ID: uc003clf.10
GENE: VIPR1(10)
chr3:42576547-42576884+


(1)
AGO2.ip 		(2)
B-CELL 		(6)
BRAIN 		(6)
BREAST 		(6)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(10)
LIVER 		(2)
OTHER 		(8)
SKIN

Sense strand
TTAAGCCTGAAGTGAAGATGGTCTTTGAGCTCGTCGTGGGGTCTTTCCAGGTATGGGCTGTTGACTTAAGGCTGCATTCTTCCCTGGCTTTTAAGGGAATTCAACCTGGAGTCTTGGCCCTTGCCACTGGATTCCAACCTTTTTACTGTAATAAGTATTAGATAAGCACCTACTTTGTGCTTAGCTCTTTCCTTAACCAGGGGAACACAGGGGCTGGAGCCAGGGGTGGGGCAGGGCTGGGGGCTTCTGGTCTGTCTACCTCACCTCTCCTGTCATCTTCCTTCTCAGGGTTTTGTGGTGGCTATCCTCTACTGCTTCCTCAATGGTGAGGTAAGCCC
..............................................................(((((.(((.((.....((((((........))))))..)).))).))))).................................................................................................................................................................................................................................
..................................................51.............................................................114..............................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR189786SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR343335SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR189784SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................TGTTGACTTAAGGCTGCATTCTT.................................................................................................................................................................................................................................................................23115.0015.001.001.00-1.00-2.002.001.00--1.00-2.00--1.00--------1.00---1.00-------------1.00----
..........................................................TGTTGACTTAAGGCTGCATTCTTCCC..............................................................................................................................................................................................................................................................2618.008.005.00---1.00----1.00----------1.00--------------------------
..........................................................TGTTGACTTAAGGCTGCATTCTTC................................................................................................................................................................................................................................................................2416.006.001.00-1.00----1.00-------1.001.00----------------------1.00-------
..........................................................TGTTGACTTAAGGCTGCATTC...................................................................................................................................................................................................................................................................2115.005.001.00--1.00--------------------------1.00-1.001.00-------------
..........................................................TGTTGACTTAAGGCTGCATT....................................................................................................................................................................................................................................................................2013.003.00--1.00-1.00-----------------------------------1.00------
..........................................................TGTTGACTTAAGGCTGCATTCT..................................................................................................................................................................................................................................................................2213.003.00----1.00-1.00--1.00-------------------------------------
..............................................................................................................................................................................................................................................................................................AGGGTTTTGTGGTGGCTA..................................1812.002.00-------1.001.00--------------------------------------
..............................................................................................................................................................................................................................................................................................AGGGTTTTGTGGTGGCTATA................................2012.001.00--2.00--------------------------------------------
..........................................................TGTTGACTTAAGGCTGCAT.....................................................................................................................................................................................................................................................................1912.002.00-------------------1.00------1.00--------------------
.................................................................................................AATTCAACCTGGAGTCTTGGC............................................................................................................................................................................................................................2112.002.00--2.00--------------------------------------------
.....CCTGAAGTGAAGATGGTCTTTGAGCT...................................................................................................................................................................................................................................................................................................................2612.002.00-----1.00--------1.00--------------------------------
........................................................................................................................................................................................................................................AGGGCTGGGGGCTTCTTCT.......................................................................................191.000.00-----------------------1.00-----------------------
..........................................................TGTTGACTTAAGGCTGCATTCTTCCCT.............................................................................................................................................................................................................................................................2711.001.00--------------1.00--------------------------------
........GAAGTGAAGATGGTCTTTGA......................................................................................................................................................................................................................................................................................................................2011.001.00--------1.00--------------------------------------
........GAAGTGAAGATGGTCTTT........................................................................................................................................................................................................................................................................................................................1811.001.00-1.00---------------------------------------------
........GAAGTGAAGATGGTCTTTGAGCT...................................................................................................................................................................................................................................................................................................................2311.001.00-1.00---------------------------------------------
......CTGAAGTGAAGATGGTCTTTG.......................................................................................................................................................................................................................................................................................................................2111.001.00--------1.00--------------------------------------
..........................................................TGTTGACTTAAGGCTGCATTCTTT................................................................................................................................................................................................................................................................2411.0015.00----1.00------------------------------------------
............................................TTCCAGGTATGGGCTGTTGA..................................................................................................................................................................................................................................................................................2011.001.00-------------1.00---------------------------------
.............GAAGATGGTCTTTGAGCTCGTCGTGGGG.........................................................................................................................................................................................................................................................................................................2811.001.00-----------------------------------1.00-----------
.............................................................................................................................................................................................................................................................................................CAGGGTTTTGTGGTGGCTATC................................2111.001.00----------------------------------1.00------------
...AGCCTGAAGTGAAGATGGTC...........................................................................................................................................................................................................................................................................................................................2011.001.00-1.00---------------------------------------------
..........................................................TGTTGACTTAAGGCTGCATTCTTCC...............................................................................................................................................................................................................................................................2511.001.00----------1.00------------------------------------
...................................................................................................................................................................................................................................................CTTCTGGTCTGTCTACTTT............................................................................191.000.00--------------------------------------1.00--------
..............AAGATGGTCTTTGAGCTCGTCGTG............................................................................................................................................................................................................................................................................................................2411.001.00-1.00---------------------------------------------
.........AAGTGAAGATGGTCTTTGAGCT...................................................................................................................................................................................................................................................................................................................2211.001.00-----------1.00-----------------------------------
....GCCTGAAGTGAAGATGGTCTTTGAG.....................................................................................................................................................................................................................................................................................................................2511.001.00-1.00---------------------------------------------
...........................................................GTTGACTTAAGGCTGCATTCTTCCC..............................................................................................................................................................................................................................................................2511.001.001.00----------------------------------------------
..............................................................................................................................................................................................................................................................................................AGGGTTTTGTGGTGGCTATTC...............................2111.001.00---1.00-------------------------------------------
....................................................................AGGCTGCATTCTTCCCAGT...........................................................................................................................................................................................................................................................191.000.00-------------------------------1.00---------------
............TGAAGATGGTCTTTGAGCTCGT................................................................................................................................................................................................................................................................................................................2211.001.00---1.00-------------------------------------------
..............................................................................................................................................................................................................................................................................................AGGGTTTTGTGGTGGCTATT................................2011.001.00---1.00-------------------------------------------
................................................................................................GAATTCAACCTGGAGTCTTGGC............................................................................................................................................................................................................................2211.001.00------------------1.00----------------------------
...................................GTGGGGTCTTTCCAGGTATGG..........................................................................................................................................................................................................................................................................................2111.001.00-1.00---------------------------------------------
......CTGAAGTGAAGATGGTCTTTGAG.....................................................................................................................................................................................................................................................................................................................2311.001.00-----------------1.00-----------------------------
.............................................................................................................................................................................................................................................................................................CAGGGTTTTGTGGTGGCTATTC...............................221.000.00-1.00---------------------------------------------
.............................................................................................................................................................................................................................................................................CTGTCATCTTCCTTCTCAGGGTTTTG...........................................2611.001.00-----------------------------------------1.00-----
..........................................................TGTTGACTTAAGGCTGCATTTTCC................................................................................................................................................................................................................................................................2411.003.00----------------------1.00------------------------
..............................................................................................................................................................................................................................................................................................AGGGTTTTGTGGTGGCTAT.................................1911.001.00-----------1.00-----------------------------------
................................................AGGTATGGGCTGTTGA..................................................................................................................................................................................................................................................................................1630.330.33-------------------------------------------0.33---

Antisense strand
TTAAGCCTGAAGTGAAGATGGTCTTTGAGCTCGTCGTGGGGTCTTTCCAGGTATGGGCTGTTGACTTAAGGCTGCATTCTTCCCTGGCTTTTAAGGGAATTCAACCTGGAGTCTTGGCCCTTGCCACTGGATTCCAACCTTTTTACTGTAATAAGTATTAGATAAGCACCTACTTTGTGCTTAGCTCTTTCCTTAACCAGGGGAACACAGGGGCTGGAGCCAGGGGTGGGGCAGGGCTGGGGGCTTCTGGTCTGTCTACCTCACCTCTCCTGTCATCTTCCTTCTCAGGGTTTTGTGGTGGCTATCCTCTACTGCTTCCTCAATGGTGAGGTAAGCCC
..............................................................(((((.(((.((.....((((((........))))))..)).))).))))).................................................................................................................................................................................................................................
..................................................51.............................................................114..............................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR189786SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR343335SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR189784SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................................................................................................................................................................................................................................GCTATCCTCTACTGCTTCCTCAATGG............ 2611.001.00-------------1.00---------------------------------
.................................TCGTGGGGTCTTTCCACCT.............................................................................................................................................................................................................................................................................................. 191.000.00-----------------------------1.00-----------------
........................................................................................TTTTAAGGGAATTCAAAG........................................................................................................................................................................................................................................ 181.000.00-------------------------------------1.00---------
.......................TTTGAGCTCGTCG.............................................................................................................................................................................................................................................................................................................. 1311.001.00---------------------1.00-------------------------
...............................................................................................................................................................................................................................................................CTACCTCACCTCTCCGGT................................................................. 181.000.00-------------------------1.00---------------------
....................................................................................................................................................................................................................GCTGGAGCCAGGGGTTGGC........................................................................................................... 191.000.00---------------------------1.00-------------------
....................................................................................................................................................................................TTAGCTCTTTCCTTAACC............................................................................................................................................ 1811.001.00------------------------------------1.00----------
..................................................................................................................................................................................................................................................................................................................CTCTACTGCTTCCTCAA............... 1740.250.25----------------0.25------------------------------
....................................................................................................................................................................................................................................................................................................................................GGTGAGGTAAGCCC 1460.170.17--------------------------------------------0.17--
........................TTGAGCTCGTCG.............................................................................................................................................................................................................................................................................................................. 1290.110.11---------------------------------------------0.11-
..........................................................................................................................................................................................................................GCCAGGGGTGGGGCAGG....................................................................................................... 17100.100.10----------------------------------------------0.10