ID: uc010cyj.9
GENE: COASY(9)
chr17:40717774-40717973+


(2)
AGO1.ip 		(2)
AGO2.ip 		(2)
AGO3.ip 		(12)
B-CELL 		(1)
BRAIN 		(3)
BREAST 		(23)
CELL-LINE 		(1)
CERVIX 		(4)
HELA 		(2)
LIVER 		(1)
OTHER 		(3)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GCCACGTGGTGCTCAGCACCTTGTGGGAGCCGCATATCACCCAACGCCAGGTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAGGTGGAGAAAGCCTGGGCCCTCTTGCAGAAGCGCATTCCCAAGACTCATCA
.............................................................((((.((((((((.(((.((((.((((........((((........))))........)))).)))).))).))))))))))))......................................................
............................................................61.......................................................................................150................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189786DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038854(GSM458537)
MM653. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR189785SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR038861(GSM458544)
MM466. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................AAGGCCGGGTTGTGGGGAAGGAT................................................................................................................23110.0010.00--1.00---2.00-2.00--------1.00------1.00--1.00-1.00--------------1.00----------
.................................................................AAGGCCGGGTTGTGGGGAAGGA.................................................................................................................22110.0010.00-1.001.002.00-----3.00-----1.00-------1.00----1.00--------------------------
..............................................................................................................................................................AGCCTGGGCCCTCTTGCAGAAGCGC.................2518.008.008.00------------------------------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGGA.................................................................................................................2317.007.00----1.00---------2.00------1.00--------1.00-1.00-------------------1.00--
................................................................CAAGGCCGGGTTGTGGGGAAG...................................................................................................................2116.006.00-1.00-----3.001.00--------------1.00-------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGAA................................................................................................................2316.0010.00----------3.003.00-------------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGATT...............................................................................................................2414.0010.00-------------3.00----------------------------1.00------------
................................................................CAAGGCCGGGTTGTGGGGAAGGT.................................................................................................................2313.002.00-2.00-----------------------------------------1.00-----------
....................................................................................................ACTGCCTGACCCTGCCGGG.................................................................................193.000.00----------------2.00---1.00----------------------------------
.............................................................................................................................................................AAGCCTGGGCCCTCTTGCAGA......................2113.003.00----1.00-----------------------------------------1.00--1.00-----
............................................................................................................................CTCCCAACATCCTGGCCTGTCT......................................................2212.002.00------------------2.00------------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGG..................................................................................................................2212.002.00---1.00--1.00------------------------------------------------
............................................................AGGGCAAGGCCGGGTTGTGGGGATA...................................................................................................................252.000.00-------------------2.00-----------------------------------
....................................TCACCCAACGCCAGGAGC..................................................................................................................................................181.000.00-----1.00-------------------------------------------------
...........................................................................................................................................................GAAAGCCTGGGCCCTCTTGCAGAAGCGCATTC.............3211.001.00-------------------------1.00-----------------------------
............................................................................................................................................................AAAGCCTGGGCCCTCTTGCAGAA.....................2311.001.00----------------------------------1.00--------------------
................................................................................................................................CAACATCCTGGCCTGTCTGAAG..................................................2211.001.00-----------------------------------------------------1.00-
...............................................................................................................................................................GCCTGGGCCCTCTTGCGGCT.....................201.000.00---------------------------------------1.00---------------
.........................................................................GTTGTGGGGAAGGAGCTAC............................................................................................................191.000.00-------------------------------------1.00-----------------
................................................................CAAGGCCGGGTTGTGGGGAAT...................................................................................................................211.000.00-------------------------------1.00-----------------------
...............................................................................................................................................................................AGAAGCGCATTCCCAAGACTCAT..2311.001.00-----------------------------------1.00-------------------
................................................................CAAGGCCGGGTTGTGGGGACTGA.................................................................................................................231.000.00---------------------1.00---------------------------------
...................................................................................................................................................................................GCGCATTCCCAAGACTCATCA2111.001.00---------------------------------------------1.00---------
.................................................................AAGGCCGGGTTGTGGGGAA....................................................................................................................1911.001.00---------------------------------------------------1.00---
..................................................................AGGCCGGGTTGTGGGGAAGGAT................................................................................................................221.000.00----------------------------------------1.00--------------
................................................................CAAGGCCGGGTTGTGGGGAAGGTT................................................................................................................2411.002.00----1.00--------------------------------------------------
.................................................................AAGGCCGGGTTGTGG........................................................................................................................1521.001.00----------------------1.00--------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGATAAA.............................................................................................................2611.0010.00------------------------1.00------------------------------
.....................................................................................................CTGCCTGACCCTGCCGG..................................................................................171.000.00--------------------1.00----------------------------------
.................................................................................................................................................................CTGGGCCCTCTTGCAGAAGCG..................2111.001.00---------------------------------1.00---------------------
.................................................................AAGGCCGGGTTGTGGGGAAG...................................................................................................................2011.001.00--1.00----------------------------------------------------
.........................................................................................................................................................................TCTTGCAGAAGCGCATTCCC...........2011.001.00------------1.00------------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGAAA...............................................................................................................2411.0010.00---------------1.00---------------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGGATA...............................................................................................................2511.007.00--1.00----------------------------------------------------
..................................................GTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAG..................................................10011.001.00--------------------------1.00----------------------------
...................................................................................................TACTGCCTGACCCTGCCGGG.................................................................................201.000.00------------------------------------------------1.00------
................................................................CAAGGCCGGGTTGTGGGGATGGA.................................................................................................................231.000.00----1.00--------------------------------------------------
...........................................................................................................................................................GAAAGCCTGGGCCCTCTTGCAGAT.....................241.000.00--------------------------------------1.00----------------
............................................................................................................................CTCCCAACATCCTGGCCTGT........................................................2011.001.00---1.00---------------------------------------------------
.................ACCTTGTGGGAGCCGCATATA..................................................................................................................................................................211.000.00------------1.00------------------------------------------
..................................................................AGGCCGGGTTGTGGGGAAGGAGTCTC............................................................................................................2611.001.00-----------------1.00-------------------------------------
................................................................................................................................................................CCTGGGCCCTCTTGCAGAAGCGCAT...............2511.001.00------------------------------------1.00------------------
...........................................................................................................................CCTCCCAACATCCTGGCCTGT........................................................2111.001.00-----------------------------------------1.00-------------
...............................................................................................................................CCAACATCCTGGCCTGTCTGAT...................................................221.000.00--------------------------------------------------1.00----
........GTGCTCAGCACCTTGTGGGAGCCGCA......................................................................................................................................................................2611.001.00------------1.00------------------------------------------

Antisense strand
GCCACGTGGTGCTCAGCACCTTGTGGGAGCCGCATATCACCCAACGCCAGGTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAGGTGGAGAAAGCCTGGGCCCTCTTGCAGAAGCGCATTCCCAAGACTCATCA
.............................................................((((.((((((((.(((.((((.((((........((((........))))........)))).)))).))).))))))))))))......................................................
............................................................61.......................................................................................150................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189786DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038854(GSM458537)
MM653. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR189785SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR038861(GSM458544)
MM466. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
....................................TCACCCAACGCCAGGTGCAG................................................................................................................................................ 201.000.00-----1.00-------------------------------------------------
...........................................................................................................................CCTCCCAACATCCTGGCCTTGA....................................................... 221.000.00-----1.00-------------------------------------------------
..........................................................................................................................TCCTCCCAACATCCTGGCCT.......................................................... 2011.001.00----------------------1.00--------------------------------
..................................................................AGGCCGGGTTGTGGGGAATGA................................................................................................................. 211.000.00-----1.00-------------------------------------------------
.................................................................................................................................AACATCCTGGCCTGTTGTG.................................................... 191.000.00-----------------------------------------------1.00-------
.................................................................................................................GCCCTCTCTTCCTCCCA...................................................................... 1770.140.14------------------------------------------------------0.14