ID: uc003crt.16
GENE: DHX30(16)
chr3:47889991-47890163+


(1)
AGO1.ip 		(2)
AGO2.ip 		(20)
B-CELL 		(3)
BRAIN 		(11)
BREAST 		(50)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(5)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(31)
SKIN 		(3)
UTERUS 		(2)
XRN.ip

Sense strand
TCCAAACATCAAGGCAGTGGACGAGGCTGTGATCTTGCTCCAGGAGATCGGTATGTAGGGGCTGGGCTGGGCTGGGCTGGGGAGTGGCTCTCGAGGGTGGTACTGACAGCTGAGCCGTTGCAGGGGTGCTGGACCAGCGGGAGTACCTGACTACCCTGGGGCAGCGCCTGGCT
.................................................................((..((((.(((((...((((((((....))))..))))..))))).))))...))....................................................
............................................................61............................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR038856(GSM458539)
D11. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR029126(GSM416755)
143B. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................GGTACTGACAGCTGAGCCGTTGCAG..................................................251193.00193.009.0020.0010.0013.007.0013.005.00-14.008.0011.004.00---3.003.002.001.00--3.003.003.004.00--3.001.002.00-2.001.00--2.002.00-3.003.00---1.002.002.001.00--1.00--1.001.002.002.00-2.00-2.00----1.001.00--1.00--1.00-1.00----1.00-1.00----------1.00---1.00-----1.00-----1.001.00-1.001.00---1.001.001.00-----1.001.001.001.00------------
.................................................................................................TGGTACTGACAGCTGAGCCGTTGCAG..................................................261126.00126.008.00-6.003.006.002.0011.00--3.00-4.0010.00-4.004.004.003.004.002.003.002.001.001.00-3.00--1.001.001.001.00-2.003.001.001.00---2.001.001.002.00-----1.001.00-1.001.00----1.00-1.00---1.001.00-2.00----1.00----1.00-1.00--1.00-------1.00--1.00--------1.00---1.00--1.00--1.001.001.00------------1.001.001.00---------
....AACATCAAGGCAGTGGA........................................................................................................................................................17214.5014.500.50------12.00------------------1.00----------------------------------------------------------------------------------------------------------0.50-0.50---
.................................................................................................TGGTACTGACAGCTGAGCCGTTGCA...................................................25111.0011.005.00--1.001.00------1.00------------------------------------------------1.00-----1.00---1.00--------------------------------------------------------------------
...AAACATCAAGGCAGTGGA........................................................................................................................................................18210.0010.002.502.00-----3.00------------------2.00--------------------------------------------------------------------------------------------------------0.50-------
.......................................................................CTGGGCTGGGGAGTGGGCG...................................................................................195.000.00-------------5.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................GCTGGGCTGGGCTGGGGAGTGGCTA...................................................................................254.000.00---------------------------------------------------2.00---------2.00-----------------------------------------------------------------------------
..................................................................CTGGGCTGGGCTGGGGAGTGGCA....................................................................................234.000.00------------------------------------------------1.00-----------------1.00----------------1.00----------------------------------1.00--------------------
....................................................................GGGCTGGGCTGGGGAGTGGCTT...................................................................................224.000.00-------------4.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................CTGGGCTGGGCTGGGGAGTGG......................................................................................2123.503.50----0.50------------------0.50-----------------------------------------------0.500.50---------------------------------------------------------1.00---0.50----
.................................CTTGCTCCAGGAGATCGGTATGTAGGGG................................................................................................................2813.003.00--------------3.00----------------------------------------------------------------------------------------------------------------------------
.......................AGGCTGTGATCTTGCTCCAGGAGATCG...........................................................................................................................2713.003.001.00------------------2.00-----------------------------------------------------------------------------------------------------------------------
................................TCTTGCTCCAGGAGATCG...........................................................................................................................1813.003.00--------------------------------------------------------------2.00-------------------------------1.00--------------------------------------------
.................................................................................................TGGTACTGACAGCTGAGCCGTTGCAGA.................................................2713.00126.003.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CAGGGGTGCTGGACCAGCGGGAGTACC..........................2713.003.003.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................GTGGTACTGACAGCTGAGCCGTTGCAG..................................................2712.002.00----------------------------------------------------------------------1.00----------------------------1.00---------------------------------------
...................................................................................................GTACTGACAGCTGAGCCGTTGCAG..................................................2412.002.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................TGGGCTGGGCTGGGGAGTGGC.....................................................................................2112.002.00-------------------------------------2.00-----------------------------------------------------------------------------------------------------
......................GAGGCTGTGATCTTGCTCCAGGAG...............................................................................................................................2412.002.00-----------------------------------------1.00----------------------------------------------------------1.00--------------------------------------
.................................................................................................TGGTACTGACAGCTGAGCCGTTG.....................................................2312.002.00----1.00----------------------------------------------------------------------------1.00---------------------------------------------------------
......................GAGGCTGTGATCTTGCTCCAGGAGATCG...........................................................................................................................2812.002.00-----------1.00--------------------------------------------------------------------------------------------------------------1.00----------------
..................................................................................................GGTACTGACAGCTGAGCCGTTGCAGA.................................................2612.00193.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------
...............AGTGGACGAGGCTGTGATC...........................................................................................................................................1912.002.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------
....................ACGAGGCTGTGATCTTGCTCCAGGAGATCG...........................................................................................................................3012.002.00---------------------------------------------------------------------2.00---------------------------------------------------------------------
.................................................................................................TGGTACTGACAGCTGAGCCGTTGCCG..................................................262.000.00----1.00--------------------------------------------------------------------------------------------------1.00-----------------------------------
.........CAAGGCAGTGGACGAGGC..................................................................................................................................................1812.002.002.00------------------------------------------------------------------------------------------------------------------------------------------
...................GACGAGGCTGTGATCT..........................................................................................................................................1612.002.00----------------------------1.00-1.00------------------------------------------------------------------------------------------------------------
...................GACGAGGCTGTGATCTT.........................................................................................................................................1711.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------
............................................................................................................................GGTGCTGGACCAGCGGGAGTACGT.........................241.000.00---------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................CTGACTACCCTGGGGCAGCGCCTGGCTT281.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------
...............AGTGGACGAGGCTGTCTT............................................................................................................................................181.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------
...............AGTGGACGAGGCTGTGAT............................................................................................................................................1811.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------
...................GACGAGGCTGTGATCTTGCT......................................................................................................................................2011.001.00------------------------------1.00------------------------------------------------------------------------------------------------------------
....AACATCAAGGCAGTGGACGAGGCTGT...............................................................................................................................................2611.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
...................GACGAGGCTGTGATCTTGCTCCAGGAGAT.............................................................................................................................2911.001.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------
..................................................................................................GGTACTGACAGCTGAGCCGTTGCCG..................................................2511.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
......CATCAAGGCAGTGGACGAG....................................................................................................................................................1911.001.00----------------------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................CAGCTGAGCCGTTGCAG..................................................1711.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------------
........................................................AGGGGCTGGGCTGGGC.....................................................................................................1601.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GGGTGCTGGACCAGCGGGAGTACC..........................2411.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
..............................................ATCGGTATGTAGGGGCT..............................................................................................................1711.001.00---------------------------------------------------------------------------------------1.00---------------------------------------------------
...................................................................................................................CGTTGCAGGGGTGCTGGACCAG....................................2211.001.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------
..................................................................................................GGTACTGACAGCTGAGCCGTTGC....................................................2311.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
.....ACATCAAGGCAGTGGACG......................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00--------------------------------------------------
............................................................................................................................GGTGCTGGACCAGCGGGAGTACCT.........................2411.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------
..........AAGGCAGTGGACGAGGCTGTAAT............................................................................................................................................231.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................GGTACTGACAGCTGAGCCGT.......................................................2011.001.001.00------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CTGGGCTGGGCTGGGGAGTGGCT....................................................................................2311.001.00------------------------------------------------1.00------------------------------------------------------------------------------------------
........................................................AGGGGCTGGGCTGGGCTGGGCTT..............................................................................................231.000.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........AGGCAGTGGACGAGGCTT................................................................................................................................................181.000.00--------------------------------------------------------------------------------------1.00----------------------------------------------------
.......................AGGCTGTGATCTTGCTCCAGGAGAT.............................................................................................................................2511.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................GCTGGGCTGGGCTGGGCTGGGGAGA........................................................................................251.000.00--------------------------------------------------------------------------------------------------1.00----------------------------------------
..................................................................................................GGTACTGACAGCTGAGCCGTTGCAT..................................................2511.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTATGTAGGGGCTGGGCTGG.......................................................................................................2011.001.00------------------------------------------------------------------------------------------------------------------------1.00------------------
......................GAGGCTGTGATCTTGCTCCAGGAGATCGG..........................................................................................................................2911.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................TACTGACAGCTGAGCCGTTGCAG..................................................2311.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................AGGGGCTGGGCTGGGCTGCG.................................................................................................201.000.001.00------------------------------------------------------------------------------------------------------------------------------------------
.......................AGGCTGTGATCTTGCTCCAGGAGATCGG..........................................................................................................................2811.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------------
.............................................................CTGGGCTGGGCTGGGCTGGGGAGA........................................................................................241.000.00----------------------------------------1.00--------------------------------------------------------------------------------------------------
..................................................................CTGGGCTGGGCTGGGGAGTGGCAAG..................................................................................251.000.00--------------------------------------------------------------------------------------------------------1.00----------------------------------
.......................................................................................................................GCAGGGGTGCTGGACCAGCGGGT...............................231.000.00------------------------------------------------------------------------------------------------1.00------------------------------------------
..................GGACGAGGCTGTGATCTTGCTCCAGGAGATCGGGGT.......................................................................................................................361.000.00---------------------------------------------------------------------------1.00---------------------------------------------------------------
..................................................................................................................................GGACCAGCGGGAGTAC...........................1611.001.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
............................................................................................................................GGTGCTGGACCAGCGGGAG..............................1911.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................TGGTACTGACAGCTGAGCCGTTGCAA..................................................2611.0011.00---------------------------------1.00---------------------------------------------------------------------------------------------------------
........TCAAGGCAGTGGACGAG....................................................................................................................................................1711.001.001.00------------------------------------------------------------------------------------------------------------------------------------------
...........AGGCAGTGGACGAGGCTGTGGTTT..........................................................................................................................................241.000.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------
..........AAGGCAGTGGACGAGGCT.................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------1.00-----------------------------------------
..................................................................................................GGTACTGACAGCTGAGCCGTTGCA...................................................2411.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................GGGGCTGGGCTGGGCTGGGCTA..............................................................................................221.000.00----------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................CGAGGCTGTGATCTTGCTCCAGGAGA..............................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------1.00-----------------
..................................................................................................GGTACTGACAGCTGAGCCGTTG.....................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00---------------------------------
............................................................................................................................................................TGGGGCAGCGCCTGGCTTGG201.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------
.............GCAGTGGACGAGGCTGTGAT............................................................................................................................................2011.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------
............................GTGATCTTGCTCCAGGAGATCGG..........................................................................................................................2311.001.00-----------------------------------------------------------------------------------------1.00-------------------------------------------------
.......................................................................CTGGGCTGGGGAGTGGCT....................................................................................1830.670.67--------------------------------------------0.33-------------------------------------------------------------------------------------------0.33--
.............................................................CTGGGCTGGGCTGGGCTGGGGA..........................................................................................2250.600.60--0.20----------------0.20------------------------0.20----------------------------------------------------------------------------------------------
.............................................................................................................................GTGCTGGACCAGCG..................................1420.500.50------------------------------------------------------------------------------------------------------------------------------------0.50------
..............CAGTGGACGAGGCTGT...............................................................................................................................................1620.500.50-------------------------------------------------------------------------0.50-----------------------------------------------------------------
...................................................................TGGGCTGGGCTGGGGAGTGG......................................................................................2030.330.33------------------0.33------------------------------------------------------------------------------------------------------------------------
........................................................AGGGGCTGGGCTGGGCTGGGC................................................................................................2140.250.25-----------------------------------------------------------------------------------------------------------------------------------------0.25-
...............................................TCGGTATGTAGGG.................................................................................................................1360.170.17------------------------------------------------------------------------------------------------------------------------------------------0.17
.........................................................................................................................................................CCCTGGGGCAGCGCC.....1580.120.12--------------------------------------------------------------------------0.12----------------------------------------------------------------

Antisense strand
TCCAAACATCAAGGCAGTGGACGAGGCTGTGATCTTGCTCCAGGAGATCGGTATGTAGGGGCTGGGCTGGGCTGGGCTGGGGAGTGGCTCTCGAGGGTGGTACTGACAGCTGAGCCGTTGCAGGGGTGCTGGACCAGCGGGAGTACCTGACTACCCTGGGGCAGCGCCTGGCT
.................................................................((..((((.(((((...((((((((....))))..))))..))))).))))...))....................................................
............................................................61............................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR038856(GSM458539)
D11. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR029126(GSM416755)
143B. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................ACCCTGGGGCAGCGCCTGGG. 201.000.00--------------------------------------------------------------------------------------------1.00----------------------------------------------
......................................................................................................................TGCAGGGGTGCTGGACCAGCGGGAGTAC........................... 2811.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................GGGGTGCTGGACCAGCGGGAGTACCTGACT..................... 3011.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------
..............................................................................................GGGTGGTACTGACAGC............................................................... 1640.250.25---------------------------------------------0.25---------------------------------------------------------------------------------------------