ID: uc003mwv.1
GENE: F13A1(1)
chr6:6152133-6152382-


(2)
B-CELL
(3)
BRAIN
(9)
BREAST
(4)
CELL-LINE
(2)
CERVIX
(4)
HEART
(1)
LIVER
(3)
OTHER
(38)
SKIN
(1)
TESTES
(3)
UTERUS

Sense strand
GCGATTCTAATTAGTAAATTTCCATCTCTTTCTCAATAGGTATCCTCCAGTCAAAGCAATCAGCTATCCTCATCACACTGGTTCCATTGCCAAAAAAATAACTGTATCATAAAACTCTAGTAAAAGTGATGATGGTTAAGACAACAAGAGAGCAGAACGAGGTTTTATTTGGTGCTAATGACCTGCATTCTCTCTCTTAGGTCCGTGGCACTCAGGTAGTTGGTTCTGACATGACTGTGACAGTTGAGTT
.................................................................................................................................................(((((((.((((..(((((....(((....))).)))))...)))))))))))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577589(Rovira)
total RNA. (breast)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577738(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................................AACAAGAGAGCAGAACGAGGTT......................................................................................22117.0017.00-3.001.00------1.00--1.00--1.00---2.00--1.00---1.00-1.00--1.00---1.00--1.00------1.001.00--------------------------
...............................................................................................................................................ACAAGAGAGCAGAACGAGGTT......................................................................................21110.0010.002.00----1.00----1.00-----------1.00------1.00------------------1.00------1.00---1.00--1.00----------
..................................................................................................................................................................................TGACCTGCATTCTCTCTCTTAGA.................................................2317.005.00---1.00---------1.00------------------1.00------1.00----------1.00-----1.00-1.00--------------
...............................................................................................................................................ACAAGAGAGCAGAACGAGGTTT.....................................................................................2216.006.001.00----------2.00-------------1.00---------------------------1.00---------1.00---------
..................................................................................................................................................................................TGACCTGCATTCTCTCTCTTAG..................................................2215.005.00-----------------1.00-----1.002.00-----------------------------1.00------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAGGTTA.....................................................................................2315.0017.00-1.00-----1.00----1.00----1.00---------------------------------------1.00---------------
...............................................................................................................................................ACAAGAGAGCAGAACGAGGTTTT....................................................................................2313.003.001.00---------------------------------------1.00----------------------------1.00---
..................................................................................................................................................................................TGACCTGCATTCTCTCTCTTAGT.................................................2312.005.002.00------------------------------------------------------------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAG.........................................................................................1912.002.00--------------------2.00----------------------------------------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAGGTTTT....................................................................................2412.002.00--2.00----------------------------------------------------------------------
.........................................................................................................................................................................................................................AGTTGGTTCTGACATGAC...............1812.002.00-----2.00-------------------------------------------------------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAGGTTAA....................................................................................2412.0017.00------1.00--1.00---------------------------------------------------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAGGTTT.....................................................................................2312.002.00----------1.00----------------------------------------1.00---------------------
.........................................................................................................................................................................................................................AGTTGGTTCTGACATGACTGT............2112.002.00---2.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................TTGGTTCTGACATGACTGTGACAGT......2512.002.00------1.00-----------------------------------1.00------------------------------
.................................................................................................................................................AAGAGAGCAGAACGAGGTTA.....................................................................................202.000.00--------------2.00----------------------------------------------------------
...........................................................................................................................................................................................................................TTGGTTCTGACATGAC...............1621.501.50-------------------------0.50---------------1.00-------------------------------
.......................................................................................................................................................................................................................................TGACTGTGACAGTTGAGT.1811.001.00------------------------------------------------------------------1.00------
..........................................................................................................................................................................................................CCGTGGCACTCAGGTAGTTGG...........................2111.001.00----1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................TGACATGACTGTGACAG.......1711.001.00------------------------------------1.00------------------------------------
...................................................................................................................................................................................................................TCAGGTAGTTGGTTCTGACATGACTGTGACAGT......3311.001.00----1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................AGGTAGTTGGTTCTGACATGACTGTG...........2611.001.00----1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................TCAGGTAGTTGGTTCTGACA...................2011.001.00-------------------------------------------------------------1.00-----------
.........................................................................................................................AAAAGTGATGATGGTGCAG..............................................................................................................191.000.00-----------------------------------------------1.00-------------------------
..........................................................................................................TCATAAAACTCTAGTGGGC.............................................................................................................................191.000.00-------------1.00-----------------------------------------------------------
........................................................................................................................TAAAAGTGATGATGGTTGAGA.............................................................................................................211.000.00---------------------1.00---------------------------------------------------
..............................................................................................................................................AACAAGAGAGCAGAACGAGGT.......................................................................................2111.001.00---------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................CAGGTAGTTGGTTCTGACACT.................211.000.00--1.00----------------------------------------------------------------------
..............................................................................................................................................................................................................................GTTCTGACATGACTGTGACAG.......2111.001.00--------------------------------------------1.00----------------------------
.............................................................................................................................................................................................................TGGCACTCAGGTAGTTGGTTCTGACA...................2611.001.00--------1.00----------------------------------------------------------------
..........................................................................................................................................................................................................CCGTGGCACTCAGGT.................................1511.001.00------------------------------------------------------------1.00------------
...........................................................................................................................................................................................................................TTGGTTCTGACATGACTGTGACAGTT.....2611.001.00---------------------------1.00---------------------------------------------
...................................................................................................................................................................................................................TCAGGTAGTTGGTTCTGGGGT..................211.000.00---------------1.00---------------------------------------------------------
..................TTTCCATCTCTTTCTCCAAG....................................................................................................................................................................................................................201.000.00----------------------------------------------------------------1.00--------
...............................................................................................................................................ACAAGAGAGCAGAACGAGGTTA.....................................................................................2211.0010.00---------------------------------1.00---------------------------------------
.....................................................................................................................................................................................................................AGGTAGTTGGTTCTGACG...................181.000.00-------------------------------------------------------------------1.00-----
...........................................................................................................................................................................................................................TTGGTTCTGACATGACTGTGACAG.......2411.001.00--------1.00----------------------------------------------------------------
...............................................................................................................................................ACAAGAGAGCAGAACGAGGT.......................................................................................2011.001.00-----------------------1.00-------------------------------------------------
.................................................................................................................................................AAGAGAGCAGAACGAGGTTTT....................................................................................2111.001.00------------------1.00------------------------------------------------------
.............................................TCCAGTCAAAGCAATCAGCTATCCTCA..................................................................................................................................................................................2711.001.00--------------------------------------------------------------------1.00----
............................................................................................................................................................................................................................TGGTTCTGACATGACTGTGACAGTTCAG..281.000.00-------------------------------------------1.00-----------------------------
................................................................................................................................................CAAGAGAGCAGAACGAGGAAA.....................................................................................211.000.00------------------1.00------------------------------------------------------
............................................................................................................................................................................................................GTGGCACTCAGGTAGTTGG...........................1911.001.00-------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................................................GTAGTTGGTTCTGACATGACT..............2111.001.00-------1.00-----------------------------------------------------------------
......................................................................................................................................................................................................................GGTAGTTGGTTCTGACATG.................1911.001.00-------------------------------------1.00-----------------------------------
...............................................................................................AAATAACTGTATCATAAAGATT.....................................................................................................................................221.000.00------------------------------1.00------------------------------------------
...................................................................................................................................................GAGAGCAGAACGAGGT.......................................................................................1630.330.33----------------------------------------------------------------------0.33--
................................................................................................................................................................................................................................TCTGACATGACTGTGAC.........1730.330.33---0.33---------------------------------------------------------------------
.......................................................................................................................................................................................................................................TGACTGTGACAGTTG....1560.170.17------0.17------------------------------------------------------------------
...........................................................................................................................................................................................................CGTGGCACTCAGGT.................................1470.140.14-------0.14-----------------------------------------------------------------

Antisense strand
GCGATTCTAATTAGTAAATTTCCATCTCTTTCTCAATAGGTATCCTCCAGTCAAAGCAATCAGCTATCCTCATCACACTGGTTCCATTGCCAAAAAAATAACTGTATCATAAAACTCTAGTAAAAGTGATGATGGTTAAGACAACAAGAGAGCAGAACGAGGTTTTATTTGGTGCTAATGACCTGCATTCTCTCTCTTAGGTCCGTGGCACTCAGGTAGTTGGTTCTGACATGACTGTGACAGTTGAGTT
.................................................................................................................................................(((((((.((((..(((((....(((....))).)))))...)))))))))))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577589(Rovira)
total RNA. (breast)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577738(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................TGGTTCCATTGCCAAACAC......................................................................................................................................................... 191.000.00----------------1.00--------------------------------------------------------
..................................................................................................................................................................TTTTATTTGGTGCTATCGG..................................................................... 191.000.00----------------------------------1.00--------------------------------------
............................................................................................AAAAAATAACTGTATCTC............................................................................................................................................ 181.000.00-----------------------------------------------------------------1.00-------
..............................................................................TGGTTCCATTGCCAAACACT........................................................................................................................................................ 201.000.00----------------1.00--------------------------------------------------------
...........................................................................................................................AAGTGATGATGGTTAAAG............................................................................................................. 181.000.00----------------------------------------------------1.00--------------------
......................................GGTATCCTCCAGTCA..................................................................................................................................................................................................... 1530.330.33-----------------------------------------------------------------------0.33-
.........................CTCTTTCTCAATAGG.................................................................................................................................................................................................................. 15100.100.10------------------------------------------------------------------------0.10