ID: uc010zyo.2
GENE: RNF114(2)
chr20:48562473-48562722+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(3)
BRAIN 		(15)
BREAST 		(24)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(6)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189782DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR343336SRR040043(GSM532928)
G428T. (cervix)		SRR189785SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577590(Rovira)
total RNA. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................83139.0039.0034.00-3.00----2.00-------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................84122.0022.0020.00-2.00------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGA....................................................................................21115.0015.00-1.00-2.004.00----1.00-2.00--------1.001.00---1.00--------------------1.00---------1.00------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................83114.0014.0013.00-----1.00--------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAA...................................................................................22113.0013.00---2.00-2.00---1.003.00---------1.00---------2.00------------------------------------------------------1.00--1.00----
..................................................................................................................................................AATGGAAAGGTACTCACAGAAA..................................................................................22110.0010.00---------1.00---2.00--------------1.00--------------1.001.00---------------1.00---1.00--1.00-----1.00-------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAA...................................................................................2119.009.00-----------------------2.001.00-----------1.00------------1.00------------1.00------1.00------------1.00-1.00--------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAG..................................................2119.009.00-8.00-------------------------------------------------------------------------1.00-----------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGT.................................................888.000.006.00-----2.00--------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8617.007.00--7.00------------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTT......................................................8217.007.007.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAG..................................................2017.007.00-6.00--------------1.00----------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAA.................................................................................2216.006.00---------1.00--1.00---------------------2.00----1.00---------------------------------------1.00-------------
..................................................................................................................................................AATGGAAAGGTACTCACAGA....................................................................................2016.006.00--------1.00----1.00--------------1.00------------------------------------------1.00--------1.00----------1.00-
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGT.................................................2116.007.00-4.00-----------------------------------1.00---------1.00---------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8116.006.00--6.00------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAA..................................................................................2315.005.00-----1.00------1.00--------1.00------------------------------1.00-----------------1.00----------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................8215.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8515.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCA...................................................8415.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGT...............................................................................2414.004.00----3.00-----------------------------------------------------1.00----------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGT...............................................................................2314.004.00-----------------------------2.00---------------1.00--------------------1.00--------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTT..............................................................................2414.004.00-----------1.00--------------------1.002.00-----------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGA.................................................2114.007.00--------------------------------------------------1.00---------------------1.00-1.00--1.00---------------
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................8214.004.004.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CCAAACCGTTACACCTTTCCTTG....................2313.003.00-------------------2.00-------------------------------------------1.00-----------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAG.....................................................................................2013.003.00-2.00---1.00---------------------------------------------------------------------------------------
........................................TTATTTTCACAACACTATG...............................................................................................................................................................................................193.000.00--------------3.00------------------------------------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGAA...................................................................................2313.003.00---3.00-----------------------------------------------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGA....................................................................................2213.003.00---3.00-----------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8013.003.003.00--------------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAA...................................................................................2013.003.00------------1.00------------1.00---------------1.00---------------------------------------------------
.....................................................................................................................................................................................CCTGTGTTTCACCTTCCAG..................................................1913.003.00-3.00-------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAA.................................................................................2113.003.00-------------------------------------------------------1.00----------------------1.00-----------1.00--
...................................................................................................................................................ATGGAAAGGTACTCACAG.....................................................................................1813.003.00----------------1.002.00---------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGTT................................................2212.007.00------------------------1.00-------------------------------------------------------------------1.00
..........................................................................................................................TGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................7612.002.00------2.00--------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAA..................................................................................2012.002.00------------------------------------------1.00--------------1.00-----------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................8612.005.002.00--------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTT.............................................................................2512.002.00--------2.00------------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGA.................................................2212.009.00--------------------------------------------------------------------1.00--------------------1.00---
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACC........................................................8012.002.00-------2.00-------------------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAG.....................................................................................1912.002.00-1.00-----------------------------------------------------------1.00-------------------------------
.........................................................................................................................................................................................................................ACACCTTTCCTTGTCCTTACTGTCCG.......261.000.00----------------------1.00----------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGTTT.............................................................................2611.001.00--------------------------1.00------------------------------------------------------------------
................................................................................................................TGCTCCTTTTTGGAGTGTACTGTGGTTG..............................................................................................................2811.001.00-----1.00---------------------------------------------------------------------------------------
............................................................................................................................GAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTG...............................................................6311.001.00-------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTTTCCTTGTCCTACTG............191.000.00----------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAAT.................................................221.000.00-----1.00---------------------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAA.....................................................................................191.000.00---------------------------1.00-----------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAGA..................................................................................2311.0015.00--------1.00------------------------------------------------------------------------------------
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................851.000.00-------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTTTCTT.........................................................................2911.001.00----------------------1.00----------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAAA.................................................................................2411.001.00---------1.00-----------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACT.....................................................................................................................1811.001.00-----------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................AGTTTTCTTTTTTCCGGTT...............................................................191.000.00-------------------------------1.00-------------------------------------------------------------
.............AACCACCACGCCCGGCCAGCTCCAC....................................................................................................................................................................................................................251.000.00-----------------------------------------------------1.00---------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCATAGA....................................................................................211.000.00----1.00----------------------------------------------------------------------------------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8211.001.00------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGA...2011.001.00---1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTC.........1911.001.00---------------------------------------------------------------------------------1.00-----------
......................GCCCGGCCAGCTGAGGCGG.................................................................................................................................................................................................................191.000.00--------------------------------1.00------------------------------------------------------------
................................CTGAGCTGTTATTTTGGGG.......................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGAAG.2211.001.00-----------------------------------------------------------------------------------1.00---------
...................................................................................................................................................ATGGAAAGGTACTCACAGA....................................................................................1911.001.00------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAAAA................................................................................241.000.00---------------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGT.................................................2211.009.00-1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAACCGTTACACCTTTCCTTGTCC.................2411.001.00--------------------------------------1.00------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAG..................................................................................2211.009.00------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAG................................................................................2211.001.00--------1.00------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAA...................................................................................1911.001.00-----1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTCCTGA.....2311.001.00----------------------------------------------------------------------------1.00----------------
.........................................................................................................................................................................................................AATGTTCCAAACCGTTACACCTTTCC.......................2611.001.00----------------------------------------1.00----------------------------------------------------
..................................................................................................................................................................................TTTCCTGTGTTTCACCTTCCAGT.................................................231.000.00-----1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTCCTTGTCCTTACTGTCCTGAGAAGA2711.001.00------------------------------------------------------1.00--------------------------------------
...TACAGGCGTAAACCACCACGCCCGGCCC...........................................................................................................................................................................................................................281.000.00-------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................TTCCAAACCGTTACACCTTTCCTTGA...................261.000.00-----------------------------------1.00---------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGA....................................................................................1811.001.00-----------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCA...................................................1920.500.50------------------0.50--------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTACACCTTTCCTTG....................1590.220.22-------------------0.11---------------0.11---------------------------------------------------------

Antisense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189782DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR343336SRR040043(GSM532928)
G428T. (cervix)		SRR189785SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577590(Rovira)
total RNA. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
............AAACCACCACGCCCGTGT............................................................................................................................................................................................................................ 182.000.00---------------2.00-----------------------------------------------------------------------------
............AAACCACCACGCCCGTGG............................................................................................................................................................................................................................ 181.000.00--------------------------1.00------------------------------------------------------------------
............AAACCACCACGCCCGCGG............................................................................................................................................................................................................................ 181.000.00---------------------------------------------------------------------------------------1.00-----
............AAACCACCACGCCCGGGTG........................................................................................................................................................................................................................... 191.000.00---------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................CCGTTACACCTTTCC....................... 1511.001.00------------------------------------------------1.00--------------------------------------------
....................................................................................................................................................................................................................................TGTCCTTACTGTCCTGCA.... 181.000.00-----------------------------------------------------------------1.00---------------------------
..................................................................................................................................ACTGTGGTTGAAGTTCTAA..................................................................................................... 191.000.00---------------------------1.00-----------------------------------------------------------------