ID: uc003aes.6
GENE: EWSR1(6)
chr22:29684395-29684644+


(2)
AGO2.ip 		(4)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(24)
CELL-LINE 		(4)
HEART 		(1)
HELA 		(5)
LIVER 		(4)
OTHER 		(11)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
AGGTTATTTCAGCTGTGATGATCCAGCAGTTTTGTTGAACTTAAAAGAGCCTACCTATTAAGGATGCTTTATCGTGATGTAAAGAAGATGGTGCCTTGGTTAGTGCCTTGGAATTGAGGATTTTGTGATTCCAGGAGAAAGTACATCAGGCAGTGGTGTAAATGCTGGTCCATGGCTTACAGATGTGACTCTTTCCTCAGGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAG
....................................................................................................................................((((((.((((((((((((.((((.((....))....)))).))))...)))))).)).)))))).....................................................
.............................................................................................................................126.......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189784SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189786SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................................................TTACAGATGTGACTCTTTCCTCA...................................................23120.0020.0019.001.00-------------------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTT........................................................22110.0010.00---5.00---1.001.00-1.00------------------1.00-1.00-------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCCTCA...................................................2218.008.004.003.00-------------------------------------------------1.00-----------
..................................................................................................................................................................................ACAGATGTGACTCTTTCCTCAG..................................................2218.008.004.003.00------------------------------1.00------------------------------
..................................................................................................................................CCAGGAGAAAGTACATCAGGCAGT................................................................................................2418.008.00----6.00-----------2.00----------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTTCCT.....................................................2517.007.00--2.00------1.00----------------1.00---1.00---1.00-----------------------1.00----
................................................................................................................................................................................TTACAGATGTGACTCTTTCCTC....................................................2217.007.005.001.00--------1.00----------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTTC.......................................................2316.006.00--4.00---------------1.001.00-------------------------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGACTCTTT........................................................2316.006.00---1.00----3.00--1.00---------------------1.00-----------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTTCCTC....................................................2614.004.00-----4.00---------------------------------------------------------
..................................................................................................................................................................................ACAGATGTGACTCTTTCCTCA...................................................2114.004.003.00--------1.00-----------------------------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCCTCAA..................................................2314.008.00-4.00-------------------------------------------------------------
....................................................................................................................................AGGAGAAAGTACATCAGGCA..................................................................................................2013.003.00-----------------------1.00------------------------------1.00----1.00---
................................................................................................................................................................................TTACAGATGTGACTCTTTCCT.....................................................2113.003.002.00----1.00---------------------------------------------------------
...............................................................................................................................................................................CTTACAGATGTGACTCTTTCCT.....................................................2213.003.00--3.00------------------------------------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCCTCAGT.................................................2413.003.001.00-1.00----------------------------------1.00-------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGACTCTTTC.......................................................2413.003.00--1.00-----------1.00---1.00--------------------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCCTCAG..................................................2313.003.003.00--------------------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTTCC......................................................2413.003.00-----------------2.00-----------------------1.00---------------------
................................................................................................................................................................................TTACAGATGTGACTCTTTCCTCAG..................................................2412.002.002.00--------------------------------------------------------------
................................................................................................................................................................................TTACAGATGTGACTCTTTCCTCT...................................................2312.007.00--------------------1.00---------------------------------------1.00--
..................................................................................................................................................................................ACAGATGTGACTCTTTCCT.....................................................1912.002.002.00--------------------------------------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCCTC....................................................2112.002.002.00--------------------------------------------------------------
.........................GCAGTTTTGTTGAACTCTG..............................................................................................................................................................................................................192.000.00--------------------------------------1.00---------1.00--------------
..........................................................................................................................................................................CATGGCTTACAGATGTGACTCTT.........................................................2312.002.00--------------1.00--------------------------------1.00---------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTT.........................................................2112.002.00-------1.00---------------------------1.00---------------------------
...............................................................................................................................................................................................................CCGACAGGACCACCCCAGTAGCATGGGTG..............2912.002.00------2.00--------------------------------------------------------
.................................................................................................................................................................................TACAGATGTGACTCTTTCTTCA...................................................221.000.001.00--------------------------------------------------------------
................................................................................................................................................................................TTACAGATGTGACTCTTT........................................................1811.001.00------------1.00--------------------------------------------------
...................................................................................................................................................................................CAGATGTGACTCTTTCCTCAGA.................................................221.000.00------------1.00--------------------------------------------------
........................................................................................................................................................GTGGTGTAAATGCTGGTCCATGGCTTAC......................................................................2811.001.00------------------------------------------1.00--------------------
....................................................................................................................................AGGAGAAAGTACATCAGGCAG.................................................................................................2111.001.00--------------------------------------------------------1.00------
................................................................................................................................................................................TTACAGATGTGACTCTTTCCTCAT..................................................2411.0020.00--------------------1.00------------------------------------------
..............................................................................................................................................................................GCTTACAGATGTGACTCTTTC.......................................................2111.001.00----------------------1.00----------------------------------------
.....................................................................................AGATGGTGCCTTGGTTAGTGCCTCGG...........................................................................................................................................261.000.00----------------------------------------1.00----------------------
................................................................................................................................................................................TTACAGATGTGACTCTTCCTC.....................................................211.000.001.00--------------------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTC...........................................................1911.001.00---------------------------------------------1.00-----------------
..................................................................CTTTATCGTGATGTAAAGAAGATGGTG.............................................................................................................................................................2711.001.00-------------------------1.00-------------------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGACTCTT.........................................................2211.001.00-------------------1.00-------------------------------------------
................................................................................................................................................................................TTACAGATGTGACTCTTTCTTCA...................................................231.000.001.00--------------------------------------------------------------
..GTTATTTCAGCTGTGATGA.....................................................................................................................................................................................................................................1911.001.00---------------------------1.00-----------------------------------
............................GTTTTGTTGAACTTAAAAGAGCC.......................................................................................................................................................................................................2311.001.00-------------1.00-------------------------------------------------
.................................................................................................................................TCCAGGAGAAAGTACATCAGGC...................................................................................................2211.001.00-----------1.00---------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGACTCTTTCCCCAG..................................................2811.003.00------------------------1.00--------------------------------------
..........................................................................................................................................................GGTGTAAATGCTGGTCCATGGCT.........................................................................2311.001.00----------------------------1.00----------------------------------
....................................................................................................................AGGATTTTGTGATTCCAGGAGAAAGTATC.........................................................................................................291.000.00---------------------1.00-----------------------------------------
............................................................AGGATGCTTTATCG................................................................................................................................................................................1411.001.00-------------1.00-------------------------------------------------
.....................................................................TATCGTGATGTAAAGAAGATGGTGCCTTGG.......................................................................................................................................................3011.001.00----------------------------------------------------1.00----------
...................................................................................................................................CAGGAGAAAGTACATCAGGCAGTG...............................................................................................2411.001.00---1.00-----------------------------------------------------------
............................................................................................................................................................................TGGCTTACAGATGTGAC.............................................................1711.001.00----------1.00----------------------------------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGACTCTTTCCT.....................................................2611.001.00---------1.00-----------------------------------------------------
........................................................................................................................................................................................................GTTCATTCCGACAGGACCACCCCAG.........................2511.001.00------1.00--------------------------------------------------------
................................................................................................................................................................................................................CGACAGGACCACCCCAGTAGCATGG.................2511.001.00---------------1.00-----------------------------------------------
.......................................................................................................................................AGAAAGTACATCAGGCAGTGG..............................................................................................2111.001.00-------1.00-------------------------------------------------------
..................................................................CTTTATCGTGATGTAAA.......................................................................................................................................................................1711.001.00-------------------------------------------------------1.00-------
..............................................................................................................................................................................................................TCCGACAGGACCACCC............................1611.001.00--------------------------------------------1.00------------------
..........................................................................................................................................................................CATGGCTTACAGATGTGACTCT..........................................................2211.001.00---------------------------------------------------------1.00-----
...................................................................................................................................................................GCTGGTCCATGGCTTACAGATGTGACTCTTTCC......................................................3311.001.00-------------------------------------------1.00-------------------
........................................................................................................................................................................TCCATGGCTTACAGATGTGAC.............................................................2111.001.00---------------1.00-----------------------------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGAC.............................................................1811.001.00-----------------------------------------------------1.00---------
.................................................................................................................................................................................TACAGATGTGACTCTTTTCCA....................................................211.000.001.00--------------------------------------------------------------
............................................................................................................................................................................................................ATTCCGACAGGACCACCCCAGCAGC.....................251.000.00------1.00--------------------------------------------------------
...........................................................................................................................................................................ATGGCTTACAGATGTGACT............................................................1911.001.00-------1.00-------------------------------------------------------
....................................................................................................................................................................CTGGTCCATGGCTTACAGATGTGA..............................................................2411.001.00------------------------------------1.00--------------------------
....................................................................................................................................AGGAGAAAGTACATCAGGCAGTG...............................................................................................2311.001.00--------------------------------------------------1.00------------
.....................................................................................................................................................................................................................................ATGGGTGTTTATGGGCAGG..1920.500.50-------------------------------------------------------------0.50-
............................................................................................................................................................................................................................CCCAGTAGCATGGGTGTTTATGGGCAG...2720.500.50---------------------0.50-----------------------------------------
..................................................................................................................................................................................................................ACAGGACCACCCCAGTAGCATGGG................2420.500.50------0.50--------------------------------------------------------
..........................................................................................................................................................................................................................ACCCCAGTAGCATGG.................1530.330.33---------0.33-----------------------------------------------------
..................................................................................................................................................................................................................ACAGGACCACCCCAG.........................1550.200.20--------------------------------------------------------------0.20

Antisense strand
AGGTTATTTCAGCTGTGATGATCCAGCAGTTTTGTTGAACTTAAAAGAGCCTACCTATTAAGGATGCTTTATCGTGATGTAAAGAAGATGGTGCCTTGGTTAGTGCCTTGGAATTGAGGATTTTGTGATTCCAGGAGAAAGTACATCAGGCAGTGGTGTAAATGCTGGTCCATGGCTTACAGATGTGACTCTTTCCTCAGGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAG
....................................................................................................................................((((((.((((((((((((.((((.((....))....)))).))))...)))))).)).)))))).....................................................
.............................................................................................................................126.......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189784SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189786SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................................................................TCTTTCCTCAGGTTCATTCC......................................... 201.000.00-------------------------------------------------1.00-------------
.............................................................................................................................................................................................TCTTTCCTCAGGTTCATCA.......................................... 191.000.00---------------------------------------1.00-----------------------
....................................................................................................................................................................................................................AGGACCACCCCAGTATC..................... 171.000.00----------------------------------------------1.00----------------