ID: uc010wsc.11
GENE: CASKIN2(11)
chr17:73501961-73502435-


(1)
AGO1.ip 		(1)
AGO2.ip 		(2)
B-CELL 		(5)
BRAIN 		(7)
BREAST 		(17)
CELL-LINE 		(8)
CERVIX 		(9)
HEART 		(2)
HELA 		(6)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(30)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCGGCTGCTTCTGGAGGTGGGTATGGGCCCCTGCTCCCTCGCAGGTGTCCATGGAGCCTCTGCCCTGTGCCCCTGACTGGCTGGGGAGGTACGGGACGGAGGACTCCAGCGTGGTTTTTGCATGGGCGTCAGGAAAGAGGCCTGACTTCCTTCTGAATGGTGCCGAGGCGGTGCAGATGGATCGGGGGCAGACCAACCTGATTGGCACCCCAGATCTGCCTCTTACTAGCTGAGTGAACTTGAGCTTGTCCTTGACTGAGTCCCTGAGCCTCTATGTCCTCATCTGTAAAATCGGAAAATGGTAATAGTACCTATGTCCCGGGTAGCTGAGAGAATCGGGTGAGGGGTGTCAAAGTGCTTAGCGTGTGCTCATGTGACACTGTGCACCCAGGGAGGTGTGGACGTGAACATCCGGAATACGTATAACCAGACGGCGCTGGA
...................................................................................................................................................................................................................................................................................................................................................................................(((((...(((((((.(((((.......)))))....)))))))...)))))....................................................
................................................................................................................................................................................................................................................................................................................................................................................369.....................................................425................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040034(GSM532919)
G001N. (cervix)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCAGT.................................................23140.001.0014.00--2.00--3.00---1.00-1.003.00--1.00-2.00----1.00----1.00-1.00----1.00------1.00----1.00-------1.00-----1.00----------1.00-----1.00--1.00---1.00-1.00---
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCAGA.................................................23134.001.00---2.00--1.001.002.00-1.00-2.00-1.002.001.00--2.00----2.00--2.001.00-1.001.00-2.00------1.00---------1.00---1.00--1.00-1.001.00--------1.001.00----1.00-1.00-------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATCCGGAATACGTATAACCAGACGGC......3117.007.00----7.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................ATCGGGTGAGGGGTGTCAAAGTG....................................................................................2316.006.00-----6.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TCGGGTGAGGGGTGTCAAAGTGC...................................................................................2313.003.00------1.00------------------------------------------------------------------1.00--1.00--------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATACGTATAACCAGACGGCGCT...2613.003.00---1.00------1.00---------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................GATGGATCGGGGGCAGACCAAC....................................................................................................................................................................................................................................................2212.002.00-----------1.00--------------------------------------------------1.00----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACACTGTGCACCCAGT.................................................202.000.002.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCCGGAATACGTATA................1912.002.00-----------------2.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATCCGGAATACGTATAACCA............2512.002.00---1.00-------------------------1.00-------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTGGACGTGAACATCCGGAATACGT...................2912.002.00---------2.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGAATACGTATAACCAG...........2012.002.00-------2.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCGGAATACGTATAACCA............2212.002.00--------------------2.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGGAATACGTATAACCAGACGGCGCTGG.3211.001.00--1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................ATCGGGTGAGGGGTGTCAAAGTGC...................................................................................2411.001.00----------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................................CTAGCTGAGTGAACTTGAGC....................................................................................................................................................................................................2011.001.00--------------------------------1.00----------------------------------------------------------
..GAGGCCGCACTGTATGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATACGTATAACCAGACG........2111.001.00------------------------------------1.00------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATACGTATAACCAGACGGCG.....2411.001.00-----------------------------------------1.00-------------------------------------------------
................................GTGCGGCTGCTTCTGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----1.00--------------------------------------------------------------------------------------
..........................................TTCTGGAGGTGGGTATGGGCCCCTGCTCCCTC.................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00----------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCC....................................................2011.001.00-----------------------------------------------------1.00-------------------------------------
.........................................................................................................CCTGACTGGCTGGGGAGG................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00-------------------
.........................................................................................................................................................................AGAGGCCTGACTTCCTTCTGA.............................................................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------1.00------
.................................................................................................................................................................................................................................................................................................................................................................................TCGGGTGAGGGGTGTCAAAGT.....................................................................................2111.001.00-------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCGGAATACGTATAA...............1911.001.00-------------------------------------------------------------------------------1.00-----------
.................................................................................................................................................................................................................................................................................................................................................................................TCGGGTGAGGGGTGTCAAAGTG....................................................................................2211.001.00--------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCAGTT................................................2411.001.00--------------------------------1.00----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................CGGGTGAGGGGTGTCAAAGTGC...................................................................................2211.001.00-----------------------1.00-------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGTGGACGTGAACATCCGGAATACGT...................3111.001.00--1.00----------------------------------------------------------------------------------------
..............................TGGTGCGGCTGCTTCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00----
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCTGA.................................................2311.001.00--------------------------------------------------------------------1.00----------------------
...............................................................................................................................................................................................................CAGATGGATCGGGGGCAGACCAAC....................................................................................................................................................................................................................................................2411.001.00-----------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGACACTGTGCACCCAGT.................................................211.000.00---------------------1.00---------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCCGGAATACGTATAACC.............2311.001.00------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGTGTGGACGTGAA.................................1911.001.00--------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................ATGGATCGGGGGCAGACCAAC....................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------1.00------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGACACTGTGCACCCAGA.................................................221.000.00---1.00---------------------------------------------------------------------------------------
................TGGCAAGACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1431.001.00-----------------------------------0.67----------------------------------------------------0.33--
................................................................................GTCCATGGAGCCTCTGCCCTGT.....................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------1.00----------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGTGTGGACGTGAACATCC............................2311.001.00--1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATAACCAGACGGC......1611.001.00--------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATCCGGAATAC.....................1611.001.00-------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCA...................................................2111.001.00----------------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCAGTA................................................2411.001.00-------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAACATCCGGAATACGA...................201.000.00-------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGACACTGTGCACCCAG..................................................2211.001.00--------------------------------------------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAATACGTATAACCAGACGGCGCT...2711.001.00---1.00---------------------------------------------------------------------------------------
.........................................................................................................................GGTACGGGACGGAGGACTCCAGCGTTGTT.....................................................................................................................................................................................................................................................................................................................................291.000.00--1.00----------------------------------------------------------------------------------------
...AGGCCGCACTGTATGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00--------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGGACGTGAACATCCGGAATACGTATAAC..............3211.001.00--1.00----------------------------------------------------------------------------------------
...............................................................................................GCCCTGTGCCCCTGACTTG.........................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------1.00----------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TAAAATCGGAAAATGGTA.........................................................................................................................................1811.001.00-----------------------------1.00-------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATACGTATAACCAG...........1811.001.00---------------------------------------------------------------1.00---------------------------
........................................................................................................................AGGTACGGGACGGAGGACTCCAGCGTGG.......................................................................................................................................................................................................................................................................................................................................2811.001.00--1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ATCGGAAAATGGTAATAGTACCTATGT............................................................................................................................2711.001.00----------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GTAAAATCGGAAAATGGTAATAGTA...................................................................................................................................2511.001.00--------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................TGTAAAATCGGAAAATG............................................................................................................................................1711.001.00-------------------------------1.00-----------------------------------------------------------
...............................................................................................GCCCTGTGCCCCTGACTTGTG.......................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGTGTGGACGTGAACAT..............................2211.001.00---------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................GATGGATCGGGGGCAGACCCAC....................................................................................................................................................................................................................................................221.000.00-----------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTGGACGTGAACATCCGGAATACGTATAA...............3211.001.00--------------------------------------------------------------------------1.00----------------
.................................................................................................................................................................................................................................................................................................................................................................................TCGGGTGAGGGGTGTCAAAGTGA...................................................................................2311.001.00-----1.00-------------------------------------------------------------------------------------
......................GACCGAGGTGGTGCGGCTGCTTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00---------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGTGTGGACGTGAACATCCGGAATA......................3011.001.00--1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATAACCAGACGGCGCT...1911.001.00----------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGTGGACGTGAACATCCGGAATACG....................2911.001.00--------------1.00----------------------------------------------------------------------------
.................................TGCGGCTGCTTCTGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------1.00---------------------------------------------------------------------
.......................................................................................................................GAGGTACGGGACGGAGGACT................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------1.00---------------------------------------------
...........................................................................................................................................................................................................................................TTGGCACCCCAGATCTGCC.............................................................................................................................................................................................................................1911.001.00-------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................TGCAGATGGATCGGGGG.............................................................................................................................................................................................................................................................1730.670.67----------------------------------0.67--------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAATACGTA..................1250.200.20-----------------------------------------------------------------------------------------0.20-

Antisense strand
ACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCGGCTGCTTCTGGAGGTGGGTATGGGCCCCTGCTCCCTCGCAGGTGTCCATGGAGCCTCTGCCCTGTGCCCCTGACTGGCTGGGGAGGTACGGGACGGAGGACTCCAGCGTGGTTTTTGCATGGGCGTCAGGAAAGAGGCCTGACTTCCTTCTGAATGGTGCCGAGGCGGTGCAGATGGATCGGGGGCAGACCAACCTGATTGGCACCCCAGATCTGCCTCTTACTAGCTGAGTGAACTTGAGCTTGTCCTTGACTGAGTCCCTGAGCCTCTATGTCCTCATCTGTAAAATCGGAAAATGGTAATAGTACCTATGTCCCGGGTAGCTGAGAGAATCGGGTGAGGGGTGTCAAAGTGCTTAGCGTGTGCTCATGTGACACTGTGCACCCAGGGAGGTGTGGACGTGAACATCCGGAATACGTATAACCAGACGGCGCTGGA
...................................................................................................................................................................................................................................................................................................................................................................................(((((...(((((((.(((((.......)))))....)))))))...)))))....................................................
................................................................................................................................................................................................................................................................................................................................................................................369.....................................................425................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040034(GSM532919)
G001N. (cervix)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)
.................................................GGTGGGTATGGGCCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................... 1614.000.00-13.00-------------------------------------------------1.00---------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGTGCTTAGCGT............................................................................ 1711.001.00-------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................CCTATGTCCCGGGTAGCTGAG.............................................................................................................. 2111.001.00----------------------------------------------------1.00--------------------------------------
.................................................................TGCTCCCTCGCAGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................... 161.000.00-----------------------------------------------------------------------------------1.00-------
........................................................................................................................................................................................................................................................................................................................CTCATCTGTAAAATCTAAC................................................................................................................................................ 191.000.00-----------1.00-------------------------------------------------------------------------------
....................................................................................ATGGAGCCTCTGCCCTGTAGTT................................................................................................................................................................................................................................................................................................................................................................................. 221.000.00--------------------------------------------1.00----------------------------------------------
.............................................................CCCCTGCTCCCTCGCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------------------------------1.00------------------------------------------
............................................................................................................................................................................................................................................................................TGAACTTGAGCTTGTCCT............................................................................................................................................................................................. 1820.500.50------------------------------------0.50------------------------------------------------------
.............................................................................................................................................................................................................................................................................GAACTTGAGCTTGTCCT............................................................................................................................................................................................. 1730.330.33-------------------------------------0.33-----------------------------------------------------
.........................................................................................GCCTCTGCCCTGTGCCC................................................................................................................................................................................................................................................................................................................................................................................. 1750.200.20------------------------------------------------------------------------------------------0.20