................................................................2514.004.00--3.00----------------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGTGGGGAGGAGAAGTGC....................................................................................2214.004.00----1.00---2.00----------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAG..................................................2013.003.00---------2.00------------------------------------------------------------------1.00----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATAGTT................................................2312.008.00---------------1.00-----------------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGGTGGGGAGGAGAAGTG.....................................................................................2312.002.00-------------2.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATAGTA................................................2312.008.00------1.00-------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGGAGGAGAAGTGC....................................................................................2012.002.00-----1.00------1.00--------------------------------------------------------------------------------------------
..............CAGAACATTGTCAAGCTCTTTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00-----------------2.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................AAAGGGGGCAAGGGGGACG..............................................................................................................................................................................................................................................................................................191.000.00----------------------------1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAGC.................................................2111.003.00---1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AAGGGGGTGGGGGCGTTT......................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAGA.................................................2111.003.00-------------------------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGGCGGAAGCCGGGGAA..................................201.000.00-----------------------------------------------------------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATAGGGCGGAAGG.........................................161.000.00-----------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATAGGGCGGAAGCCGGC.....................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................CAAGGAGGGAAGGCCAGGC....................................................................................................................................................................1911.001.00-----------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTGGGGAGGAGAAGTGCAAT.................................................................................2411.009.00-----------------------------------1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGGAGGAGAAGTGCTAT.................................................................................2311.002.00----------------------------------1.00----------------------------------------------------------------------
.....................................................................................................................................................................................................................TGCACTGGAAAGGAACGATGGACAGAATCAGT........................................................................................................................................................................................................................................................3211.001.00-----------------------------------------1.00---------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATAGTAG...............................................2311.003.00----------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................................................CTGGAAAGGAACGAT.....................................................................................................................................................................................................................................................................1511.001.00-----------------------1.00---------------------------------------------------------------------------------
..............................................................................TCTTGTCCTTGACCCTTTT............................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTACTGGTGATGGAGT................1911.001.00------------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATA...................................................2011.001.00-------------------------------------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................GCAAGGGGGTGGGGGCGGTGCACTGA................................................................................................................................................................................................................................................................................261.000.00---------------------------------------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TGGGCTCCAGGCTGACGAC...................................................................................................................191.000.00---------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCAT....................................................1911.001.00-------------------------------------------------------------------------------------------1.00-------------
.....................................................................................................................................................................................................................................GATGGACAGAATCAGTACCTAAGCAGAGA...........................................................................................................................................................................................................................................291.000.00-------------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTCTGTCCCACCCATATT.................................................2211.001.00----------------------------------------------------------------------------------1.00----------------------
...............................CTTTGCGGTGGAGGAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00-------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGGCCAGAAGCTGGGATTGG....................................................................................................................................................211.000.00----------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTGGGGAGGAGAAGTGT....................................................................................231.000.00-------------------------------------1.00-------------------------------------------------------------------
................................................................................................................................................................AGACAGCAGGCAAATATTG..........................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------1.00---------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTGGGGAGGAGAAGTGCA...................................................................................2411.0023.00-------------------1.00-------------------------------------------------------------------------------------
..AAGCTGAACCACCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GGAACGATGGACAGAATCAGTACCTAAGCAG..............................................................................................................................................................................................................................................3111.001.00--------------------------1.00------------------------------------------------------------------------------
..................................................................................................................................................................................................................CGGTGCACTGGAAAGGAACGATGG...................................................................................................................................................................................................................................................................2411.001.00------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCCCCTCTCTGGCA...........................................................181.000.00----------------------------------------------------------------------------------------1.00----------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGTCCCACCCATA...................................................1911.001.00------------1.00--------------------------------------------------------------------------------------------
....................................CGGTGGAGGAGACGGTAGGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GGTGCACTGGAAAGGAACGATGGA..................................................................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------1.00------------------------------------
....................................................................CAGAGAATGGTCTTGTAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------------1.00-----------------------------------------
............................................................................................................................................................................................................................................................................................................................................AAGCTGGGACCTGGAGCCT..............................................................................................................................................191.000.00---------------------------------------------------------------------------------1.00-----------------------
......................................................................................................................................................................................................................................................................................................................................................................CTGGGCTCCAGGCTGACGA....................................................................................................................191.000.00--------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................GAAGCTGGGACCTGGAAGA...............................................................................................................................................191.000.00---------------------------------------------------1.00-----------------------------------------------------
.......................GTCAAGCTCTTTGCGGTGGAGGAGACGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................291.000.00-----------------------------------------------------1.00---------------------------------------------------
...................................................................................................................................................................................................................................................................................................................GGCCAAGGAGGGAAGGC.........................................................................................................................................................................1730.670.67---------------------------------------0.330.33----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTGGGGAGGAGAAGTG.....................................................................................2030.670.67----------------------------------------------------------------------------------------------------0.330.33---
....................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTGGGGAGGAGAAGTGAT...................................................................................2230.670.67------------------------------------------------------------------------------------------------0.67--------
..................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTGGGGAGGAGAAG.......................................................................................2020.500.50--------------------------------------------------------------------------------------------------0.50------
..................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGTGGGGAGGAGAAGGGC....................................................................................2320.500.50--------------------------------------0.50------------------------------------------------------------------
.............................................................................................................................................................................................................GGGGGCGGTGCACTG.................................................................................................................................................................................................................................................................................1520.500.50---------------------------------------------------------------------------------------------------0.50-----
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTACTGGTGATG....................1540.250.25-------------------0.25-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATGGAGTACT.............1570.140.14-------------------------------------------------------------------------------------------------------0.14-

Antisense strand
GGAAGCTGAACCACCAGAACATTGTCAAGCTCTTTGCGGTGGAGGAGACGGTAGGTCCGGTGCTTGGTCAGAGAATGGTCTTGTCCTTGACCCTTATGGTCTGGGGAGAATCAGGCCACATGATAACAGAGATTTGGTCCCATGCTCATCAGCAGGTCAGAGACAGCAGGCAAATTGCAGAAGGGAGCAAAGGGGGCAAGGGGGTGGGGGCGGTGCACTGGAAAGGAACGATGGACAGAATCAGTACCTAAGCAGAGGGCTTCCTGGAATAACTGACTTTGGATTCCAGTGTGCGGGATCAGTGTGAGGCCAAGGAGGGAAGGCCAGGCCAGAAGCTGGGACCTGGAGAATGGGGGCTCTGGGCTCCAGGCTGAGCCACTTCTTCCTGGTGGGTGGGGAGGAGAAGTGCCGTCCTCATGAGCCCCTCTCTGTCCCACCCATAGGGCGGAAGCCGGCAGAAGGTACTGGTGATGGAGTACTGCTCCAGTGGGAG
....................................................................................................................................................................................................................................................................................................................................................................................................(((((((((..(((((...(((((....))).))...)))))..)))))))))....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................382..........................................................443................................................
SizePerfect hitTotal NormPerfect NormSRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAGCCGGCAGAAGGATTG........................... 211.000.00-------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................AATGGGGGCTCTGGGAGG............................................................................................................................... 181.000.00-------1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TGAGGCCAAGGAGGGAATTGT........................................................................................................................................................................ 211.000.00---1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGATGGAGTACTGCCTG........ 211.000.00-------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................ATCAGTGTGAGGCCAATTG................................................................................................................................................................................. 191.000.00-------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................AAGCTGGGACCTGGAAGG............................................................................................................................................... 181.000.00---------------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................GTACTGATTCTGTCC...................................................................................................................................................................................................................................................... 1560.500.50-------------------------------------------------------------------------------------------------0.50-------
.................................TCTCCTCCACCGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1550.400.40-----------------------------------------0.20------------------------------------------------------------0.20--
............................................................TTCTCTGACCAAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................. 1580.120.12--------------------------------------------------------------------------------------------------------0.12