ID: uc003byw.7
GENE: C3orf19(7)
chr3:14709356-14709605+


(2)
AGO2.ip 		(4)
B-CELL 		(1)
BRAIN 		(15)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(5)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(15)
SKIN 		(1)
XRN.ip

Sense strand
CTTATGAAACTTTGTAAGACATCAGAGGGTTCATAGGAGAGTACTTCATAGGGCTTCATTGTGAGGATCTCAAGGACAGCTTCTTAGAGGTGGCCTGAAGATCAATTAACTAGTCTATTTTTAGAAGAAAATTTCATCTTTTTGGACAGGAATATTGCAAATTTGGCTTCAAGCAAATAATTTTCTGATTTTCTGTTCAGACAACAGATCAGAGAACAAAACGAGAAAACATAAAGGAAAAGCGAAAGGC
..............................................................................................................................................((((((((((......(((((..((.....))....)))))......))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037941(GSM510479)
293DroshaTN. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189783SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343336SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................TTTTCTGATTTTCTGTTCAGT.................................................21110.002.00-3.00----1.00-1.001.001.00----------------------1.00----------1.001.00-
................................................................................................................................................GACAGGAATATTGCAAATTT......................................................................................2015.005.005.00----------------------------------------------
..............................................................................................................................................TGGACAGGAATATTGCAAATT.......................................................................................2115.005.00--2.00---------------------1.00-1.00----------1.00---------
.............................................................................................................................................TTGGACAGGAATATTGCAAATT.......................................................................................2215.005.00-----2.00-----------1.001.00------------1.00---------------
...................................................................................................................................................................................ATTTTCTGATTTTCTGTTCAGA.................................................2215.005.00---3.00---2.00---------------------------------------
............................................................................................................................................TTTGGACAGGAATATTGCAAATT.......................................................................................2314.004.00---------1.00--------------------1.00-----1.00----1.00-----
....................................................................................................................................................................................TTTTCTGATTTTCTGTTCAG..................................................2012.002.00------1.00-----------------------------------1.00----
........................................GTACTTCATAGGGCTAGC................................................................................................................................................................................................182.000.00------------1.00---------------1.00------------------
............................................................................................................................................TTTGGACAGGAATATTGC............................................................................................1812.002.002.00----------------------------------------------
..........................................................................................................................................................................................................AACAGATCAGAGAACAAAAC............................2012.002.00----2.00------------------------------------------
.............................................................................................................................................TTGGACAGGAATATTGCAAA.........................................................................................2011.001.00--------1.00--------------------------------------
.......................................................................................................................................................................................................GACAACAGATCAGAGAACAAA..............................2111.001.00--------------1.00--------------------------------
...................................................................TCTCAAGGACAGCTTCTTAGAG.................................................................................................................................................................2211.001.00---------------------1.00-------------------------
..TATGAAACTTTGTAAGACATCAGAGGGTTC..........................................................................................................................................................................................................................3011.001.00----------------------------------------------1.00
......................................................TTCATTGTGAGGATCTCAAGGACAGCTT........................................................................................................................................................................2811.001.00-------------------1.00---------------------------
........................................................CATTGTGAGGATCTCAAGGACAGC..........................................................................................................................................................................2411.001.00--------------------------------------1.00--------
............................................................................................................................................TTTGGACAGGAATATTGCAAATTT......................................................................................2411.001.00-------------------------------------------1.00---
...................................................................................................................................................................................ATTTTCTGATTTTCTGTTCAGT.................................................2211.001.00---------------------------------------1.00-------
.....GAAACTTTGTAAGACATC...................................................................................................................................................................................................................................1811.001.00----------------------1.00------------------------
.........................................................................................GTGGCCTGAAGATCAATT...............................................................................................................................................1811.001.00----------------------------------------1.00------
.........................................................................................................................................................................................................CAACAGATCAGAGAACA................................1711.001.00----------------1.00------------------------------
....................ATCAGAGGGTTCATAGGAGAG.................................................................................................................................................................................................................2111.001.00-----------------------------1.00-----------------
..............................................................................................................................................TGGACAGGAATATTGCAAATTT......................................................................................2211.001.00--1.00--------------------------------------------
...................................................................................................................................................................................ATTTTCTGATTTTCTGTTCAG..................................................2111.001.00---------------------------1.00-------------------
........................................................................................................................................................................................................ACAACAGATCAGAGAACAAAACGAG.........................2511.001.00----------------------------------1.00------------
..............................................................................................................................................TGGACAGGAATATTGCAAAT........................................................................................2011.001.00----1.00------------------------------------------
............................................................................................................................................TTTGGACAGGAATATTGCAAATTTGGC...................................................................................2711.001.00-----------------------1.00-----------------------
.........................................................................................................................................................................................................CAACAGATCAGAGAACAAAACGA..........................2311.001.00-------------------------1.00---------------------
........................................................................................GGTGGCCTGAAGATCAATTA..............................................................................................................................................2011.001.00-----------1.00-----------------------------------
........................................................................................................................................................................................................ACAACAGATCAGAGAACAAAACGAGAAAACAC..................321.000.00--------------------------------1.00--------------
......................................................................CAAGGACAGCTTCTTAGA..................................................................................................................................................................1811.001.00-----------------------------------1.00-----------
...........................................................................................................................................................................................................ACAGATCAGAGAACAAAACGAGA........................2311.001.00---------------1.00-------------------------------
...............................................................................................................................................................................................................ATCAGAGAACAAAACGAGAAAA.....................2211.001.00-------------1.00---------------------------------
.......................................................................................................................................................................................................GACAACAGATCAGAGAAC.................................1811.001.00--------------------1.00--------------------------

Antisense strand
CTTATGAAACTTTGTAAGACATCAGAGGGTTCATAGGAGAGTACTTCATAGGGCTTCATTGTGAGGATCTCAAGGACAGCTTCTTAGAGGTGGCCTGAAGATCAATTAACTAGTCTATTTTTAGAAGAAAATTTCATCTTTTTGGACAGGAATATTGCAAATTTGGCTTCAAGCAAATAATTTTCTGATTTTCTGTTCAGACAACAGATCAGAGAACAAAACGAGAAAACATAAAGGAAAAGCGAAAGGC
..............................................................................................................................................((((((((((......(((((..((.....))....)))))......))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037941(GSM510479)
293DroshaTN. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189783SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343336SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)