ID: uc003ayk.2
GENE: FAM83F(2)
chr22:40417094-40417343+


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
B-CELL 		(3)
BREAST 		(2)
CELL-LINE 		(4)
CERVIX 		(1)
HELA 		(2)
OTHER 		(21)
SKIN

Sense strand
TGCTTGCTTCATTTGAGGCCAAGCTCTGGGGAAAGGGAGGCTACGGGTGGGTGGAGGGAATCAGTCCAGCGTGTGGCCCACAAGGAGCCGTACACCTGCAGCAAGGGTCTGGCCACAGCGGAGGGGCAGGTGGGGGCGGGGGCAGGGCAAGAGAGAGGCCTGGGCACATGTGTCTTGCTTTTCTGTCCCCACGTTCCCAGGTTCACCTGGAGTTCCTCCCATGTGGACAGAAACCTCCTCCTGCTCCTGA
...............................................................................................................((....))...((((...((((((((((((((((((((........((....)).....)))))))))..)))))))))))..))))....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR189786SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCC.....................................................2317.007.001.002.00------1.001.00-1.00-------------------1.00-----
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTC......................................................2217.007.00--2.00---1.00--------1.00---1.00---1.00-----1.00-------
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTT.......................................................2115.005.00---2.00--1.00-1.00------------------------1.00---
................................................................................................................................................................................................................................GGACAGAAACCTCCTGTGG.......193.000.00--------------------1.001.00------------1.00--
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCA.....................................................2312.007.00----------1.00-------------1.00------------
..............................................................................................................................................................................................................................GTGGACAGAAACCTCC............1631.331.33-0.33--------0.330.33------------------------0.33
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCCCAG..................................................2611.001.001.00------------------------------------
................................................................................................................................................................................................................................GGACAGAAACCTCCTGTG........181.000.00--------------------------1.00----------
................................................................................................................................................................................................................................GGACAGAAACCTCCTCGC........181.000.00-------------------------1.00-----------
..............................................................................................................................................................................................................................GTGGACAGAAACCTCCTTGG........201.000.00---------------------------1.00---------
....................................................................................................................................................................................TTCTGTCCCCACGTTGG.....................................................171.000.00-------------1.00-----------------------
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCCCAT..................................................261.000.00------------1.00------------------------
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCCC....................................................2411.001.00----------------------1.00--------------
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTCCA....................................................2411.007.00--------------1.00----------------------
..............................................................................................................................................................................TTGCTTTTCTGTCCCCACGTTTCCT...................................................2511.005.00-----1.00-------------------------------
..................................................................................................................................TGGGGGCGGGGGCAGAAGA.....................................................................................................191.000.00-------1.00-----------------------------
................................................................................................................................................................................................................................GGACAGAAACCTCCTGT.........171.000.00----------------1.00--------------------
......................................................................................................................CGGAGGGGCAGGTGGCTCG.................................................................................................................191.000.00-----1.00-------------------------------
............................................................................................................................................GGCAGGGCAAGAGAGACC............................................................................................181.000.00-----------------1.00-------------------
.......................CTCTGGGGAAAGGGAGGC.................................................................................................................................................................................................................1830.670.670.67------------------------------------
...............................................................................................................................................................................TGCTTTTCTGTCCCCACG.........................................................1820.500.50-----------------------------------0.50-
...............................................................................................................................................................................................................................TGGACAGAAACCTCCTC..........1730.330.33---------0.33---------------------------

Antisense strand
TGCTTGCTTCATTTGAGGCCAAGCTCTGGGGAAAGGGAGGCTACGGGTGGGTGGAGGGAATCAGTCCAGCGTGTGGCCCACAAGGAGCCGTACACCTGCAGCAAGGGTCTGGCCACAGCGGAGGGGCAGGTGGGGGCGGGGGCAGGGCAAGAGAGAGGCCTGGGCACATGTGTCTTGCTTTTCTGTCCCCACGTTCCCAGGTTCACCTGGAGTTCCTCCCATGTGGACAGAAACCTCCTCCTGCTCCTGA
...............................................................................................................((....))...((((...((((((((((((((((((((........((....)).....)))))))))..)))))))))))..))))....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR189786SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
.................GCCAAGCTCTGGGGAAAGGG..................................................................................................................................................................................................................... 201.000.00----1.00--------------------------------
....................................................................................................................................GGGGCGGGGGCAGGGCAAGAGT................................................................................................ 221.000.00------------------1.00------------------
.......................................................................................CCGTACACCTGCAGCAAGC................................................................................................................................................ 191.000.00------------------------------1.00------
........................................................................................................................................................................................................................................ACCTCCTCCTGCTCCTGGA 191.000.00----------------------------1.00--------
...........................................................................................................TCTGGCCACAGCGGAAGA............................................................................................................................. 181.000.00--------------------------------1.00----
......................................................................................................................................GGCGGGGGCAGGGCAAGA.................................................................................................. 1811.001.00-------1.00-----------------------------
......................................................................................................................................GGCGGGGGCAGGGCAGGG.................................................................................................. 181.000.00----1.00--------------------------------