ID: uc002nyr.2
GENE: USF2(2)
chr19:35761150-35761399+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(5)
BRAIN
(12)
BREAST
(32)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(5)
HELA
(4)
LIVER
(3)
OTHER
(1)
RRP40.ip
(39)
SKIN
(4)
UTERUS
(2)
XRN.ip

Sense strand
ACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCTACACGCAGAAGGAGTCCCCACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAGGGTAGCCTCTGCCCTCCTACTCCCCAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGC
.............................................................................................................................................(((((......(((((..(((((...((((....))))))))).)))))...)))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038855(GSM458538)
D10. (cell line)
SRR189787SRR038860(GSM458543)
MM426. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189783SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
............................................................................................................................................AGGGGACGGGATGGAGGAACAGA.......................................................................................23130.0030.004.00--1.005.005.00-1.00--1.00-1.00--1.00----1.00--2.00---------------2.00-----1.00-1.00--1.00----------------------------------------1.00---1.00----------------1.00---------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGT.................................................21128.0018.00-1.00-----2.002.003.00--1.001.00------1.001.001.00-3.00-----1.00-------------1.00-2.00--------------1.00----------1.00----------1.00-------------1.00--------1.001.00---------1.00----1.00-----
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGC.................................................................................24120.0020.002.00-6.00-1.001.00-2.00---2.001.00------------2.00------------1.00--------------------------------------------------1.00--1.00-----------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGA.................................................21118.0018.001.004.00-1.00---1.002.001.00--------2.00-1.001.00-----------1.00------------------------------1.00---------------------------------------------1.00---------1.00-------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAG..................................................20118.0018.00-3.006.002.00--------1.00-----1.00----------------2.00------2.00-----------------------------------------------------1.00-------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGA.....................................................................................20114.0014.003.00-----8.00---1.00------------------------------------------------------1.00------------------------------------------------1.00-------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAG..................................................................................23113.0013.007.00-------1.00----1.00-1.00-------------------------------------------------------1.00--------1.00------------1.00----------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAA...................................................................................22113.0013.001.00---------1.00--1.00--1.00-----1.001.00----------1.00------------1.00------------------1.00-1.00----1.00-----1.00----------1.00-------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAGA.....................................................................................25112.0012.00---4.00------1.00------1.00---------------1.00--------------1.002.00----------------------------------1.00-------------1.00-----------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAA....................................................................................2117.007.00----------------------------1.00-------1.00----------------------1.00-------------------------1.00--1.00------------1.00-------------1.00------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACA.........................................................................................2215.005.00----2.002.00----------------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAG......................................................................................2414.004.00--------------1.00--1.00----------------------1.00----------------------------------------------------------1.00----------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGAG......................................................................................2513.003.00--------------------------------------------------------------------------1.00-------------------------------------------1.00-----1.00---
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTT................................................2213.0018.00---------2.00---1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAG........................................................................................2213.003.00---------------------------1.00----------1.00-----------------------------------------------1.00-----------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGA.......................................................................................2413.003.00-----------2.00---------------------------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................TGGCAGTCCGGCGGCCGAGGCCG232.000.00--------------2.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAAC..........................................................................................2012.002.00-------------------1.00---------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGT.......................................................................................2312.003.00-----------------------------1.00-1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTGCCCTCCTACTCCCCAGA.................................................222.000.00--------------------------2.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGAAA...............................................2312.0018.00-----------------------------------------1.00----------------------------------------1.00---------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGT.................................................................................2412.0013.00-----------------------------------------------------1.00--1.00-----------------------------------------------------------------------
.................................................................................................................................................................GAGAAAGCTAAGGGTTTGT......................................................................192.000.00-------------------------------------------------------------------1.00-------------------------------------------1.00----------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAAT.....................................................................................2512.0030.00----------1.00-------------------------------------------------------------------------------------------------------------------1.00-
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTAT...............................................2312.0018.00-------------------1.00--------------------------------------------------------1.00---------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAA..................................................2012.001.00-2.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCTCAG..................................................202.000.00-2.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGAAG...............................................2312.0018.00-------------------------------------1.00-------------------------1.00----------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCCGA.................................................212.000.00---------------------------------------------------------1.00-----------------------------------------------------------------1.00----
....................................................................................................................................................................................TCTGCCCTCCTACTCCC.....................................................1721.501.50---------------------------------------------------1.50----------------------------------------------------------------------------
..................................................................................................................................................CGGGATGGAGGAACAGAGAAAGCTA...............................................................................2511.001.00----------------1.00---------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAA...........................................................................................1911.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGT.....................................................................................201.000.00----------------------------------------------------1.00---------------------------------------------------------------------------
............................................................CAGGACAGAATGCTACACGCA.........................................................................................................................................................................2111.001.00---------------------------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGC.................................................2111.0018.00------------------------------------------------1.00-------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAACAGAT......................................................................................2411.0030.00---------------------------------------------------------------------1.00----------------------------------------------------------
......................................TGTTCCAGGGCTGTTTGAAACACAGGACA.......................................................................................................................................................................................2911.001.00-------------------------------1.00------------------------------------------------------------------------------------------------
.............................................................AGGACAGAATGCTACACGC..........................................................................................................................................................................1911.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAAGAA................................................................................2511.0013.00----------------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGGATGGAGGAACAGAGCGC...................................................................................201.000.00----------------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCA...................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................AATGGTGGCAGTCCGGCGGCC.....2111.001.00---------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCTG..................................................201.000.00-1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AGGGGACGGGATGGAGGAAT..........................................................................................2011.001.00---------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GCCCTCCTACTCCCCCCTT................................................191.000.00----------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................AGGACAGAATGCTACACGCAGA.......................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................................................................................................AGCAATGGTGGCAGTTATA..........191.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................TCCCCACTCCTGTTATCT................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................ACGGGATGGAGGAACAGAGAAT...................................................................................2211.007.00-------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................GAGAAAGCTAAGGGTTTG.......................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................................................................................................ATGGTGGCAGTCCGGCGGCCGAGGCCG271.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------
...................................................TTTGAAACACAGGACAGAATGCTACACGC..........................................................................................................................................................................2911.001.00-------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTGCCCTCCTACTCCCCAGT.................................................201.000.00-------------------------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GATCCAAAATCCCTTCAG...........................1811.001.00----------------------------------------------------------------------------------------------------1.00---------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGT.......................................................................................2411.001.00------------------------------------------------------------------------------1.00-------------------------------------------------
..........................................................CACAGGACAGAATGCTACACGCAGAAGGAG..................................................................................................................................................................3011.001.00--------------------------------------------------------------------------------------------------------------------1.00-----------
..........................................................................................................................................................AGGAACAGAGAAAGCGG...............................................................................171.000.00------------------------------------1.00-------------------------------------------------------------------------------------------
......................................................................TGCTACACGCAGAAGG....................................................................................................................................................................1611.001.00----------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAT..................................................2011.001.00-------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGGATGGAGGAACAGAGAAAGCTAAGGG...........................................................................2811.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCATT.................................................2111.001.00-------------------------------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................GACGGGATGGAGGAACGGAG......................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------1.00--
.........................................................................................................................................ATGAGGGGACGGGATGGAG..............................................................................................1911.001.00---------------------------------------------------------------------------1.00----------------------------------------------------
......................................................................................................................................................ATGGAGGAACAGAGAAAGC.................................................................................1911.001.00-------------------------------------------------------1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................CAGTCCGGCGGCCGAGGCTT201.000.00---------------------------------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................TGAGGGGACGGGATGGAGGAACAGAGA.....................................................................................2711.001.00---------------------------------------------------------------------------------------------------------1.00----------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAG........................................................................................2311.001.00---------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................ACGGGATGGAGGAACAGA.......................................................................................1811.001.00-------------------------------------------------------------------------------------------------------------------------1.00------
........................................................................CTACACGCAGAAGGACG.................................................................................................................................................................171.000.00----------------------------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................ATGAGGGGACGGGATGGAGGAACAGAGAA....................................................................................2911.001.00------------------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGACGGGATGGAGGACACA........................................................................................201.000.00------------------------------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAGTAGA..............................................2411.0018.00------------------------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................AGCAATGAGGGGACGCCT...................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------
...........................................................ACAGGACAGAATGCTACACGCAGAA......................................................................................................................................................................2511.001.00----------------------------------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................................................................................................GTGGCAGTCCGGCGGCCGA...1911.001.00-------------------------------------------------------------------------------------------------------1.00------------------------
..................................................................................................................................................................................CCTCTGCCCTCCTACTCCCCAGT.................................................231.000.00---1.00----------------------------------------------------------------------------------------------------------------------------
.....................................ATGTTCCAGGGCTGTTTGAAAC...............................................................................................................................................................................................2211.001.00----------------------1.00---------------------------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGGACGGGATGGAGGAACAGG.......................................................................................2411.001.00--------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCATA.................................................2111.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TGGTGGCAGTCCGGCGGCCGAGGCCG261.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTGCCCTCCTACTCCCCAC..................................................2011.001.00------------------------------------------------------------1.00-------------------------------------------------------------------
......................................TGTTCCAGGGCTGTT.....................................................................................................................................................................................................1570.140.14--------0.14-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGGATGGAGGAAC..........................................................................................1490.110.11-------------------------0.11------------------------------------------------------------------------------------------------------

Antisense strand
ACGGATTTGCTCAGCAAGTGATCGCTGACCTCCCGCCATGTTCCAGGGCTGTTTGAAACACAGGACAGAATGCTACACGCAGAAGGAGTCCCCACTCCTGTTAATTGCAGAGAATGCAGTAAACCCCAAGCACAGCAATGAGGGGACGGGATGGAGGAACAGAGAAAGCTAAGGGTAGCCTCTGCCCTCCTACTCCCCAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGC
.............................................................................................................................................(((((......(((((..(((((...((((....))))))))).)))))...)))))....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038855(GSM458538)
D10. (cell line)
SRR189787SRR038860(GSM458543)
MM426. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189783SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
..............................................................................................................................................................................................TACTCCCCAGGCTGTCGG.......................................... 181.000.00--------------------------------------------------------------1.00-----------------------------------------------------------------
............................................................................................................................................................................................CCTACTCCCCAGGCTTC............................................. 171.000.00--------------------------------------------------------------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................GCCCTCCTACTCCCCAG.................................................. 1720.500.50-------------------------------------------------------------------------------------------------------------------------------0.50