ID: hsa-mir-4673
GENE: NOTCH1(4)
chr9:139413968-139414217-


(1)
AGO2.ip 		(7)
B-CELL 		(7)
BRAIN 		(13)
BREAST 		(17)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(2)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(18)
SKIN 		(1)
TESTES

Sense strand
GTCCTGTCCAAAATGATTCTTTCAAGCAGGGCGTGTCCCTCTGGGCACTGGAGTGAGGCAGGGGACGGGCACAGACCCCGGGGGCCCCAGGGCAGGGCCGTGGAGGCCAGGCTCTTGTGTCCAGAGCAGTGTGTCGGGGGTCCAGGCAGGAGCCGGACTGGACCTCAGGGAAGAGGCTGACCCGGCCCCTCTTGCGGCAGGCTTCACCGGCCAGAACTGTGAGGAAAATATCGACGATTGTCCAGGAAAC
...........................................................................((((((.(((((((.(((...))).))).))))..(((((.......)))))......))))))((((.(((....)))))))............................................................................................
.........................................................................74..........................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038855(GSM458538)
D10. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGA........................................................................................22113.0013.00-3.00---2.00------1.00-1.00-----------------------1.00-1.00-1.00-----1.00---1.001.00-------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGG.........................................................................................21113.0013.00---1.00---2.001.00--1.00------1.00------------1.00---1.001.00--------1.00-1.00---------1.00------1.00--------------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGG....2213.003.00-----------------------1.00---1.00---------1.00-----------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGT.........................................................................................213.000.00---2.00-----1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGGA...2313.003.00-------------1.00-------------------1.00---------------------------1.00-----------------
.................................................................................................................................................................................................................................AAATATCGACGATTGTCCAGGA...2213.003.00----------------------1.00---------------------------1.001.00---------------------------
..............................................................................CGGGGGCCCCAGGGCACG..........................................................................................................................................................182.000.00--2.00----------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAC.......................................................................................2312.002.00--------1.00---------------------------------------------1.00------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGA.........................................................................................212.000.00-----------1.00-------------------------------------------------------1.00-----------
.............................................................................................................................................................................................................ACCGGCCAGAACTGTGAGGAAAATATCGACG..............3111.001.001.00------------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACT...........................................................................................1911.001.00--------------------------------1.00----------------------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTGGACC......................................................................................2211.001.00------------------------------------------------------------1.00------------------
.............................................................................................................................................................................................................ACCGGCCAGAACTGTGAAG..........................191.000.00----------------------------------------------------------------------1.00--------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGACA......................................................................................2411.002.00---------------------1.00---------------------------------------------------------
................................................................................GGGGCCCCAGGGCAGGCGG.......................................................................................................................................................191.000.00--1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTGTGAGGAAAATA....................2711.001.001.00------------------------------------------------------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTGGA........................................................................................2011.001.00----------------------------------------------------------1.00--------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAT.......................................................................................2311.0013.00--------------------------1.00----------------------------------------------------
......................................................................................................................................................................AGGGAAGAGGCTGACCTC..................................................................181.000.00-------------------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................ATCGACGATTGTCCAGGAAAC2111.001.00---------------------------------------------------------------1.00---------------
....................................................................................................................................................................TCAGGGAAGAGGCTGAAA....................................................................181.000.00-------------------------------------------------1.00-----------------------------
...................................................................................................................................................................................................................CAGAACTGTGAGGAAAATATCGACGATTGTCC.......3211.001.001.00------------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAA.......................................................................................2311.0013.00----------------------------------1.00--------------------------------------------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGGAA..2411.001.00---------------------------------------------------------------------1.00---------
.....................................................TGAGGCAGGGGACGGGGC...................................................................................................................................................................................181.000.00----1.00--------------------------------------------------------------------------
.............................................................................................................................................CCAGGCAGGAGCCGGACTG..........................................................................................1911.001.00--------------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................GCCAGAACTGTGAGGAAAA......................1911.001.00----------------1.00--------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGTCC......................................................................................2411.0013.00------------------------1.00------------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTGTGAGG..........................2111.001.00----------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................AGAACTGTGAGGAAAATATCGACGAT............2611.001.00--------------------------------------------------------------1.00----------------
................................................................................................................................................................................CTGACCCGGCCCCTCTTGCGGCA...................................................2311.001.00-----------------------------------------------------------------1.00-------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGGC.......................................................................................2311.0013.00-----------------------------------------------------------1.00-------------------
..............................................................................................................................................................TGGACCTCAGGGAAGAGGCTGA......................................................................2211.001.00--------------------------------------------1.00----------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTG..........................................................................................1811.001.00-----------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................AATATCGACGATTGTCCAGGAAAT241.000.00--------------------------------------------------------1.00----------------------
............ATGATTCTTTCAAGCAGGGCGTGTC.....................................................................................................................................................................................................................2511.001.00---------------1.00---------------------------------------------------------------
....................................................................................................................................................................................CCCGGCCCCTCTTGCGGCAG..................................................2011.001.00---------1.00---------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACAGG.........................................................................................211.000.00------------1.00------------------------------------------------------------------
......................................................................................................................................................................................................................AACTGTGAGGAAAATATCGACG..............2211.001.00------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................CGGCCAGAACTGTGAGGAAAATATC..................2511.001.001.00------------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGACC......................................................................................2411.001.00------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................................AGGAAAATATCGACGATTGTC........2111.001.00---------------------------------------1.00---------------------------------------
.............................................................................................................................GCAGTGTGTCGGGGGT.............................................................................................................1611.001.00----1.00--------------------------------------------------------------------------
...........................................................................CCCCGGGGGCCCCAGT...............................................................................................................................................................161.000.00-------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................GAACTGTGAGGAAAATATCGACGATTGT.........2811.001.00----------------------------1.00--------------------------------------------------
......................................................................................................................................................................................................................AACTGTGAGGAAAATGAGT.................191.000.00----------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................AACTGTGAGGAAAATATCGA................2011.001.00-----------------------------1.00-------------------------------------------------
...................................................................................................................................................................................................................................ATATCGACGATTGTCCAGGCAAC231.000.00------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTCTG.............................181.000.00-------------------1.00-----------------------------------------------------------
................................................................................................................................................................................................................GGCCAGAACTGTGAGTAAA.......................191.000.001.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................TTCACCGGCCAGAAC.................................1520.500.50--------------------------------------------------------------------------0.50----
...............................................................................................................................................................................................................CGGCCAGAACTGTGAGGA.........................1820.500.500.50------------------------------------------------------------------------------
............................GGGCGTGTCCCTCTG...............................................................................................................................................................................................................1520.500.50---------------------------------------------------------------------------0.50---
................................................................................................................TCTTGTGTCCAGAGCAG.........................................................................................................................1720.500.50-------------------------------------------------------------------------0.50-----
.........................................................................................................................................................................................................................................ACGATTGTCCAGGAA..1530.330.33----------------------------------------------------------------------------0.33--
...................................................................................................................................................................................................................CAGAACTGTGAGGAAAAT.....................1840.250.25------------------------------------------------------------------------------0.25
....................................................................................................................................................GGAGCCGGACTGGAC.......................................................................................1540.250.25-----0.25-------------------------------------------------------------------------
................................................................................................................................................................................................................GGCCAGAACTGTGAGGA.........................1740.250.25-----------------------------------------------------------------------------0.25-

Antisense strand
GTCCTGTCCAAAATGATTCTTTCAAGCAGGGCGTGTCCCTCTGGGCACTGGAGTGAGGCAGGGGACGGGCACAGACCCCGGGGGCCCCAGGGCAGGGCCGTGGAGGCCAGGCTCTTGTGTCCAGAGCAGTGTGTCGGGGGTCCAGGCAGGAGCCGGACTGGACCTCAGGGAAGAGGCTGACCCGGCCCCTCTTGCGGCAGGCTTCACCGGCCAGAACTGTGAGGAAAATATCGACGATTGTCCAGGAAAC
...........................................................................((((((.(((((((.(((...))).))).))))..(((((.......)))))......))))))((((.(((....)))))))............................................................................................
.........................................................................74..........................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038855(GSM458538)
D10. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................................GCCCCTCTTGCGGCATCGG............................................... 191.000.00----------------------------------------------1.00--------------------------------
...........................................................................................................................................................GACTGGACCTCAGGGATTG............................................................................ 191.000.00-----------------------------------------1.00-------------------------------------
.......................................................................................................................................................GCCGGACTGGACCTCGATC................................................................................ 191.000.00----1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................CTTCACCGGCCAGAAA................................. 161.000.00------------------------------------------------------------------1.00------------
.................................................GGAGTGAGGCAGGGGGCGC...................................................................................................................................................................................... 191.000.00-------------------------1.00-----------------------------------------------------
........................................................................................AGGGCAGGGCCGTGGACCC............................................................................................................................................... 191.000.00--------------------1.00----------------------------------------------------------
......................................................GCCCGTCCCCTGCCTC.................................................................................................................................................................................... 1611.001.00-----------------1.00-------------------------------------------------------------
.........................AGGGACACGCCCTGC.................................................................................................................................................................................................................. 1520.500.50------------------------------------------------------------------------0.50------
...................................................................................................................ACTGCTCTGGACACA........................................................................................................................ 1580.120.120.12------------------------------------------------------------------------------