ID: hsa-mir-1909
GENE: REXO1(11)
chr19:1816104-1816273-


(4)
AGO2.ip
(1)
AGO3.ip
(12)
B-CELL
(5)
BRAIN
(19)
BREAST
(47)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(4)
HELA
(6)
LIVER
(3)
OTHER
(1)
RRP40.ip
(19)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343336GSM416733(GSM416733)
HEK293. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038857(GSM458540)
D20. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
....................................................................................CGCAGGGGCCGGGTGCTCACCG................................................................22116.0016.004.00-1.00-------1.00----------1.001.00-----------1.00---2.00-----------1.00-----------------------1.00---------------------1.00----------------1.001.00-----------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGT...............................................................23114.0016.001.006.00-------1.001.00------2.00-------------------------------------------1.00-------------------------------------------1.00------1.00-------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGT.................................................................................................2319.009.00--1.00----------------1.00--------------------1.00-------------1.00-------------------------------1.00-----------1.00---1.00---1.00---------1.00---------------
..................................................GTGAGTGCCGGTGCCTGCCCTG..................................................................................................2219.009.00--1.00-1.00----1.00-------------------------1.00------------------------------------------1.00----1.00---------------------------1.00---1.00------1.00---------
..................................................GTGAGTGCCGGTGCCTGCCCT...................................................................................................2119.009.00--2.00---------------3.00---1.00--------------------1.00--------------------------------------------1.00---------------------1.00---------------------
..................................................GTGAGTGCCGGTGCCTGCCC....................................................................................................2018.008.00-----1.00--1.00-----1.00--------1.00---------------1.00-----------------1.001.00------------------------------1.00------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAC..................................................................2017.007.00-2.00----1.00------1.00------1.00----------------------------1.00-------------1.00--------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACC.................................................................2117.007.001.001.00---1.00--------------1.00------------------------------------------------------------------------------1.00---------------------------1.001.00---
....................................................................................CGCAGGGGCCGGGTGCTCACCGA...............................................................2315.0016.00------1.00--1.00-----------------1.00-1.00----------------------------------------------1.00-------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGCAT.............................................................2615.005.00-------5.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACATC...............................................................2315.007.00---5.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGC...............................................................2315.005.001.00-1.00---------1.00--------------1.00-1.00------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCATC..................................................................................................225.000.00---5.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGT...............................................................244.000.001.00-------------------------------------------------------------1.00---------------------1.00---------1.00-------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGTT................................................................................................2414.009.00--------2.00------------------------------------------------------------------1.00---------------------1.00----------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGA.................................................................................................2314.009.00--------------2.00-------------------------------1.00------1.00------------------------------------------------------------------------------
.................................GATCATCCAGGACAATG........................................................................................................................1714.004.00---------1.00--------------------------1.00----------------------------------1.00-----------------------1.00------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCC................................................................2214.007.00-1.00----------1.00-----------------------------------------------1.00-------------------------------1.00---------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGT.................................................................................................223.000.00-1.00--------------------------------------------------------------1.00--------------------------1.00----------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCACCGT...............................................................223.000.001.00-----1.00----1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCACCGA...............................................................223.000.001.00---1.00--------------------------------------------------------------------------------1.00----------------------------------------------
.......AACCTCATGGCCGACTACCTCAGA...........................................................................................................................................2413.003.00--------------------------2.00-------------------------------------------------------------------------------------------------1.00-------
....................................................................................CGCAGGGGCCGGGTGCTCA...................................................................1913.003.00-1.00--------------------------1.00----------------1.00--------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGTA................................................................................................2413.009.00--------2.00--------------------------------------------------1.00------------------------------------------------------------------------
................................AGATCATCCAGGACAATG........................................................................................................................1812.002.00---------------------------------------------------------------------------------------------1.00-------------------------1.00------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTA.............................................................2512.005.00------------------------2.00-----------------------------------------------------------------------------------------------------------
.............................GACAGATCATCCAGGACAAT.........................................................................................................................2012.002.00-----2.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCCT...............................................................242.000.00-----------1.00------------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACAAGA..............................................................2412.007.00-----------------------------------------------------------------------------------------------------------1.00-----------------1.00------
...........................CAGACAGATCATCCAGGAC............................................................................................................................1912.002.00---------------------------------1.00--------------------------------------------------------1.00-----------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTA..............................................................2412.0016.00----1.00--------------------------------1.00----------------------------------------------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGG.................................................................................................2212.002.00-------------------2.00----------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTT.................................................................................................2312.009.00----------------1.00-------------------------------------------------------------------------------------------------------1.00-----------
.............................GACAGATCATCCAGGACA...........................................................................................................................1822.002.00--------------------0.50--------------------0.50---------------------------------------------------------------------------------------0.500.50-
..................................................GTGAGTGCCGGTGCCTG.......................................................................................................1712.002.00-----------------------1.00-1.00----------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCTT..................................................................222.000.00----------------2.00-------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCA................................................................2212.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCT...............................................................2312.007.00----------------------------------------------------------------------------------------------------------------------1.00--1.00----------
...................................................................................GCGCAGGGGCCGGGTGCTCAC..................................................................2112.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAA.............................................................2512.0016.00------2.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCTTT..............................................................2412.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGGACA...........................................................................................................................2312.002.00----------------------------------------------------1.00------------------------1.00------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGTC..............................................................251.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTA.................................................................................................2311.009.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCT................................................................2211.007.001.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCCC..................................................................201.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------
....................................................................................CGCAGGGGCCGGGTGCTCAAT.................................................................2111.003.00-------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCGT.................................................................231.000.00----------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGC......................................................................................................1811.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTC.............................................................2511.005.00------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TCCAGCGAGGACGCCGGC..................1811.001.00----------------------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTT.............................................................2511.0016.00--------------------------------------------1.00---------------------------------------------------------------------------------------
............................AGACAGATCATCCAGGACAA..........................................................................................................................2011.001.00-------------------------------------------------------1.00----------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCATT.................................................................2031.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGC.................................................................................................2311.009.00----------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCAAA...................................................................................................2111.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------
....................ACTACCTCAGACAGATCATCCAGGACA...........................................................................................................................2711.001.00-------------------------------------------------------------------------------------------------------------1.00----------------------
........................................................................................................................TGGATGGGCACAGCTCCAGCGAGGACG.......................2711.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------
...................................................................................................................................AGCTCCAGCGAGGACGCCGG...................2011.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAATGTGG.....................................................................................................................281.000.00-------------------------------------------------------------------------1.00----------------------------------------------------------
..............TGGCCGACTACCTCATG...........................................................................................................................................171.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGG..............................................................................................................................2011.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAAT.........................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATGTGG.....................................................................................................................2611.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCCC.................................................................231.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGA.............................................................................................................................2011.001.00--------------------------------------------------------------------------------1.00---------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTT....................................................................201.000.00--------------------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAT.............................................................2511.0016.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................CCCTGCGCAGGGGCCGGGTGCTCA...................................................................2411.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATG........................................................................................................................2011.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTT....................................................................181.000.00-----------------------------------------------------------------------------------------------------1.00------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAT..................................................................2011.003.00-----------------------------------------------------------------1.00------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCTT...............................................................241.000.00----------------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTCA.............................................................2511.0016.00---------------------------------------------------------------------------------1.00--------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAA..................................................................211.000.00------1.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................................AGGGGCCGGGTGCTCACCGCTAT............................................................231.000.00----------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACC.................................................................2311.001.00--------------------------------------------------------------------------------------------------------1.00---------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAGA.................................................................221.000.00---------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTTA...................................................................191.000.00-------------------------------------------------------------------------------------------------------1.00----------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTCC.................................................................221.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
....................................CATCCAGGACAATGGTGAGTGCCGGTGC..........................................................................................................2811.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................GGGCCGGGTGCTCACCGGTT.............................................................201.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGA.................................................................................................221.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------
...........................CAGACAGATCATCCAGGA.............................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------------------------------1.00--------
....................................................................................CGCAGGGGCCGGGTGCTCAGCAT...............................................................2311.003.00-----------1.00------------------------------------------------------------------------------------------------------------------------
.............................GACAGATCATCCAGGCCA...........................................................................................................................181.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCATCGT...............................................................241.000.00----------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACCGA...............................................................251.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGCTCCAGCGAGGACGCCGGCGC................2311.001.00------------------------------------------------------------------------------------------------------------------------------1.00-----
....................................................................................CGCAGGGGCCGGGTGCTCTACC................................................................221.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCAT...................................................................................................211.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCAT...............................................................2311.007.00-----1.00------------------------------------------------------------------------------------------------------------------------------
......................TACCTCAGACAGATCATCCAGGACA...........................................................................................................................2511.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................GTGCCGGTGCCTGCCCTGT.................................................................................................191.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------
............................AGACAGATCATCCAGGACAAT.........................................................................................................................2111.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAACG........................................................................................................................201.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCA...................................................................1831.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAGAAA...............................................................2311.003.00-----------------1.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CAGCGAGGACGCCGGCGCCTGCA...........2311.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGAAC....................................................................................................2011.002.00------------------------------------------------------------------------1.00-----------------------------------------------------------
.......AACCTCATGGCCGACTACCTCAG............................................................................................................................................2311.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCTAT.............................................................2511.007.00-------------------------------------1.00----------------------------------------------------------------------------------------------
.................................................................................CTGCGCAGGGGCCGGGTGCTCAC..................................................................2311.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................GTGGATGGGCACAGCTCCAGCGAGGACG.......................2811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATG........................................................................................................................2311.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCCC..................................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTATA................................................................231.000.00------------------------------------------------------------------------------------------------------------1.00-----------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTTT............................................................2611.0016.00--------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCC..................................................................221.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATGTGG.....................................................................................................................2311.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................CAGCTCCAGCGAGGACG.......................1720.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50

Antisense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR343336GSM416733(GSM416733)
HEK293. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038857(GSM458540)
D20. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
..................................................................................................GCGGGGCAGATGCGGTGAGC.................................................... 2011.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................CGCCTGCATGCACCTGGC. 181.000.00------------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................GAGGACGCCGGCGCCTCTT........... 191.000.00---------------------------------------------------------------------------------------1.00--------------------------------------------
......................TACCTCAGACAGATCATTA................................................................................................................................. 191.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------