ID: uc003dap.6
GENE: CACNA2D2(6)
chr3:50403545-50403747-


(3)
B-CELL 		(11)
BRAIN 		(4)
BREAST 		(3)
CELL-LINE 		(3)
CERVIX 		(7)
HEART 		(1)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
TESTES

Sense strand
ATGATGGAGGATTCCTGGTGCTGTCAAACCAGAACCATCAGTGGGACCAGGTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGTAGGGATTTGAGCCTTCTAGGGGTGTAGCACTGCCAGCCCTGTGACCATGGCTTTCTCCTGACATCCTCAGGTGGGCAGGTTCTTCAGTGAGGTGGATGCCAACCTGATGCTGGCACTCTA
....................................................((((.(((((..........................))))).))))..((((.((((....)).)).))))................................................................................
..................................................51......................................................................123..............................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
..................................................GTGAGGATCAGGAAGAGAGTGA...................................................................................................................................22172.0072.0021.006.004.007.003.002.003.003.003.003.00-2.001.001.001.001.001.00--1.00-----1.00--1.00-1.001.001.001.00--1.001.001.00------
..................................................GTGAGGATCAGGAAGAGAGT.....................................................................................................................................20136.0036.008.005.005.00-2.002.002.003.002.001.00-1.001.001.00--1.00-1.00----------1.00---------------
..................................................GTGAGGATCAGGAAGAGAGTG....................................................................................................................................21119.0019.003.003.002.003.00----1.001.004.00---1.00--------------------1.00---------
..................................................GTGAGGATCAGGAAGAGAG......................................................................................................................................19110.0010.004.004.00---1.00--------------------1.00------------------
..................................................GTGAGGATCAGGAAGAGAGTGAA..................................................................................................................................2319.009.001.001.002.002.00-1.00------1.00---------------------1.00----------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGA...............................................................................................................................2616.006.003.001.00---------------2.00---------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGA............................................................................................................................2916.006.004.002.00-------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAG.............................................................................................................................2816.006.002.003.00-------------------------1.00-----------------
..................................................GTGAGGATCAGGAAGAGA.......................................................................................................................................1845.255.253.000.750.25-------0.250.250.25-----0.25------------------------0.25-
..................................................GTGAGGATCAGGAAGAGAGA.....................................................................................................................................2015.0010.003.00----1.001.00--------------------------------------
..................................................GTGAGGATCAGGAAGAGAGGGA...................................................................................................................................2215.0010.00--2.00-1.001.00---1.00-----------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGT...................................................................................................................................2214.0019.00--1.001.001.00----------1.00-----------------------------
..................................................GTGAGGATCAGGAAGAG........................................................................................................................................1741.751.750.750.50-0.25-------0.25---------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAG................................................................................................................................2511.001.00----1.00----------------------------------------
......GAGGATTCCTGGTGCTGTCAAATC.............................................................................................................................................................................241.000.00-----------------------------------------1.00---
..................................................GTGAGGATCAGGAAGAGAGTA....................................................................................................................................2111.0036.00--------1.00------------------------------------
..................................................GTGAGGATCAGGAAGAGAGTAAG..................................................................................................................................2311.0036.00-------1.00-------------------------------------
....................................................................................................AGGGGTGTAGCACTGCTGC....................................................................................191.000.00--------------------1.00------------------------
..................................................GTGAGGATCAGGAAGAGACTGA...................................................................................................................................2241.005.25--1.00------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGAGAA..................................................................................................................................2311.0010.00------1.00--------------------------------------
................................................................................................................CTGCCAGCCCTGTGACAC.........................................................................181.000.00----------------------------------------1.00----
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAGA..........................................................................................................................3111.001.001.00--------------------------------------------
.......................................................................................................................................................................................AACCTGATGCTGGCACT...1711.001.00-------------1.00-------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGT........................................................................................................................3311.001.00-1.00-------------------------------------------
..................................................GTGAGGATCAGGAAGTGA.......................................................................................................................................181.000.00------1.00--------------------------------------
....................................................................................................AGGGGTGTAGCACTGCATC....................................................................................191.000.00--------------1.00------------------------------
...................................................TGAGGATCAGGAAGAGAGTGAAAGAAGAG...........................................................................................................................2911.001.001.00--------------------------------------------
....................................................................................................................................GCTTTCTCCTGACATCCTCA...................................................2011.001.00---------1.00-----------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGT...............................................................................................................................2611.001.001.00--------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGAA....................................................................................................................................2111.0010.00--1.00------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGCGA...................................................................................................................................2211.0010.00--1.00------------------------------------------
...................................................TGAGGATCAGGAAGAGAGTGA...................................................................................................................................2111.001.00----1.00----------------------------------------
..................................................GTGAGGATCAGGAAGAGAGG.....................................................................................................................................2011.0010.00-------1.00-------------------------------------
.................................................................................................TCTAGGGGTGTAGCACTCTG......................................................................................201.000.00---------------------1.00-----------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAG...........................................................................................................................3011.001.00-1.00-------------------------------------------
..................................................GTGAGGATCAGGAAGA.........................................................................................................................................1660.670.670.170.50-------------------------------------------
.....................................................AGGATCAGGAAGAGAGT.....................................................................................................................................1720.500.500.50--------------------------------------------
..................................................GTGAGGATCAGGAAGACA.......................................................................................................................................1860.170.67-0.17-------------------------------------------
..................................................GTGAGGATCAGGAAGATAG......................................................................................................................................1960.170.670.17--------------------------------------------
..................................................GTGAGGATCAGGAAGAAAA......................................................................................................................................1960.170.67--------------------------------------------0.17

Antisense strand
ATGATGGAGGATTCCTGGTGCTGTCAAACCAGAACCATCAGTGGGACCAGGTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGTAGGGATTTGAGCCTTCTAGGGGTGTAGCACTGCCAGCCCTGTGACCATGGCTTTCTCCTGACATCCTCAGGTGGGCAGGTTCTTCAGTGAGGTGGATGCCAACCTGATGCTGGCACTCTA
....................................................((((.(((((..........................))))).))))..((((.((((....)).)).))))................................................................................
..................................................51......................................................................123..............................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................GCACTGCCAGCCCTGATGG........................................................................... 191.000.00---------------------------------------1.00-----
.....................................................................................................................................................................................CCAACCTGATGCTGGCTCCG.. 201.000.00--1.00------------------------------------------
.....................................................................TGAAAGAAGAGAGTAATG.................................................................................................................... 181.000.00------------------------------------------1.00--
..............................................................................................................CACTGCCAGCCCTGTGAC........................................................................... 1811.001.00----------------------1.00----------------------
.............................................................................................................GCACTGCCAGCCCTGCATG........................................................................... 191.000.00-----------------------1.00---------------------
..................................................................................................................................................TCCTCAGGTGGGCAGGTTCTTC................................... 2211.001.00------------------------1.00--------------------