ID: uc010dtt.14
GENE: ANKRD24(14)
chr19:4215775-4216024+


(2)
AGO1.ip 		(3)
AGO2.ip 		(2)
AGO3.ip 		(3)
B-CELL 		(9)
BRAIN 		(6)
BREAST 		(16)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(4)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(2)
OTHER 		(1)
OTHER.ip 		(9)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
AAAAAAAAAAAGTGGCACGGGGAGTGGGTGGCAAAGGACATGGAAGGTGCTCACTAAATCCTTGTGGGCCAAATGCAGCCATCTGGTGCTCGTGGGAGACATACAGGTATGTGAACAGCCCAGTCCCCACTGGAGTCTTGGTGGGGACACACGGGGGCTGAGAGCAGAACCCCGAGCTGGACTCTGCTCCCTCCCCCCAGAACGAGCGGGAGAATACTAGCTATGACGTAACCACCCTGCAGGATGAGGA
........................................................................................................................................................(((((....(((((((..((......))..)))))))....)))))....................................................
.................................................................................................................................................146...................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR189784DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343334GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189782GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
......................................................................................................................................................ACGGGGGCTGAGAGCAGAACC...............................................................................21128.0028.0014.004.001.00--1.00-1.00-1.002.00--1.00------1.00--------------------1.00-----------1.00-----------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAACC...............................................................................22114.0014.005.00-1.003.00-1.001.00----1.00----------1.00------------------------------------1.00-----
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAAC................................................................................21114.0014.002.005.002.00----1.00-----------1.00-1.00---------1.00--------------------------1.00------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAAC................................................................................22110.0010.003.001.001.00-5.00------------------------------------------------------------
......................................................................................................................................................ACGGGGGCTGAGAGCAGAACCC..............................................................................22110.0010.004.00----2.001.00-----3.00----------------------------------------------------
......................................................................................................................................................ACGGGGGCTGAGAGCAGAAC................................................................................2018.008.003.00-1.00------------1.00--------------1.00-----1.00-------------------------1.00--
.....................................................................................................................................................CACGGGGGCTGAGAGCAGA..................................................................................1918.008.00---2.00-1.00-1.00----------------1.001.00-1.00-----------------1.00-------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGA..................................................................................2018.008.002.00-1.001.00---------1.00--1.00--1.00----------------------------------------1.00----
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCAGT.................................................218.000.00-------------1.003.001.00------------------1.001.00--1.00--------------------------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCAGA.................................................2117.007.001.00-3.00------1.00----------1.00------------------------------1.00-------------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAA.................................................................................2016.006.001.001.001.00--------1.00----1.00------------------------------1.00-----------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAA.................................................................................2115.005.002.00---------------------1.00--------------1.00----1.00----------------------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAAA................................................................................2113.006.001.00-1.00---------------------------------------------------1.00----------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCAGAA................................................2212.002.00------1.00--------------------------------1.00-------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAAAAA..............................................................................2412.005.00---2.00-------------------------------------------------------------
......................................................................................................................................................ACGGGGGCTGAGAGCAGAACA...............................................................................2112.008.00-----------1.00--------------------------------------------1.00--------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAACCC..............................................................................2312.002.00---------1.00-------------1.00-----------------------------------------
..................................................................................................................................................................AGCAGAACCCCGAGCAGTC.....................................................................1911.001.00---------------------------------------------------------1.00-------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCAGAAGA..............................................2411.002.00--1.00--------------------------------------------------------------
................ACGGGGAGTGGGTGGCACA.......................................................................................................................................................................................................................191.000.00---------------------------------1.00-------------------------------
...........................................................................................................................................................................................TCCCTCCCCCCAGAAGCCC............................................191.000.00-----------------1.00-----------------------------------------------
......................................................................................................................................................ACGGGGGCTGAGAGCAGAAA................................................................................201.000.00-1.00---------------------------------------------------------------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCA...................................................1911.001.00----------1.00------------------------------------------------------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCCAGATT...............................................2311.007.00--------------------------------------------------1.00--------------
...................................................................................TGGTGCTCGTGGGAGACT.....................................................................................................................................................181.000.00------------------------------------------------1.00----------------
............................................................................................................................................................................................................AGCGGGAGAATACTAGCTATGACG......................2411.001.00----------------------------------------------1.00------------------
.......................................................................................................................................................CGGGGGCTGAGAGCAAAGC................................................................................191.000.00--------1.00--------------------------------------------------------
...................................................................................................................................................................................GACTCTGCTCCCTCCCCCAG...................................................201.000.00------------------1.00----------------------------------------------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAACA...............................................................................2211.0014.00-1.00---------------------------------------------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAACC...............................................................................2311.001.00---1.00-------------------------------------------------------------
..............................................................................................................................................................................................................CGGGAGAATACTAGCC............................161.000.00-------------------------------------------1.00---------------------
............................................................................................TGGGAGACATACAGGTATGTGAACA.....................................................................................................................................2511.001.00----------------------------------------1.00------------------------
......................................................................................................................................................ACGGGGGCTGAGAGCAGAAAAA..............................................................................221.000.00----------------------------1.00------------------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAACCC..............................................................................2411.001.001.00----------------------------------------------------------------
..................................................................................................................................................................AGCAGAACCCCGAGCAGT......................................................................1811.001.00---------------------------------------------------------------1.00-
..................................................................................................................................................................AGCAGAACCCCGAGC.........................................................................1511.001.00---------------------1.00-------------------------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAACT...............................................................................2311.0010.00-------1.00---------------------------------------------------------
...................................................................................................................................................CACACGGGGGCTGAGAGCAGAAT................................................................................231.000.00------1.00----------------------------------------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGAATAT..............................................................................2411.005.00-----------------------------1.00-----------------------------------
.....................................................................................................................................................CACGGGGGCTGAGAGCAAA..................................................................................191.000.00---------------1.00-------------------------------------------------
....................................................................................................................................................ACACGGGGGCTGAGAGCAGGAC................................................................................221.000.00----1.00------------------------------------------------------------
.....................................................................................................................................................CACGGGGGCTGAGAGCAGAACCAA.............................................................................2411.0014.00----------------1.00------------------------------------------------
...............................................................................................................................................GGGACACACGGGGGCATT.........................................................................................181.000.00-------------------------------------------------1.00---------------
..................................................................................................................................................................AGCAGAACCCCGAGCAG.......................................................................1711.001.00--------------------------------1.00--------------------------------
....................................................................................................................................................................................ACTCTGCTCCCTCCCCCGAGT.................................................211.000.00-------------------------------------------------------1.00---------
.............................................................................................................................................................................................................................TATGACGTAACCACCCTGCAGGATGAGG.2811.001.00----------------------------------------------------1.00------------
..................................................................................................................................................................AGCAGAACCCCGAG..........................................................................1440.250.25----------------------------------------------------------------0.25
....................................................................................................................................................ACACGGGGGCTGAG........................................................................................1480.120.12--------0.12--------------------------------------------------------

Antisense strand
AAAAAAAAAAAGTGGCACGGGGAGTGGGTGGCAAAGGACATGGAAGGTGCTCACTAAATCCTTGTGGGCCAAATGCAGCCATCTGGTGCTCGTGGGAGACATACAGGTATGTGAACAGCCCAGTCCCCACTGGAGTCTTGGTGGGGACACACGGGGGCTGAGAGCAGAACCCCGAGCTGGACTCTGCTCCCTCCCCCCAGAACGAGCGGGAGAATACTAGCTATGACGTAACCACCCTGCAGGATGAGGA
........................................................................................................................................................(((((....(((((((..((......))..)))))))....)))))....................................................
.................................................................................................................................................146...................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR189784DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343334GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189782GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.........................................................................................................................................................................................................ACGAGCGGGAGAATAGTAA.............................. 191.000.00------------------1.00----------------------------------------------
..............................................................................CCATCTGGTGCTCGTGTG.......................................................................................................................................................... 181.000.00--------------------------1.00--------------------------------------
......................................................................................................................................................................................TCTGCTCCCTCCCCCCAA.................................................. 181.000.00-------------------------------------------------------------1.00---
......................................................................................................................................GTCTTGGTGGGGACACAG.................................................................................................. 181.000.00-----------------1.00-----------------------------------------------
......................................................................................................................................................................................................................TACTAGCTATGACGTACAG................. 191.000.00--------------------------------------------1.00--------------------
..........................................................................................................................................................................................CTCCCTCCCCCCAGAAGG.............................................. 181.000.00--------1.00--------------------------------------------------------
..........................................................................................................................................................................................CTCCCTCCCCCCAGAAGGAG............................................ 201.000.00--------1.00--------------------------------------------------------