ID: uc003lam.6
GENE: H2AFY(6)
chr5:134705783-134706032-


(1)
AGO1.ip
(2)
AGO2.ip
(10)
B-CELL
(14)
BRAIN
(9)
BREAST
(29)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
KIDNEY
(8)
LIVER
(3)
OTHER
(16)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
GCATTGGACCTGGGGCTTCCTAGGTCCCACTCAGCTTTGCCATTCAGCACCTCTGTGACTCTGCCCACAGCTTTTCACCTCAGGGTAGCTGCTTCCTGAAGCAGCTGCCTCTGCCCATTCCTGGCACTGTGAATGTGGGGACCGGGGCGGGGACACATGGTCCTCTAACATGACCATACACTCATCTCTGCTCCCCACAGCGGAGATTCTGGAGCTGGCTGGCAATGCAGCGAGAGACAACAAGAAGGGA
.....................................................................................................................................((((((((.(((((..(((....((((((.........))))))...)))..))))).))))))))...................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189786DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189787SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029128(GSM416757)
H520. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR189782SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCAC....................................................23120.0020.003.00-------3.002.00--1.00--1.00------1.001.00--2.00---1.00--1.00---------------1.00-------------------------------------------1.001.00-1.00---------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCAT....................................................23113.006.00------5.002.00----1.00-----------1.00---------------------------1.00---1.00--------1.00-------------------1.00--------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGGC...........................23113.0013.00--9.00-----------1.00-----1.00----2.00--------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACA...................................................24112.0012.003.00---1.00--2.00----1.00------2.00-------1.00---1.00-----------------------------------------------1.00--------------------------
........................................................................................................................................GGGGACCGGGGCGGGGT.................................................................................................1711.000.00-11.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCA.....................................................2216.006.00----1.00----1.00---------------------------1.00--------------------1.00-------1.00-----------------1.00---------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACT...................................................2415.0020.00---------1.00-----1.00--------------------------------------------1.00-----------1.00--1.00------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCTGGC...........................2515.005.00----------------------1.00------1.00----------1.00-1.00----------------------------------1.00----------------------------
....................................................................................................................................ATGTGGGGACCGGGGCGGGGACACA.............................................................................................2514.004.004.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ACTCATCTCTGCTCCCCACAG..................................................2114.004.004.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TACACTCATCTCTGCTCCCCACA...................................................2314.004.003.00-----------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................ATGTGGGGACCGGGGCGGGGAC................................................................................................2214.004.001.00----------1.00--------1.00-----------------------------------------------------1.00-------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCC......................................................2114.004.00------------------------1.00---------1.00---------------------------------------------------1.00-----1.00-------------
....................................................................................................................................................................................CTCATCTCTGCTCCCCACAGA.................................................213.000.002.00----------------------------------------1.00----------------------------------------------------------------
................................................................................................................................................................................TACACTCATCTCTGCTCCCCACAG..................................................2413.003.002.00----------------------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCAA....................................................2313.006.00--------------------------------1.00----1.00-----1.00--------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCC.......................................................2013.003.00----------------------------1.00------------------1.00----------------------------------------1.00-----------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACAGA.................................................263.000.002.00-------------------------------------------------------------1.00-------------------------------------------
..................................................................................................................................................................................CACTCATCTCTGCTCCCCACAGA.................................................2313.002.002.00----------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................CTCATCTCTGCTCCCCACAGTT................................................222.000.00---------------------------------------------------------1.00---------------1.00--------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTG.............................2112.002.00-------------2.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................CACTCATCTCTGCTCCCCACAG..................................................2212.002.002.00---------------------------------------------------------------------------------------------------------
.....................................................................................................................................TGTGGGGACCGGGGCGGGGACACATG...........................................................................................2612.002.00------------------2.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTGG............................2312.002.00---2.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACAA..................................................2512.0012.00---------------1.00---------------------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGGCAAT........................2612.002.00---2.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGATTCTGGAGCTGGCTGGCA..........................2112.002.00---1.00-------------------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................TCTGGAGCTGGCTGGCAATG.......................2012.002.00-------------1.00-------------------------1.00------------------------------------------------------------------
........................................................................................................................................GGGGACCGGGGCGGGTT.................................................................................................172.000.00-2.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TACACTCATCTCTGCTCCCCA.....................................................2112.002.00------------------------------------------------------1.00-------------------------1.00-------------------------
.............................................................................................................................................................................................................ATTCTGGAGCTGGCTGGCAATGCAGCGAG................2912.002.00-----------1.00---------------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................TGGAGCTGGCTGGCAATG.......................1831.331.33------------------------------------------0.670.33-------------------------------------------------------0.33------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCT.....................................................2211.004.00------------------------------------1.00---------------------------------------------------------------------
...............................................................................TCAGGGTAGCTGCTTCCTG........................................................................................................................................................1911.001.00----------------------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................................................GAGATTCTGGAGCTGGCTGGCAATGCAG....................2811.001.00--------------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................TACACTCATCTCTGCTCCCCATT...................................................2311.002.00---------------------------------1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................TGGAGCTGGCTGGCAATGCAGCGAGAGAC............2911.001.00----------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TTCTGGAGCTGGCTGGCAATGCA.....................2311.001.00------------------------------------------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................ATTCTGGAGCTGGCTGGCAATGCAGCGAGAGA.............3211.001.00---------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCG..............................2111.001.00-----------------------1.00----------------------------------------------------------------------------------
....................................................................................................................................ATGTGGGGACCGGGGCGGA...................................................................................................191.000.00-----------------------------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACG...................................................2411.0020.00---------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCTGGCAAT........................2811.001.00----------------------------------------------1.00-----------------------------------------------------------
.................................................................................................................................................................................ACACTCATCTCTGCTCCCCACAGA.................................................241.000.00-----------------------------------------------------------1.00----------------------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCT..............................2211.001.00--------------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................................CAGCGAGAGACAACAAGAAGGGA2311.001.00--------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................TGTGGGGACCGGGGCGGGGACACAT............................................................................................2511.001.00---------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................................................CTGGAGCTGGCTGGCAACT.......................191.000.00-----------------------------------------------------------------------------------------------1.00----------
..................................................................................................................................................................................................................GGAGCTGGCTGGCAACAAT.....................191.000.00----1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ACTCATCTCTGCTCCCCACAGA.................................................2211.004.00--------------------------------------------1.00-------------------------------------------------------------
...........................................................................................................................................GACCGGGGCGGGGACAAGA............................................................................................191.000.00---------------------------------------------------------------------1.00------------------------------------
..................................................................................................................................................................................CACTCATCTCTGCTCCCCACA...................................................2111.001.00-----1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GGAGATTCTGGAGCTGGCTGGCAA.........................2411.001.00---1.00------------------------------------------------------------------------------------------------------
......................................................................................................................TCCTGGCACTGTGAATTCTG................................................................................................................201.000.00----------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTGGCAATGCA.....................3011.001.00-----1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGGCA..........................2411.001.00----------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCACTT.....................................................221.000.00--------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTGGCAAT........................2711.001.00----------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................TACACTCATCTCTGCTCCCCAT....................................................2211.002.00---------------------------------------------------------------1.00------------------------------------------
...............................................................................................................................................................................................................TCTGGAGCTGGCTGGCAA.........................1811.001.00-----------------------------------------------------------------------------------------1.00----------------
..............................................................................................................................................................................................................TTCTGGAGCTGGCTGGCAATGC......................2211.001.00-----------------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................................ACAGCGGAGATTCTGGAGCTGGCTG.............................2511.001.00-----------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACAC..................................................2511.0012.00--------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................GATTCTGGAGCTGGCTGGCA..........................2011.001.00----1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGATTCTGGAGCTGGCTGGC...........................2011.001.00--------------------------------------------------------------------------------------------------1.00-------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGG............................2211.001.00--------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................CTGGCACTGTGAATGGAGC...............................................................................................................191.000.00----------1.00-----------------------------------------------------------------------------------------------
.......................................................TGACTCTGCCCACAGAG..................................................................................................................................................................................171.000.00----------------------------------------------------------------1.00-----------------------------------------
...............................................................................................................................................................................................................................AATGCAGCGAGAGACAAC.........1811.001.00---------------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................................................................................TGGAGCTGGCTGGCA..........................1501.001.00-----------1.00----------------------------------------------------------------------------------------------
...................................................................................................................................AATGTGGGGACCGGGGCGGGGACACACGG..........................................................................................291.000.00-----------------------------------1.00----------------------------------------------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCTGG............................2411.001.00----1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTGGC...........................2411.001.00-------------------------------------------------------------------------------------------------1.00--------
........................................................................................................................................GGGGACCGGGGCGGGGAC................................................................................................1811.001.00-1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGC...............................2011.001.00----------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGC...............................1911.001.00--------------------------------------------------1.00-------------------------------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGGCAATGCA.....................2911.001.00-----1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TCTGGAGCTGGCTGGCAATGCAGC...................2411.001.00---------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................................ACAGCGGAGATTCTGGAGC...................................1911.001.00---------------------------------------------------------------------------------------1.00------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGCTGGCTGGCAATGC......................2811.001.00-------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................................GGAGATTCTGGAGCTGGCTG.............................2011.001.00-----1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCC........................................................1911.001.00----1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ATACACTCATCTCTGCTCCCCACAGT.................................................261.000.00-----------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................TGGAGCTGGCTGGCAAGG.......................181.000.00--------------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................................................................................TTCTGGAGCTGGCTGGCAATG.......................2111.001.00----------------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCTGGCAATGCAGC...................3311.001.00----------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................CGAGAGACAACAAGAAGT..181.000.00---------------------------------------1.00------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTG.............................2211.001.00----------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................CATACACTCATCTCTGCTCCCCAC....................................................2411.001.00-------------------------------------------------------1.00--------------------------------------------------
.....................................................................................................................................TGTGGGGACCGGGGCGGGGACAT..............................................................................................231.000.00-------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGGAGATTCTGGAGCTGGCTGGCAATGCAG....................3111.001.00-----1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CTGGAGCTGGCTGGCAATG.......................1930.670.67---------------------------------------------------------------------------------------------------0.33----0.33-
........................................................................................................................................................................................................CGGAGATTCTGGAGCT..................................1620.500.50----------------------------------------------------------------------------------------------------0.50-----
.......................................................................................................................................................................................................GCGGAGATTCTGGAGC...................................1620.500.50----------0.50-----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAGC...................................1520.500.50------------------------------------------------------------------------------------------------------0.50---
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTG.................................1920.500.50-------------------------------------------------------------------------------------------------------0.50--
.........................................................................................................................................GGGACCGGGGCGGGGAC................................................................................................1720.500.50----------------0.50-----------------------------------------------------------------------------------------
........................................................................................................................................GGGGACCGGGGCGGGGA.................................................................................................1720.500.50-0.50--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCGGAGATTCTGGAGC...................................1720.500.50-----------------------------------------------------------------------------------------------------0.50----
................................................................................................................................................................................................................CTGGAGCTGGCTGGCAAT........................1830.330.33-----------------0.33----------------------------------------------------------------------------------------
.CATTGGACCTGGGGCT.........................................................................................................................................................................................................................................1630.330.33--------------------------------------------0.33-------------------------------------------------------------
....................................................................................................................................................................................................................................AGCGAGAGACAACAA.......1540.250.25----------------0.25-----------------------------------------------------------------------------------------
...........................................TCAGCACCTCTGTGAC...............................................................................................................................................................................................1660.170.17---------------------------------------------0.17------------------------------------------------------------
........................................................................................................................................................................................................CGGAGATTCTGGAG....................................1460.170.17---------------------------------------------------------------------------------------------------------0.17

Antisense strand
GCATTGGACCTGGGGCTTCCTAGGTCCCACTCAGCTTTGCCATTCAGCACCTCTGTGACTCTGCCCACAGCTTTTCACCTCAGGGTAGCTGCTTCCTGAAGCAGCTGCCTCTGCCCATTCCTGGCACTGTGAATGTGGGGACCGGGGCGGGGACACATGGTCCTCTAACATGACCATACACTCATCTCTGCTCCCCACAGCGGAGATTCTGGAGCTGGCTGGCAATGCAGCGAGAGACAACAAGAAGGGA
.....................................................................................................................................((((((((.(((((..(((....((((((.........))))))...)))..))))).))))))))...................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189786DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189787SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029128(GSM416757)
H520. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR189782SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................................................................AGCGGAGATTCTGGAGCTGGCTGGCAA......................... 2711.001.00-----------------------------------------------------------------------------------1.00----------------------
...................................................................................................................................AATGTGGGGACCGGGGCGGGGACA............................................................................................... 2411.001.00----------------1.00-----------------------------------------------------------------------------------------
............................................................CTGCCCACAGCTTTTTCGG........................................................................................................................................................................... 191.000.00------------------------------------1.00---------------------------------------------------------------------
............................................................................................TTCCTGAAGCAGCTGCCTCTC......................................................................................................................................... 211.000.00------------------------------------------------------------------------------1.00---------------------------
......................................................................................................................TCCTGGCACTGTGAATATT................................................................................................................. 191.000.00------------------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................................................................AGATTCTGGAGCTGGGTGT............................ 191.000.00-------------------------------------------------------------------1.00--------------------------------------
.............................................................................CCTCAGGGTAGCTGC.............................................................................................................................................................. 15100.100.10----------------------------------------------0.10-----------------------------------------------------------