ID: uc011bvq.57
GENE: HTT(57)
chr4:3230142-3230391+


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(1)
AGO3.ip 		(13)
B-CELL 		(13)
BRAIN 		(31)
BREAST 		(34)
CELL-LINE 		(2)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(1)
HELA 		(1)
KIDNEY 		(10)
LIVER 		(4)
OTHER 		(36)
SKIN

Sense strand
GAGCTTCCCAGCAGCTGTCCAGCCCCTGCCCCACCCTCTCTGTGGGCTCCCTTGCCCGTAACCTGGGGTGTCTGAACGACCCTTGCTAAGGGGCAGACTGTTAGACGGTAGGCATGTGCTGAGTCCCAGTGGCCACACCCACCCACCAGGAGCCTGGCACTGTGGCCGCAGCACTGAGCAGTGCCCCGTTTCTGTGGCAGGTGTCCATACACTCCGTGTGGCTGGGGAACAGCATCACACCCCTGAGGGA
..............................................................................................................................................(((.(((((((..((((((((.((....)).....))))))))..)))))))))).....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577579(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGT.......................................................................................22144.0044.00-2.00-6.00-1.00-------3.00-1.00----1.00-------1.002.002.00---1.00-1.00---1.00--1.00----1.00-------1.00-------2.00-----1.00-----1.00--1.00--1.00----1.00--------1.00---1.001.00---1.00-1.00--------------------1.001.00--1.00-------1.00-1.00------1.00------1.00--
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGT.......................................................................................23132.0032.00-1.00--1.002.00-2.00------1.00-1.001.00--1.002.00--1.00--1.00---1.00---------1.00-------1.001.001.00-1.00-1.00--1.00-1.00-1.00--------------------1.00-1.00--------1.00-----------------1.00-----1.00-------1.00--------1.00-----------1.00-----------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTAT.....................................................................................25119.0032.009.00-4.00-------4.00---------------------------------------------------------------------------------------------------1.001.00-----------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGA.......................................................................................23113.0012.00--------1.00--1.00--------------2.00----1.00-1.00---------1.00----1.00------------------1.00---------1.00------------------------------------1.00------------------1.00--1.00----------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACT.........................................................................................20113.0013.00-2.00-----1.00-1.00------1.00--1.00--------1.00-----------------------1.00----------2.00-----1.00-----------1.00---------------------------------------------1.00-------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTA......................................................................................24112.0032.00---------1.00-----2.00-------3.00---------------------------------1.00-1.00-----------1.00----------------1.00----1.00------------------------------1.00----------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTG........................................................................................22112.0012.00-1.00---1.00-----------2.00-----------------1.00--------------1.00---1.00-1.00----1.00-------------------------------------1.00----------------------------------------------1.00---1.00--------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTT......................................................................................24112.0032.003.00-6.00------1.00--------1.00------------------------------------------------------------------------------------------------------------------------------------1.00-------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACT.........................................................................................2219.009.00--------1.00-------1.00----1.00--1.00-------1.00-------------------1.00-------------------------------------1.00-------------1.00---------------------------------------1.00--------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACT.........................................................................................2118.008.00-------1.00-----------2.00-------1.00----------------------------------------1.00---------------------------------------1.00----------------------------1.00---1.00-----------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTG........................................................................................2118.008.00---------------------------------------------1.00--------------------------------------------------------1.00---1.00--------1.00---------1.00----1.00--------1.00---------------1.00---
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAA.....................................................................................2418.0044.00-----------1.002.00-------1.00-----------------1.00--1.00--2.00------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTG........................................................................................2317.007.00-----1.00--1.00------------------------------1.001.00----1.00-------------------------------------------------1.00-----------------1.00---------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTA........................................................................................2316.009.00---3.00----1.00--1.00----------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTA......................................................................................2316.0044.00-2.00--------1.00-----------------------------------1.00--------------------------------------------1.00----------------------------------------------1.00--------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGT.......................................................................................2416.006.00-----1.00-1.00------1.00-----------1.00----------------------------1.00-----------------1.00-------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAT.....................................................................................2415.0044.00-----------------------------------------------2.00------------1.00--------------1.00-------------------------------------------------------1.00---------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAG.....................................................................................2415.0044.00-------------------------2.00-------------------------1.00----------------------------------------1.00---------------------------1.00--------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGT.......................................................................................2115.005.00------------------1.00---2.00---------------------------------------------------------------------------------------------------------------1.00-------------------1.00----
............................................................................................................................................ACCCACCAGGAGCCTGGCACCGT.......................................................................................2314.002.00----2.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAA..........................................................................................2013.002.00---------1.00------------------------------------1.00----------------------------------------------------------------------1.00-----------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTAG.....................................................................................2513.0032.00-------------------------------------1.00----------------------------------1.00-------------------------------------------------1.00------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCA...........................................................................................1912.002.00-------------------------------------1.00-----------------------1.00-------------------------------------------------------------------------------------------------
......................................................................................................AGACGGTAGGCATGTGTTCT................................................................................................................................202.000.00-2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTTT.....................................................................................2412.0044.00------------------------------------------1.00-------------------------------1.00------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAC..........................................................................................2012.002.00-----------------------------------------------------------------2.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................GTGGCCGCAGCACTGAGCAGTGC..................................................................2312.002.00------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CACCAGGAGCCTGGCACTGT.......................................................................................2012.002.00------------------------1.00-----------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCAC..........................................................................................2112.002.00--------------------------------1.00------------------------------------------------------------------------------------------1.00-----------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTA........................................................................................2211.008.00----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
............AGCTGTCCAGCCCCTCCGA...........................................................................................................................................................................................................................191.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................CTAAGGGGCAGACTGTTAG..................................................................................................................................................1911.001.00-----------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACCG........................................................................................2311.002.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAAA.........................................................................................2111.002.00------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAGA....................................................................................2511.0044.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGAA......................................................................................2211.001.00------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTTT....................................................................................2611.0032.00--------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGTA......................................................................................2211.005.00---------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................GAGCCTGGCACTGTGGCCG..................................................................................1911.001.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAGT....................................................................................2511.0044.00-----------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................................TGGCACTGTGGCCGCAGCACTGA.........................................................................2311.001.00--------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACAG........................................................................................2311.002.00-----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGAA......................................................................................2311.008.00--------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAC.....................................................................................2411.0044.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGA.......................................................................................2411.007.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................TAAGGGGCAGACTGTTAGACGGTAG...........................................................................................................................................2511.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACA.........................................................................................2211.002.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGA............................................................................................181.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTT.....................................................................................2511.0032.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................CCACCCACCAGGAGCCTGGCA...........................................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..............................................................................................AGACTGTTAGACGGTAGGCATGTGCTGAGT..............................................................................................................................3011.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCAAT.........................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTAAT......................................................................................2311.0013.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00------
...................................................................................................................................................AGGAGCCTGGCACTGCG......................................................................................171.000.00----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGTCT.....................................................................................2611.006.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTC......................................................................................2411.0032.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................ACCAGGAGCCTGGCACTGGGG.....................................................................................211.000.00-----------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCAA..........................................................................................211.000.00-------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
......................CCCCTGCCCCACCCTCTCGGCC..............................................................................................................................................................................................................221.000.00------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................ACCAGGAGCCTGGCACTGTGG.....................................................................................2111.001.00----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGAT......................................................................................2311.008.00--------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGTTA...........................................................................................181.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTATA......................................................................................2411.008.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGTT......................................................................................2211.005.00--------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGC.......................................................................................2211.008.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTGCCCCGTTTCTGTGGCA...................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GTCCCAGTGGCCACATGTC.............................................................................................................191.000.00-------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTCT....................................................................................2611.0032.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTATC....................................................................................2611.0032.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGC............................................................................................1911.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCATAG........................................................................................2211.002.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTGCCCCGTTTCTGTGGCAA..................................................2111.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAT..........................................................................................2011.002.00-------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
..............................................................................................AGACTGTTAGACGGTAGGCATG......................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACGG........................................................................................211.000.00------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGCA......................................................................................2411.0012.00-------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTG........................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTCT.....................................................................................2411.0044.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGTAC.....................................................................................2611.006.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGCTTCCCAGCAGCTGTCCAGCCCCTGCCCCACCCTCTCTGTGGGCTCCCTTGCCCGTAACCTGGGGTGTCTGAACGACCCTTGCTAAGGGGCAGACTGTTAGACGGTAGGCATGTGCTGAGTCCCAGTGGCCACACCCACCCACCAGGAGCCTGGCACTGTGGCCGCAGCACTGAGCAGTGCCCCGTTTCTGTGGCAGGTGTCCATACACTCCGTGTGGCTGGGGAACAGCATCACACCCCTGAGGGA
..............................................................................................................................................(((.(((((((..((((((((.((....)).....))))))))..)))))))))).....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577579(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................................................................................................CAGCATCACACCCCTGGAGA. 201.000.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................CTGAACGACCCTTGCTGGT................................................................................................................................................................ 191.000.00----------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.................TCCAGCCCCTGCCCCACACTG.................................................................................................................................................................................................................... 211.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................AGACGGTAGGCATG...................................................................................................................................... 1420.500.50-----------------------------0.50---------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CCTGGCACTGTGGCCG.................................................................................. 1630.330.33-------------------------------------------------------------------------------------------------------------------------------------------------------------0.33-
.........................................................................................GGGGCAGACTGTTA................................................................................................................................................... 1480.120.12--------------------------------------------------------------------------------------------------------------------------------------------------------------0.12